Datasets:
manufernandezbur
/
tox_nontox_clustered_2025

Dataset card Data Studio Files
xet
Community
1
Unnamed: 0
int64
2
562k
Entry
stringlengths
6
10
Sequence
stringlengths
11
999
Protein names
stringlengths
5
558
Organism
stringclasses
392 values
Organism (ID)
int64
595
2.89M
Length
int64
11
999
Mass
int64
1.06k
118k
Keywords
stringlengths
4
380
⌀
Gene Ontology IDs
stringlengths
10
754
⌀
Protein existence
stringclasses
5 values
Annotation
float64
1
5
Subcellular location [CC]
stringlengths
30
2.26k
⌀
Signal peptide
stringclasses
677 values
Transmembrane
stringlengths
32
2.52k
⌀
Pfam
stringlengths
8
72
⌀
InterPro
stringlengths
10
180
⌀
PDB
stringlengths
5
2.65k
⌀
Taxonomic lineage
stringclasses
178 values
Gene Names
stringlengths
2
299
⌀
Toxin
bool
2 classes
species
stringclasses
111 values
cdhit_cluster
int64
0
4.65k
cdhit_rep
stringlengths
5
10
cdhit_rep_is_ref
bool
1 class
cdhit_pct_id
float64
98,589
Q8ZPP9
MNRTNQLILGAVVLGSTLLAGCSSNAKIDQLSSDVQTLSAKVEQLSNDVNAMRSDVQAAKDDAARANQRLDNKVFRICK
Major outer membrane lipoprotein Lpp 2 (Braun lipoprotein 2) (BLP 2) (Murein lipoprotein 2)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
79
8,492
Cell outer membrane;Cell wall;Coiled coil;Lipoprotein;Membrane;Palmitate;Peptidoglycan-anchor;Reference proteome;Repeat;Secreted;Signal;Virulence
GO:0005576; GO:0008289; GO:0009279; GO:0030258; GO:0042834; GO:0043580
Inferred from homology
4
SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-Rule:MF_00843}; Lipid-anchor {ECO:0000255|HAMAP-Rule:MF_00843}; Periplasmic side {ECO:0000255|HAMAP-Rule:MF_00843}. Secreted, cell wall {ECO:0000255|HAMAP-Rule:MF_00843}; Peptidoglycan-anchor {ECO:0000255|HAMAP-Rule:MF_00843}. Note=Attached via its lipidated N-terminus to the inner leaflet of the outer membrane. Attached to the peptidoglycan network (PGN) via its C-terminus. {ECO:0000255|HAMAP-Rule:MF_00843}.
SIGNAL 1..21; /evidence="ECO:0000255|HAMAP-Rule:MF_00843"
null
PF04728;
IPR006817;IPR016367;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
lpp2 lppB STM1376
false
Salmonella enterica
1,900
row_87755
false
null
140,500
A9MJR4
MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA
ATP synthase subunit c (ATP synthase F(0) sector subunit c) (F-type ATPase subunit c) (F-ATPase subunit c) (Lipid-binding protein)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
79
8,256
ATP synthesis;Cell inner membrane;Cell membrane;CF(0);Hydrogen ion transport;Ion transport;Lipid-binding;Membrane;Reference proteome;Transmembrane;Transmembrane helix;Transport
GO:0005886; GO:0008289; GO:0033177; GO:0045259; GO:0046933
Inferred from homology
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_01396}; Multi-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_01396}.
null
TRANSMEM 11..31; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01396"; TRANSMEM 53..73; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01396"
PF00137;
IPR005953;IPR000454;IPR020537;IPR038662;IPR002379;IPR035921;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
atpE SARI_03781
false
Salmonella enterica
1,901
row_128381
false
null
353,938
A9MI38
MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLAQEVQSAQHQREELERENNSLKEQQSGWQERLQALLGRMEEV
Cell division protein ZapB
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
79
9,282
Cell cycle;Cell division;Coiled coil;Cytoplasm;Reference proteome;Septation
GO:0000917; GO:0005737; GO:0043093
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm. Note=Localizes to the septum at mid-cell, in a FtsZ-like pattern. {ECO:0000255|HAMAP-Rule:MF_01196}.
null
null
PF06005;
IPR009252;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
zapB SARI_03569
false
Salmonella enterica
1,902
row_336985
false
null
409,372
P0A1G3
MFVELVYDKRNVEGLPGAREIILNELTKRVHQLFPDAQVKVKPMQANALNSDCTKTEKERLHRMLEEMFEEADMWLVAE
Virulence protein MsgA
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
79
9,275
Reference proteome;Virulence
null
Inferred from homology
2
null
null
null
PF06183;
IPR036687;IPR010391;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
msgA STM1241
false
Salmonella enterica
1,903
row_391831
false
null
423,985
P58651
MNEAVLLGEGFTLMFLGMGFVLSFLFLLIFAIRGMSAVITRFFPEPVAAPAPRAVPVVDDFTRLKPVIAAAIHHHRHHV
Oxaloacetate decarboxylase gamma chain 1 (EC 7.2.4.2)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
79
8,726
Cell membrane;Ion transport;Membrane;Reference proteome;Sodium;Sodium transport;Translocase;Transmembrane;Transmembrane helix;Transport
GO:0005886; GO:0008948; GO:0015081; GO:0015451; GO:0036376
Inferred from homology
2
SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Single-pass membrane protein {ECO:0000250}.
null
TRANSMEM 12..32; /note="Helical"; /evidence="ECO:0000250"
PF04277;
IPR005899;IPR023424;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
oadG1 STM0056
false
Salmonella enterica
1,904
row_406106
false
null
552,971
Q57NG8
MRLIIRAIVLFALVWIGLLMSGYGILVGSKVNAAGLGLQCHYLTARGTSTAQYLHTNSGIIGFSDCPIFRKIATVVDNG
Uncharacterized protein YobH
Salmonella choleraesuis (strain SC-B67)
321,314
79
8,439
Signal
null
Inferred from homology
1
null
SIGNAL 1..33; /evidence="ECO:0000255"
null
PF13996;
IPR025611;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella enterica subsp. enterica serovar Choleraesuis (no rank)
yobH SCH_1837
false
Salmonella enterica
1,905
row_533005
false
null
553,843
Q5J3W6
MRMSEYFRILQGLPDGSFTREQAEAVAAQYRNVFIEDDQGTHFRLVVRQDGTLIWRSWNFEDCAGYWMNQYIRDFGILK
UPF0401 protein YubL
Salmonella choleraesuis (strain SC-B67)
321,314
79
9,459
Plasmid
null
Inferred from homology
1
null
null
null
PF06006;
IPR009253;IPR038612;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella enterica subsp. enterica serovar Choleraesuis (no rank)
yubL SCH_119
false
Salmonella enterica
1,906
row_533871
false
null
94,077
Q7CQN4
MNRTKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNQATKYRK
Major outer membrane lipoprotein Lpp 1 (Braun lipoprotein 1) (BLP 1) (Murein lipoprotein 1)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
78
8,391
Cell outer membrane;Cell wall;Coiled coil;Lipoprotein;Membrane;Palmitate;Peptidoglycan-anchor;Reference proteome;Repeat;Secreted;Signal;Virulence
GO:0005576; GO:0008289; GO:0009279; GO:0030258; GO:0042834; GO:0043580
Inferred from homology
4
SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-Rule:MF_00843}; Lipid-anchor {ECO:0000255|HAMAP-Rule:MF_00843}; Periplasmic side {ECO:0000255|HAMAP-Rule:MF_00843}. Secreted, cell wall {ECO:0000255|HAMAP-Rule:MF_00843}; Peptidoglycan-anchor {ECO:0000255|HAMAP-Rule:MF_00843}. Note=Attached via its lipidated N-terminus to the inner leaflet of the outer membrane. Attached to the peptidoglycan network (PGN) via its C-terminus. {ECO:0000255|HAMAP-Rule:MF_00843}.
SIGNAL 1..20; /evidence="ECO:0000255|HAMAP-Rule:MF_00843"
null
PF04728;
IPR006817;IPR016367;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
lpp1 lppA STM1377
false
Salmonella enterica
1,907
row_83572
false
null
190,652
P0A6B1
MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA
Acyl carrier protein (ACP) (Cytosolic-activating factor) (CAF) (Fatty acid synthase acyl carrier protein)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
78
8,640
Cytoplasm;Fatty acid biosynthesis;Fatty acid metabolism;Lipid biosynthesis;Lipid metabolism;Phosphopantetheine;Phosphoprotein;Reference proteome
GO:0000035; GO:0000036; GO:0005829; GO:0009245; GO:0016020
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01217}.
null
null
PF00550;
IPR003231;IPR036736;IPR009081;IPR006162;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
acpP STM1196
false
Salmonella enterica
1,908
row_177495
false
null
354,032
A9MMB8
MASLIQVRDLLALRGRMEATQISHTLRAPQPMIDAMLNQLEIMGKAVRIPEEADGCLSGSCKRCPEGKACLREWWVLR
Probable [Fe-S]-dependent transcriptional repressor
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
78
8,764
DNA-binding;Iron;Iron-sulfur;Metal-binding;Reference proteome;Repressor;Transcription;Transcription regulation
GO:0003677; GO:0005506; GO:0051536
Inferred from homology
2
null
null
null
PF09012;
IPR023732;IPR015102;IPR036388;IPR036390;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
feoC SARI_04108
false
Salmonella enterica
1,909
row_337077
false
null
373,573
B4SXD9
MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRIIDKKGIETVLSELRARGEKY
Large ribosomal subunit protein bL28 (50S ribosomal protein L28)
Salmonella newport (strain SL254)
423,368
78
9,051
Ribonucleoprotein;Ribosomal protein
GO:0003735; GO:0006412; GO:0022625
Inferred from homology
2
null
null
null
PF00830;
IPR026569;IPR034704;IPR001383;IPR037147;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella newport (no rank)
rpmB SNSL254_A4008
false
Salmonella enterica
1,910
row_356334
false
null
561,054
Q9L5N1
MSDLFSSESPVTLAQARTVAAGYQNVFIENLQPAGHFQIVIRDHRDHDSQLVWRNWNYESGANDALNSYLQSHGLKAS
UPF0401 protein YubL
Salmonella typhi
90,370
78
8,775
Plasmid
null
Inferred from homology
1
null
null
null
PF06006;
IPR009253;IPR038612;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
yubL HCM1.279bc R0111 HCM1.279.2c
false
Salmonella enterica
1,911
row_541030
false
null
539,575
P0AA34
MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCPQSINNIPLDARNHGYTVLDIQQDGPTIRYLIQK
Putative sulfur carrier protein YedF
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
77
8,639
Reference proteome
null
Inferred from homology
1
null
null
null
PF01206;
IPR001455;IPR036868;IPR049570;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
yedF STM1966
false
Salmonella enterica
1,912
row_519864
false
null
542,718
P40824
MSETRIDRMSNIKSYISNQKNIIQHDDFFGRRLDIALCFDHGFIMPAGVAIYSIIENNKDIDYALKQKERCQVKITL
Uncharacterized protein YibR
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
77
8,995
Reference proteome
null
Predicted
1
null
null
null
null
null
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
yibR STM3720
false
Salmonella enterica
1,913
row_522975
false
null
560,558
Q9FA32
MLRINVCFDASKKVPAKIQQALRAEIEKEILSNYERGVVSVGKGSSAEVSISGVDDDEKKVIMQKLEDIWQSDSWLP
Protein ImpC
Salmonella typhimurium
90,371
77
8,608
DNA damage;DNA repair;Plasmid
GO:0006281; GO:0009432
Inferred from homology
1
null
null
null
PF06183;
IPR036687;IPR010391;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
impC
false
Salmonella enterica
1,914
row_540535
false
null
315,267
A0A0H3NGF1
MDQLYMTVQDYLLKFRKISSLESLEKLFDHLNYTLTDDMDIVNMYRAADHRRAELVSGGRLFDVGQVPQSVWRYVQ
Transcription modulator YdgT (H-NS/StpA-binding protein 2) (OriC-binding nucleoid-associated protein)
Salmonella typhimurium (strain SL1344)
216,597
76
9,031
Transcription;Transcription regulation;Virulence
null
Inferred from homology
2
null
null
null
PF05321;
IPR007985;IPR036666;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
ydgT cnu SL1344_1393
false
Salmonella enterica
1,915
row_298710
false
null
435,138
Q05459
MRTVSIFKNGNNRAIRLPRDLDFEGVSELEIVREGDSIILRPVRPTWGSFAQLEKADPDFMAEREDVVSDEGRFEL
Virulence-associated protein VagC
Salmonella dublin
98,360
76
8,738
DNA-binding;Plasmid;Virulence
GO:0003677
Inferred from homology
2
null
null
null
PF04014;
IPR047976;IPR007159;IPR037914;IPR051734;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
vagC
false
Salmonella enterica
1,916
row_416846
false
null
200,941
P40819
MFMRTVNYSEARQNLAEVLESAVTGGPVTITRRGHKSAVIISAEEFERYQTARMDDEFAAIMAVHGNELRELADK
Orphan antitoxin YefM
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
75
8,431
Reference proteome;Toxin-antitoxin system
GO:0000976; GO:0001217; GO:0003700; GO:0006355; GO:0032993; GO:0043565
Inferred from homology
3
null
null
null
PF02604;
IPR006442;IPR051405;IPR036165;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
yefM yhhV STM3559
false
Salmonella enterica
1,917
row_187485
false
null
353,865
A9MFK9
MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPYTDRHQ
Small ribosomal subunit protein bS18 (30S ribosomal protein S18)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
75
8,986
Reference proteome;Ribonucleoprotein;Ribosomal protein;RNA-binding;rRNA-binding
GO:0003735; GO:0006412; GO:0022627; GO:0070181
Inferred from homology
2
null
null
null
PF01084;
IPR001648;IPR018275;IPR036870;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
rpsR SARI_03239
false
Salmonella enterica
1,918
row_336912
false
null
495,847
Q7CPV2
MHTTLFFSNRTQAVRLPKSISFPEDVKHVEIIAVGRSRIITPVGESWDSWFDGEGASTDFMSTREQPAVQEREGF
Antitoxin VapB
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
75
8,515
3D-structure;DNA-binding;Reference proteome;Toxin-antitoxin system
GO:0003677
Evidence at protein level
2
null
null
null
null
IPR047976;IPR007159;IPR037914;IPR051734;
6IFM;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
vapB STM3034
false
Salmonella enterica
1,919
row_476629
false
null
531,477
A9MK24
MPQLSRYSDEHVEQLLSDLLSVLEKHKAPTDLSLMVLGNMVTNLINTSVAPAQRQAIANSFTRALQSSISEDKAH
UPF0352 protein YejL
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
75
8,261
Reference proteome
null
Inferred from homology
1
null
null
null
PF07208;
IPR009857;IPR023202;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
yejL SARI_00660
false
Salmonella enterica
1,920
row_511810
false
null
540,947
P14500
MCIAQYIYVRLAVNLPTPETYDELQRAYDFFNEKLFSNELPPCLITLQREKRTYGYCSFKRFVGRESGYTVDEI
Uncharacterized protein in mucB 3'region
Salmonella typhimurium
90,371
74
8,815
Plasmid
null
Predicted
1
null
null
null
null
null
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
null
false
Salmonella enterica
1,921
row_521221
false
null
276,822
Q7CR17
MSDKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR
Hemolysin expression-modulating protein Hha
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
72
8,614
3D-structure;Reference proteome;Transcription;Transcription regulation
null
Evidence at protein level
3
null
null
null
PF05321;
IPR007985;IPR036666;
4ICG;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
hha STM0473
false
Salmonella enterica
1,922
row_261211
false
null
353,933
A9MI00
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
Translation initiation factor IF-1
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
72
8,250
Cytoplasm;Initiation factor;Protein biosynthesis;Reference proteome;RNA-binding;rRNA-binding
GO:0003743; GO:0005829; GO:0019843; GO:0043022
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00075}.
null
null
PF01176;
IPR012340;IPR006196;IPR003029;IPR004368;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
infA SARI_02010
false
Salmonella enterica
1,923
row_336980
false
null
419,088
P37723
MFMTSKKMAAAVLAITVAMSLSACSNWSKRDRNTAIGAGAGALGGAVLTDGSTLGTLGGAAVGGVIGHQVGK
Osmotically-inducible lipoprotein B
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
72
6,936
Cell membrane;Lipoprotein;Membrane;Palmitate;Reference proteome;Signal
GO:0005886; GO:0019867
Evidence at transcript level
2
SUBCELLULAR LOCATION: Cell membrane {ECO:0000255|PROSITE-ProRule:PRU00303}; Lipid-anchor {ECO:0000255|PROSITE-ProRule:PRU00303}.
SIGNAL 1..23; /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
null
PF05433;
IPR008816;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
osmB STM1705
false
Salmonella enterica
1,924
row_401296
false
null
531,484
A9MN11
MIVPWQGLSPDTLDNLIESFVLREGTDYGEHERSLEQKVADVKRQLQSGEAVLVWSELHETVNIMPKKQFRD
UPF0270 protein YheU
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
72
8,338
Reference proteome
null
Inferred from homology
1
null
null
null
PF06794;
IPR010648;IPR036685;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
yheU SARI_04152
false
Salmonella enterica
1,925
row_511817
false
null
531,485
A9MN31
MQDITMEARLAELESRLAFQEITIEELNLTVTAHEMEMAKLRDHLRLLTEKLKASQPSNIASQAEETPPPHY
Protein SlyX
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
72
8,260
Reference proteome
null
Inferred from homology
1
null
null
null
PF04102;
IPR007236;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
slyX SARI_04172
false
Salmonella enterica
1,926
row_511818
false
null
181,481
H9L4C5
MDIAQLVDMLSHMAHQAGQAINDKMNGNDLLNPESMIKAQFALQQYSTFINYESSLIKMIKDMLSGIIAKI
SPI-2 type 3 secretion system needle filament protein (T3SS-2 needle filament protein)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
71
7,944
Protein transport;Reference proteome;Secreted;Transport;Virulence
GO:0005576; GO:0009986; GO:0030254; GO:0030257
Evidence at protein level
3
SUBCELLULAR LOCATION: Secreted {ECO:0000250|UniProtKB:P41784}. Cell surface {ECO:0000250|UniProtKB:P41784}.
null
null
PF09392;
IPR021123;IPR037203;IPR011841;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
sctF2 ssaG STM1406
false
Salmonella enterica
1,927
row_168536
false
null
354,118
A9MPV4
MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKLARENARRTRLY
Small ribosomal subunit protein bS21 (30S ribosomal protein S21)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
71
8,500
Reference proteome;Ribonucleoprotein;Ribosomal protein
GO:0003735; GO:0005840; GO:0006412; GO:1990904
Inferred from homology
2
null
null
null
PF01165;
IPR001911;IPR018278;IPR038380;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
rpsU SARI_04420
false
Salmonella enterica
1,928
row_337163
false
null
539,431
P0A214
MKMLFPALPGLLLIASGYGIAEQTLLPVAQNSRDVMLLPCVGDPPNDLHPVSVNSDKSDELGVPYYNDQHL
Multiple antibiotic resistance protein MarB
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
71
7,690
Antibiotic resistance;Reference proteome
GO:0046677
Predicted
1
null
null
null
PF13999;
IPR025732;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
marB STM1518
false
Salmonella enterica
1,929
row_519720
false
null
544,816
P65641
MFTYHSANTSAAQPALVNAIEQGLRAELGVVTEDDILMELTKWVEASDNDILSDIYQQTINYVVSGQHPTL
Protein bdm homolog
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
71
7,838
Reference proteome
null
Predicted
1
null
null
null
PF10684;
IPR019625;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
bdm STM1564
false
Salmonella enterica
1,930
row_525058
false
null
354,339
A9MZI7
MKKGIHPNYVEITATCSCGNVIKTHSTVGHDLNLDVCGKCHPFFTGKQRVVDTGGRVERFNKRFSIPGSK
Large ribosomal subunit protein bL31 (50S ribosomal protein L31)
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
70
7,719
Metal-binding;Ribonucleoprotein;Ribosomal protein;RNA-binding;rRNA-binding;Zinc
GO:0003735; GO:0005840; GO:0006412; GO:0019843; GO:0046872; GO:1990904
Inferred from homology
2
null
null
null
PF01197;
IPR034704;IPR002150;IPR027491;IPR042105;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
rpmE SPAB_05074
false
Salmonella enterica
1,931
row_337384
false
null
401,606
E1WGN1
MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSVEQGPKGPSAVNVVAL
Cold shock-like protein CspJ
Salmonella typhimurium (strain SL1344)
216,597
70
7,745
Activator;Cytoplasm;DNA-binding;Stress response;Transcription;Transcription regulation
GO:0003677; GO:0005829
Evidence at transcript level
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
null
null
PF00313;
IPR012156;IPR050181;IPR011129;IPR019844;IPR002059;IPR012340;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
cspJ cspB cspG SL1344_1924
false
Salmonella enterica
1,932
row_384182
false
null
409,364
P0A1D9
MSRKMTGIVKTFDCKSGKGLITPSDGRKDVQVHISACRQHETEALIPGIRVEFCRINGLRGPTAANVYLS
Cold shock-like protein CspH
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
70
7,660
Activator;Cytoplasm;DNA-binding;Reference proteome;Transcription;Transcription regulation
GO:0003676; GO:0003677; GO:0005829; GO:0010468
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
null
null
PF00313;
IPR012156;IPR050181;IPR011129;IPR019844;IPR002059;IPR012340;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
cspH STM1243
false
Salmonella enterica
1,933
row_391823
false
null
409,435
P0A1T4
MTKPTKDDELYREMCRVVGKVVLEMRDLGQEPKYIVIAGVLRTALANQRIQRSALEKQAMETVINALARS
Fumarase D (EC 4.2.1.2)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
70
7,947
Lyase;Reference proteome
GO:0004333
Inferred from homology
2
null
null
null
PF10965;
IPR024493;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
fumD ydhZ STM1388
false
Salmonella enterica
1,934
row_391894
false
null
410,481
P0A9Y2
MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL
Cold shock protein CspA (CSP-A) (7.4 kDa cold shock protein) (CS7.4)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
70
7,403
Activator;Cytoplasm;DNA-binding;Reference proteome;Stress response;Transcription;Transcription regulation
GO:0003676; GO:0003677; GO:0005829; GO:0010468
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
null
null
PF00313;
IPR012156;IPR050181;IPR011129;IPR019844;IPR002059;IPR012340;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
cspA STM3649
false
Salmonella enterica
1,935
row_392937
false
null
556,887
Q7CPB2
MMNKDEAGGNWKQFKGKMKEQWGKLTDDDMTVIEGKRDQLVGKIQERYGYQKDQAEKEVVDWETRNNYRW
UPF0337 protein YjbJ
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
70
8,459
Reference proteome
null
Inferred from homology
1
null
null
null
PF05532;
IPR008462;IPR050423;IPR026042;IPR036629;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
yjbJ STM4240
false
Salmonella enterica
1,936
row_536890
false
null
410,487
P0A9Y9
MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNVTAI
Cold shock-like protein CspC (CSP-C)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
69
7,402
Activator;Cytoplasm;DNA-binding;Reference proteome;Transcription;Transcription regulation
GO:0003676; GO:0003677; GO:0005829; GO:0010468
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
null
null
PF00313;
IPR012156;IPR050181;IPR011129;IPR019844;IPR002059;IPR012340;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
cspC STM1837
false
Salmonella enterica
1,937
row_392943
false
null
414,600
P12059
MSGNIGANPIGKKVNISCSLDEAIDELLMESALKSGWSKKREAELRLEDHLRRFSLVPAEEQYIEKKVD
Relaxosome protein TraY
Salmonella typhi
90,370
69
7,788
Conjugation;Cytoplasm;DNA-binding;Plasmid
GO:0003677; GO:0005737
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
null
null
PF05509;
IPR008876;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
traY
false
Salmonella enterica
1,938
row_396930
false
null
552,949
Q57IE4
MAKIGENVPLLIDKAVDFMASSQAFREYLNKTPPRDYVPSEVPSESAPIYLQRLEYYRRLYRPKEEERG
Uncharacterized protein YibT
Salmonella choleraesuis (strain SC-B67)
321,314
69
8,123
null
GO:0003677; GO:0003887; GO:0006260
Predicted
1
null
null
null
null
IPR036745;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella enterica subsp. enterica serovar Choleraesuis (no rank)
yibT SCH_3612
false
Salmonella enterica
1,939
row_532983
false
null
353,989
A9MKE5
MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGTAIKGFKKAMNDEDVGVKKDVDGGVQAEKLSHKE
Probable Sec-independent protein translocase protein TatE
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
67
7,082
Cell inner membrane;Cell membrane;Membrane;Protein transport;Reference proteome;Translocation;Transmembrane;Transmembrane helix;Transport
GO:0008320; GO:0033281; GO:0043953
Inferred from homology
2
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_00903}; Single-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_00903}.
null
TRANSMEM 4..21; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00903"
PF02416;
IPR003369;IPR006312;IPR024905;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
tatE SARI_02301
false
Salmonella enterica
1,940
row_337036
false
null
409,437
P0A1T6
MKNVFKTLAVLLTLFSLTGCGLKGPLYFPPADKNAPPPTKKVDSQTQSTMPDKNDRATGDGPSQVNY
LPS-assembly lipoprotein LptM
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
67
7,212
Cell outer membrane;Lipoprotein;Membrane;Palmitate;Reference proteome;Signal
GO:0009279
Inferred from homology
2
SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000250|UniProtKB:P0ADN6}; Lipid-anchor {ECO:0000255|PROSITE-ProRule:PRU00303}.
SIGNAL 1..19; /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
null
PF13627;
IPR032831;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
lptM yifL STM3946 STMD1.100
false
Salmonella enterica
1,941
row_391896
false
null
414,208
P0DV90
MENGFVNFYDHVKGYGFIRRERGRDVFFRYDDFLFLGHDVDICKGILVRFKLEKTDKGFKAVAIQKV
Retron Se72 cold shock-like protein
Salmonella heidelberg (strain 579083-10)
1,054,962
67
7,966
Antiviral defense
GO:0003676; GO:0051607
Evidence at protein level
2
null
null
null
PF00313;
IPR012156;IPR002059;IPR012340;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella enterica subsp. enterica serovar Heidelberg (no rank)
Ga0072986_12845 SEEH8310_20094
false
Salmonella enterica
1,942
row_396546
false
null
423,972
P58614
MNNNNVYSLNNFDFLARSFARMQAEGRPVDIQAVTGNMDEEHRDWFCKRYALYCQQATQAKRLELEH
Surface composition regulator
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
67
7,957
Reference proteome
GO:1900191; GO:1902201
Inferred from homology
2
null
null
null
PF08971;
IPR015065;IPR036295;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
glgS STM3197
false
Salmonella enterica
1,943
row_406093
false
null
531,488
A9MNW8
MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRVLVPTGIYDFVWHPALFNTALYCCLFYLISRLFV
Protein AaeX
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
67
7,847
Cell membrane;Membrane;Reference proteome;Transmembrane;Transmembrane helix
GO:0005886
Inferred from homology
1
SUBCELLULAR LOCATION: Cell membrane {ECO:0000255|HAMAP-Rule:MF_01546}; Multi-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_01546}.
null
TRANSMEM 3..23; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01546"; TRANSMEM 43..63; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01546"
PF07869;
IPR012451;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
aaeX SARI_04267
false
Salmonella enterica
1,944
row_511821
false
null
353,919
A9MHQ7
MDWLAKYWWILVLVFLVGVLLNVIKDLKRIDHKKFLANKPELPPHRDFNDKWDDEDDWPKKDQSKK
UPF0370 protein YpfN
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
66
8,089
Cell membrane;Membrane;Reference proteome;Transmembrane;Transmembrane helix
GO:0005886
Inferred from homology
2
SUBCELLULAR LOCATION: Cell membrane {ECO:0000255|HAMAP-Rule:MF_01566}; Single-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_01566}.
null
TRANSMEM 4..24; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01566"
PF13980;
IPR020910;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
ypfN SARI_00398
false
Salmonella enterica
1,945
row_336966
false
null
531,523
A9N0U3
MEKYCELVRKRYAEIASGDLGYVPDALGCVLKVLNEVAADSALSESVREKAAYAAANLLVSDYVNE
UPF0253 protein YaeP
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
66
7,156
null
null
Inferred from homology
1
null
null
null
PF06786;
IPR009624;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
yaeP SPAB_00304
false
Salmonella enterica
1,946
row_511856
false
null
353,860
A9MFC1
MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDLGLVIACLPYA
Large ribosomal subunit protein bL35 (50S ribosomal protein L35)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
65
7,289
Reference proteome;Ribonucleoprotein;Ribosomal protein
GO:0003735; GO:0006412; GO:0022625
Inferred from homology
2
null
null
null
PF01632;
IPR001706;IPR021137;IPR018265;IPR037229;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
rpmI SARI_01635
false
Salmonella enterica
1,947
row_336907
false
null
409,458
P0A1Z6
MYVCLCNGISDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIRAAREVMQDELTQMPEFKEIA
Bacterioferritin-associated ferredoxin
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
64
7,459
2Fe-2S;Electron transport;Iron;Iron-sulfur;Metal-binding;Reference proteome;Transport
GO:0046872; GO:0051537
Inferred from homology
2
null
null
null
PF04324;
IPR052371;IPR007419;IPR041854;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
bfd STM3444
false
Salmonella enterica
1,948
row_391917
false
null
531,482
A9MMJ6
MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGIMYLVSLEDYPLGIWFFNESGHQDGIFVEKAEQD
Protein DsrB
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
64
7,217
Reference proteome
null
Inferred from homology
1
null
null
null
PF10781;
IPR019717;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
dsrB SARI_00954
false
Salmonella enterica
1,949
row_511815
false
null
354,052
A9MN56
MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLTEKAGA
Large ribosomal subunit protein uL29 (50S ribosomal protein L29)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
63
7,260
Reference proteome;Ribonucleoprotein;Ribosomal protein
GO:0003735; GO:0006412; GO:0022625
Inferred from homology
2
null
null
null
PF00831;
IPR050063;IPR001854;IPR018254;IPR036049;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
rpmC SARI_04197
false
Salmonella enterica
1,950
row_337097
false
null
354,125
A9MQA6
MSDVTVVSCPTCGKPVVWGEVSPFRPFCSKRCQLIDLGEWAAEEKRIASSGDLSDSDDWSEER
DNA gyrase inhibitor YacG
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
63
6,994
Metal-binding;Reference proteome;Zinc
GO:0006355; GO:0008270; GO:0008657
Inferred from homology
2
null
null
null
PF03884;
IPR005584;IPR013088;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
yacG SARI_02857
false
Salmonella enterica
1,951
row_337170
false
null
495,834
Q7CPI8
MMTISDIVQIILFCALIFFPLGYLARHSLRRISDTTRLLFAKPRYVKPAGTLRRATKVKADKK
Cellulose biosynthesis protein BcsF
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
63
7,252
Cell inner membrane;Cell membrane;Cellulose biosynthesis;Membrane;Reference proteome;Transmembrane;Transmembrane helix
GO:0005886; GO:0030244
Inferred from homology
2
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
null
TRANSMEM 4..24; /note="Helical"; /evidence="ECO:0000255"
PF11120;
IPR019995;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
bcsF STM3623
false
Salmonella enterica
1,952
row_476616
false
null
209,026
P69917
MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKSQQSSY
Translational regulator CsrA (Carbon storage regulator)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
61
6,856
Activator;Cytoplasm;Reference proteome;Repressor;RNA-binding;Translation regulation
GO:0005829; GO:0006109; GO:0006402; GO:0045947; GO:0045948; GO:0048027
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00167}.
null
null
PF02599;
IPR003751;IPR036107;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
csrA zfiA STM2826
false
Salmonella enterica
1,953
row_195427
false
null
531,474
A9MHW6
MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPVLLENEARSLTSDESKS
UPF0434 protein YcaR
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
60
6,872
Reference proteome
GO:0005829
Inferred from homology
1
null
null
null
PF03966;
IPR005651;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
ycaR SARI_01975
false
Salmonella enterica
1,954
row_511807
false
null
354,062
A9MN67
MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAVRGMVNAVSFMVKVEE
Large ribosomal subunit protein uL30 (50S ribosomal protein L30)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
59
6,514
Reference proteome;Ribonucleoprotein;Ribosomal protein
GO:0003735; GO:0006412; GO:0022625
Inferred from homology
2
null
null
null
PF00327;
IPR036919;IPR005996;IPR018038;IPR016082;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
rpmD SARI_04207
false
Salmonella enterica
1,955
row_337107
false
null
531,487
A9MNJ9
MFAGLPSLSHEQQQKAVERIQELMSQGMSSGEAIAQVAGELRANHTGERIVARFEDEDE
UPF0181 protein YoaH
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
59
6,514
Reference proteome
null
Inferred from homology
1
null
null
null
PF03701;
IPR005371;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
yoaH SARI_01116
false
Salmonella enterica
1,956
row_511820
false
null
531,512
A9MWU4
MSDIEAQRIAARIDTVLDILVAGDYHSAINNLEILRAELLDQVKDGISPSQAPGSPWEI
UPF0509 protein YciZ
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
59
6,430
null
null
Inferred from homology
1
null
null
null
PF23675;
IPR020887;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
yciZ SPAB_01549
false
Salmonella enterica
1,957
row_511845
false
null
353,882
A9MGD1
MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIAK
Large ribosomal subunit protein bL32 (50S ribosomal protein L32)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
57
6,446
Reference proteome;Ribonucleoprotein;Ribosomal protein
GO:0003735; GO:0006412; GO:0015934
Inferred from homology
2
null
null
null
PF01783;
IPR002677;IPR044957;IPR011332;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
rpmF SARI_01807
false
Salmonella enterica
1,958
row_336929
false
null
544,483
P64267
MNSEELTHKAEEEIAALISKKVAELRKKTGQEVSEIEFAPRETMKGLEGYHVKIKLL
Protein gns
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
57
6,483
Reference proteome
null
Inferred from homology
1
null
null
null
PF08178;
IPR012563;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
gns STM1809
false
Salmonella enterica
1,959
row_524726
false
null
353,998
A9MKN8
MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK
Large ribosomal subunit protein bL33 (50S ribosomal protein L33)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
55
6,372
Reference proteome;Ribonucleoprotein;Ribosomal protein
GO:0003735; GO:0006412; GO:0022625
Inferred from homology
2
null
null
null
PF00471;
IPR001705;IPR018264;IPR038584;IPR011332;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
rpmG SARI_03913
false
Salmonella enterica
1,960
row_337045
false
null
542,405
P37771
MKKLTDKQKSRFWEQRRNVNFQQSRRLEGIEIPLVTLTADEALVRLDELRRHYER
Uncharacterized protein YhfG
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
55
6,799
Reference proteome
null
Predicted
1
null
null
null
PF10832;
IPR022541;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
yhfG STM3471
false
Salmonella enterica
1,961
row_522667
false
null
479,534
Q5PK28
MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIVLFLVSLFMGRKRP
UPF0391 membrane protein YtjA
Salmonella paratyphi A (strain ATCC 9150 / SARB42)
295,319
53
5,522
Cell membrane;Membrane;Transmembrane;Transmembrane helix
GO:0005886
Inferred from homology
2
SUBCELLULAR LOCATION: Cell membrane {ECO:0000255|HAMAP-Rule:MF_01361}; Multi-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_01361}.
null
TRANSMEM 4..24; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01361"; TRANSMEM 30..48; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01361"
PF07043;
IPR009760;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi A (no rank)
ytjA SPA4376
false
Salmonella enterica
1,962
row_460616
false
null
354,076
A9MNI4
MKKFRWVVLGIVVVVCLLLWAQVFNIMCDQDVQFFSGICAINKFIPW
PhoP/PhoQ regulator MgrB
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
47
5,520
Cell inner membrane;Cell membrane;Membrane;Reference proteome;Transmembrane;Transmembrane helix
GO:0005886; GO:0070298
Inferred from homology
2
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_01596}; Single-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_01596}.
null
TRANSMEM 6..26; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01596"
PF13998;
IPR020907;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
mgrB SARI_01101
false
Salmonella enterica
1,963
row_337121
false
null
473,708
Q57P89
MKSNRQARHILGLDYRISNQRKVVTEGDTSSVVNNPTGRKRRADSQK
Stationary-phase-induced ribosome-associated protein (SRA) (30S ribosomal protein S22)
Salmonella choleraesuis (strain SC-B67)
321,314
47
5,369
null
GO:0006412
Inferred from homology
2
null
null
null
PF08136;
IPR012607;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella enterica subsp. enterica serovar Choleraesuis (no rank)
sra rpsV SCH_1566
false
Salmonella enterica
1,964
row_454860
false
null
353,976
A9MJT9
MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK
Large ribosomal subunit protein bL34 (50S ribosomal protein L34)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
46
5,380
Reference proteome;Ribonucleoprotein;Ribosomal protein
GO:0003735; GO:0005840; GO:0006412; GO:1990904
Inferred from homology
2
null
null
null
PF00468;
IPR000271;IPR020939;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
rpmH SARI_03806
false
Salmonella enterica
1,965
row_337023
false
null
354,263
A9MWA7
MQVLNSLRNAKQRHPDCQIVKRKGRLYVICKTNPRFKAVQGRKKRR
Large ribosomal subunit protein bL36 (50S ribosomal protein L36)
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
46
5,521
Ribonucleoprotein;Ribosomal protein
GO:0003735; GO:0005840; GO:0006412; GO:1990904
Inferred from homology
2
null
null
null
PF00444;
IPR000473;IPR035977;IPR047621;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
rpmJ SPAB_03104
false
Salmonella enterica
1,966
row_337308
false
null
472,864
Q56178
DKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAK
Major cold shock protein
Salmonella virchow
48,409
46
4,983
Activator;Cytoplasm;DNA-binding;Stress response;Transcription;Transcription regulation
GO:0003677; GO:0005829
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
null
null
PF00313;
IPR012156;IPR011129;IPR019844;IPR002059;IPR012340;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
cspA
false
Salmonella enterica
1,967
row_454027
false
null
416,760
P24262
MYRKSTLAMLIALLTSAASAHAQTDISTIEARLNALEKRLQ
Sucrose porin
Salmonella thompson
600
41
4,502
Cell outer membrane;Ion transport;Membrane;Plasmid;Porin;Signal;Sugar transport;Transmembrane;Transmembrane beta strand;Transport
GO:0006811; GO:0009279; GO:0015288; GO:0046930
Inferred from homology
2
SUBCELLULAR LOCATION: Cell outer membrane; Multi-pass membrane protein.
SIGNAL 1..22; /evidence="ECO:0000250"
null
PF11471;
IPR021570;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
scrY
false
Salmonella enterica
1,968
row_399015
false
null
194,063
P0DUM2
MKVRCFCVVLLVSGTLCLHADRSYPGNSVPVTLNVQSR
Toxic protein TimP
Salmonella typhimurium (strain SL1344)
216,597
38
4,164
Cell inner membrane;Cell membrane;Membrane;Toxin-antitoxin system;Transmembrane
GO:0005886
Evidence at transcript level
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000269|PubMed:33172998}; Single-pass membrane protein {ECO:0000305|PubMed:33172998}. Note=The signal sequence is not cleaved and anchors the protein in the cell inner membrane. {ECO:0000305|PubMed:33172998}.
null
TRANSMEM 1..20; /evidence="ECO:0000305|PubMed:33172998"
null
null
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
timP ryfA SL1344_2496.5
false
Salmonella enterica
1,969
row_180788
false
null
410,182
P0A7Q8
MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG
Large ribosomal subunit protein bL36A (50S ribosomal protein L36 1)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
38
4,364
Reference proteome;Ribonucleoprotein;Ribosomal protein
GO:0003735; GO:0005737; GO:0005840; GO:0006412; GO:1990904
Inferred from homology
2
null
null
null
PF00444;
IPR000473;IPR035977;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
rpmJ STM3419
false
Salmonella enterica
1,970
row_392638
false
null
531,544
A9N7H5
MRVAKIGVIALFLLMAIGGIGGVMLAGYSFILRAG
UPF0387 membrane protein YohO
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
35
3,580
Cell inner membrane;Cell membrane;Membrane;Transmembrane;Transmembrane helix
GO:0005886
Inferred from homology
1
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_01362}; Single-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_01362}.
null
TRANSMEM 6..26; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01362"
null
IPR020870;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
yohO SPAB_00859
false
Salmonella enterica
1,971
row_511877
false
null
554,051
Q5PHE1
MYDPPFLEALMITASFFAIFIIIVVSVLLLEGEGD
Uncharacterized protein YoaI
Salmonella paratyphi A (strain ATCC 9150 / SARB42)
295,319
35
3,876
Membrane;Transmembrane;Transmembrane helix
GO:0016020
Predicted
1
SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
null
TRANSMEM 10..30; /note="Helical"; /evidence="ECO:0000255"
null
IPR048191;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi A (no rank)
yoaI SPA1563
false
Salmonella enterica
1,972
row_534079
false
null
73,180
P0DTV8
MENNNRFMPHIRRTTHIMMFAHRNSFDFHFFNAR
Leader peptide SpeFL (Arrest peptide SpeFL)
Salmonella typhimurium (strain SL1344)
216,597
34
4,325
Leader peptide;RNA-binding;rRNA-binding;Transcription;Transcription regulation;Translation regulation
GO:0006448; GO:0019843; GO:0031556
Evidence at protein level
4
null
null
null
PF10940;
IPR021237;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
speFL orf34 SL1344_0683.1
false
Salmonella enterica
1,973
row_64010
false
null
539,427
P0A1W0
MVQCVRHSVLPRLKKDAGLPFFFPLKTNTKPLN
pyr operon leader peptide (pyrBI operon attenuator)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
33
3,797
Leader peptide;Pyrimidine biosynthesis;Reference proteome
GO:0006221; GO:0019856
Predicted
1
null
null
null
PF08052;
IPR012602;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
pyrL STM4461
false
Salmonella enterica
1,974
row_519716
false
null
544,443
P62526
MTALLRVISLVVISVVVIIIPPCGAALGRGKA
ilv operon leader peptide (ilvGMEDA operon attenuator peptide)
Salmonella typhi
90,370
32
3,231
Amino-acid biosynthesis;Branched-chain amino acid biosynthesis;Leader peptide
GO:0008652; GO:0009082
Predicted
1
null
null
null
PF08046;
IPR012567;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
ilvL STY3656.1 t3398 STY3656A
false
Salmonella enterica
1,975
row_524686
false
null
408,116
P03062
MSHIVRFTGLLLLNAFIVRGRPVGGIQH
leu operon leader peptide (leu operon attenuator peptide)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
28
3,103
Amino-acid biosynthesis;Branched-chain amino acid biosynthesis;Leader peptide;Leucine biosynthesis;Reference proteome
GO:0009098
Predicted
2
null
null
null
PF08054;
IPR012570;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
leuL leuLP STM0114
false
Salmonella enterica
1,976
row_390591
false
null
375,269
B5BLG7
MNRISTTTITTITITTGNGAG
thr operon leader peptide (thr operon attenuator)
Salmonella paratyphi A (strain AKU_12601)
554,290
21
2,124
Amino-acid biosynthesis;Leader peptide;Threonine biosynthesis
GO:0009088; GO:0031556
Inferred from homology
2
null
null
null
PF08254;
IPR011720;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi A (no rank)
thrL SSPA0001
false
Salmonella enterica
1,977
row_358016
false
null
192,553
P0CI69
MDPEPTPLPRWRIFLFR
mgtA leader peptide (Regulatory leader peptide for mgtA)
Salmonella typhimurium (strain 14028s / SGSC 2262)
588,858
17
2,172
Leader peptide
null
Evidence at protein level
3
null
null
null
PF17059;
IPR031434;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank), Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (strain)
mgtL STM14_5348.1
false
Salmonella enterica
1,978
row_179351
false
null
544,381
P60997
MTRVQFKHHHHHHHPD
his operon leader peptide (his operon attenuator peptide)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
16
2,081
Amino-acid biosynthesis;Histidine biosynthesis;Leader peptide;Reference proteome
GO:0000105
Inferred from homology
1
null
null
null
PF08047;
IPR012565;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
hisL STM2070.1
false
Salmonella enterica
1,979
row_524624
false
null
408,112
P03054
MAATFALHGWWRTS
trp operon leader peptide
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
14
1,635
Amino-acid biosynthesis;Aromatic amino acid biosynthesis;Leader peptide;Reference proteome;Tryptophan biosynthesis
GO:0000162
Predicted
2
null
null
null
PF08255;
IPR013205;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
trpL trpEE STM1722
false
Salmonella enterica
1,980
row_390587
false
null
539,736
P0AD77
MNAAIFRFFFYFST
Phenylalanyl--tRNA ligase operon leader peptide (pheST attenuator peptide)
Salmonella typhi
90,370
14
1,762
Leader peptide
null
Predicted
1
null
null
null
null
IPR049616;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
pheM STY1774 t1217
false
Salmonella enterica
1,981
row_520025
false
null
559,383
Q8Z5K2
MTRVQFKHHHHPD
his operon leader peptide (his operon attenuator peptide)
Salmonella typhi
90,370
13
1,670
Amino-acid biosynthesis;Histidine biosynthesis;Leader peptide
GO:0000105
Inferred from homology
1
null
null
null
PF08047;
IPR012565;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
hisL STY2279 t0803
false
Salmonella enterica
1,982
row_539366
false
null
101,547
Q9HUI3
MAAGRPGTGCGDHPLLRLSGIPADFLERRPAGPGAGAGAGEAAVRRAGLPGRGGGAGQLAALPARRRRRTGRPDTGLPHARARSRPGVFRRAGAARGGGDLLQPPAAGAHPIPRRPRRLSRRAVVRRKLRGGLRPLRRPPRQRRMGFRQPTELRQAGAPAHRLHRPRTTHRHAVRRAPGRRREHPCAARTADGGLPAGGGLAALAAGGEDGRDRPGPAWLSRRRQHPALAGRQRARLSAPRRQPRGRLVSGHGGVLARRLLWRVLLFSLCFTVLAGAVQLFFEYRREMREIEARLELIRSGYLASFERSLWDLNQEQLNVQLRGLGDFPDIARVSLQSADFNLLQGDQRPRGMLRVERFPLSYQPPGGERRQLGELEIAIDLAAVYRRLVSGGLASLLWMGSFLCGLAVALSWLFHSLVTRHLWRMSEFAGHIAEGDLQQPLRLDKVDRERDEIDAVAAALEDMRQALRTDRRRRDADRDELRRQVERRTASLRRAKDQAEAADRAKSRFLATMSHEIRTPLNGILGMAELLREASLGERDRQRLRALATAGEGLLAILNEVLHFARLEEAPDVPEAVDFSLRSLLEDVLTLLEPRARENATRLDLWLDPQVHDGHRGAEQFLRQVLTNLLGNAVKFTEAGEVRVRVERLARSAGSERLRLSVADDGIGIPEEMRERIFERFTQGGDAVTRRYGGTGLGLAISKRLVEALGGRIGVESRVGQGSTFWFEIELALASLSGATPPAASVSALEVLLVEDVALNREVAQGLLERDGHRVMLAEDAGPALALCRQRRFDLILLDMHLPGMAGLELCAGIRRQLDGLNRATPIFAFTASIQPDMVRRYFAAGMQGVLGKPLRMDELRRALGEVGTSVPALAVDAALDRQMLETHRRLLGRHKLAGLLGNLLGSLDEQLPLLAEALDQADLAEAANIAHRLSGSCHSMGLVALGAGLGELEREALGAAGVDPRAWGARLGSLRRDGAEALRRAGFLGEADSAAG
Sensor histidine kinase AruS (EC 2.7.13.3)
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
208,964
998
109,138
ATP-binding;Cell membrane;Kinase;Membrane;Nucleotide-binding;Phosphoprotein;Reference proteome;Transferase;Transmembrane;Transmembrane helix;Two-component regulatory system
GO:0000155; GO:0005524; GO:0005886; GO:0006527
Inferred from homology
4
SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
null
TRANSMEM 264..284; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 395..415; /note="Helical"; /evidence="ECO:0000255"
PF17149;PF00672;PF02518;PF00512;PF01627;PF00072;
IPR011006;IPR003660;IPR036890;IPR005467;IPR003661;IPR036097;IPR036641;IPR033414;IPR004358;IPR008207;IPR001789;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Pseudomonadales (order), Pseudomonadaceae (family), Pseudomonas (genus), Pseudomonas aeruginosa group (no rank), Pseudomonas aeruginosa (species)
aruS PA4982
false
Pseudomonas aeruginosa
0
row_90539
false
null
305,998
Q9HUF4
MSLPSLANLPATLLPAAERAGTALRSAVAALDAAALARLEAWPEERLEDFRRVAAASDFVAEQAVRDSAMLLELAERGELENPHAPGELRSQLQARLEDCADEDELGRRLRRFRTRQQLRIIWRDLTRRAALAETCRDLSALADACIDLACEWLHRRQCEQFGTPIGRRSGEPQRMVVLGMGKLGAVELNLSSDIDLIFGYPEGGETEGAKRSLDNQEFFTRLGQKLIKALDAITVDGFVFRVDMRLRPYGSSGPLVYSFAALEQYYQDQGRDWERYAMIKARVVGGDQQAGEQLLGMLRPFVYRRYLDFSAIEALRTMKQLIQQEVRRKGMSENIKLGEGGIREVEFIAQAFQLIHGGRDLSLQQRPLLKVLATLEGQGYLPPAVVEELRGGYEFLRYAEHAIQALADRQTQMLPSDEYDRIRVAFIMGFASWAAFHERLSHWRARIDWHFRQVIADPDEDESGEAACGSVGAEWIPLWEEALDEESASRQLADAGFVDAEAAWKRLSDLRHGPQVRAMQRLGRERLDAFVPRLLAMTVENPQPDLVLERVLPLVEAVARRSAYLVLLTENPGALERLLTLCAASPMVAEQIARFPILLDELLNEGRLFRPPQAAELAAELRERLMRIPEDDLEQQMETLRHFKLAHGLRVAASEIAGTLPLMKVSDYLTWLAEAILVEVLELAWRQLVQRHGRPLRADGTPCDPDFVIVGYGKVGGLEFGHGSDLDLVFIHDGDPQCETDGGKSIDGAQFFTRLGQKIIHFLTAQTPSGTLYEVDMRLRPSGAAGLLVSSLGAFQRYQEQEAWTWEHQALVRARVLAGCRRVQASFEAVRAEVLARPRDLDALRTEVSEMRAKMRDNLGTRATAAGTASNAFEATAAFDLKHDAGGIVDIEFMVQYAVLAWSGEHPALLEFTDNIRILEGLERAGLIASEDVRLLQEAYKAYRAAAHRLALQKEAGVVSGEHFQTERREVIRIWRELRLG
Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme (ATP:glutamine synthetase adenylyltransferase) (ATase) [Includes: Glutamine synthetase adenylyl-L-tyrosine phosphorylase (EC 2.7.7.89) (Adenylyl removase) (AR) (AT-N); Glutamine synthetase adenylyl transferase (EC 2.7.7.42) (Adenylyl transferase) (AT) (AT-C)]
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
208,964
982
110,104
ATP-binding;Magnesium;Multifunctional enzyme;Nucleotide-binding;Nucleotidyltransferase;Reference proteome;Transferase
GO:0000287; GO:0000820; GO:0005524; GO:0005829; GO:0008882; GO:0047388
Inferred from homology
3
null
null
null
PF08335;PF03710;
IPR023057;IPR005190;IPR043519;IPR013546;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Pseudomonadales (order), Pseudomonadaceae (family), Pseudomonas (genus), Pseudomonas aeruginosa group (no rank), Pseudomonas aeruginosa (species)
glnE PA5014
false
Pseudomonas aeruginosa
1
row_289710
false
null
306,213
Q9I137
MTDNLNLGAIDLGTDDEFIARHIGPRAADTQAMLQRLGYDSLDTLIGNVIPDSIKGSSVLDLPAGMGEAEALASLKAIAARNRALRSFIGQGYYNCHTPAPILRNLLENPAWYTAYTPYQPEISQGRLEALLNFQTLVSDLSGLPIANASMLDEATAAAEAMTFCKRLSKNRTSQAFFASRHCHPQTLDVLRTRAEPLGIEVVVGDESTIEDFSAYFGALLQYPTCDGEIVDYRELVSRFHAVDALVAVAADLLALTLLTPPGEFGADVAIGSAQRFGVPLGFGGPHAAYFATRDAFKRDMPGRLVGVSIDRHGKPAYRLAMQTREQHIRREKATSNICTAQVLLANIASMFAVYHGPQGLLRIARRTHRLTAILAAGLERLGVAVEQKHFFDTLSLATGARTAAIHAKARAAGINLREIDAGRLGLSLDETVRQTDVETLWGLLAEEGQALPDFAALAASSGDRLPVELLRQSAILSHPIFNRHHSETELMRYLRKLADKDLALDRTMIPLGSCTMKLNAASEMIPVTWAEFGNLHPFAPAEQSEGYRQLTDELEAMLCSATGYDAVSLQPNAGSQGEYAGLLAIRAYHQSRGDSQRDICLIPSSAHGTNPATASMVGMRVVVVACDARGNVDVEDLRNKASEHKERLAALMITYPSTHGVFEEAIREICAIVHDCGGQVYIDGANMNAMVGLCAPGKFGGDVSHLNLHKTFCIPHGGGGPGVGPIGVRAHLAPFLPGHARGERKEGAVSAAPYGSASILPITWMYIRMMGGEGLKRASEMAILNANYIAHRLEEHYPVLYAGGNGLVAHECILDLRPLKDSSGISVDDVAKRLMDFGFHAPTMSFPVAGTLMIEPTESESKAELDRFCDAMIRIREEIRAVERGELDKEDNPLKNAPHTAAELLGEWNHAYSREQAAYPLASLVEAKYWPPVGRVDNVYGDRNLTCSCPPIEAYSEE
Glycine dehydrogenase (decarboxylating) 1 (EC 1.4.4.2) (Glycine cleavage system P-protein 1) (Glycine decarboxylase 1) (Glycine dehydrogenase (aminomethyl-transferring) 1)
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
208,964
959
103,919
Oxidoreductase;Pyridoxal phosphate;Reference proteome
GO:0004375; GO:0005829; GO:0005960; GO:0016594; GO:0019464; GO:0030170
Inferred from homology
3
null
null
null
PF21478;PF02347;
IPR003437;IPR049316;IPR049315;IPR020581;IPR015424;IPR015421;IPR015422;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Pseudomonadales (order), Pseudomonadaceae (family), Pseudomonas (genus), Pseudomonas aeruginosa group (no rank), Pseudomonas aeruginosa (species)
gcvP1 PA2445
false
Pseudomonas aeruginosa
2
row_289920
false
null
305,973
Q9HTX7
MSQTPSLAQLQPADAFLRRHLGPDPAEQQAMLAFLGVSTRAELIVQTVPPAIRLNRPLELPAALDEQAALARLRGYAGLNQRWTSLIGMGYYGTVTPSVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQLTIDLTGLDLASASLLDEATAAAEAMALARRVAKARSNRFFVDAHCHPQTVSVLRTRAEAFGFELVVDEPDNLAAHAVFGALLQYPDSRGEIRDLRPLIEALHGQQALACVASDLLALLLLTPPGELGADVVLGSAQRFGVPMGYGGPHAAFFATREGYKRAMPGRIIGVSRDARGNPALRMALQTREQHIRREKANSNICTAQVLLANIASLYAVYHGPQELKRIAQRVQRLTALLAAGLKSKGLRRLNRHFFDTLTYEVGERQAAILERARAARVNLRVVDDRRLALSLDETCDAATLATLFEIFLGAGHGLDVAHLDGGAVADGIPAVLQRTSAYLQHPVFNAHHSETEMLRYLRQLEGKDLALNQAMIPLGSCTMKLNASSEMIPITWPEFAELHPFVPREQAEGYRRMIDELEAWLRAITGFDAICMQPNSGAQGEYAGLLAIRRYHQSRGDSQRDICLIPASAHGTNPASAIMASMRVVIVECDPRGNVDLDDLRLKAAEAGDRLSCLMITYPSTHGVYEEGIGEICEVVHRHGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVKRHLAPFVANHPVIRVEGPNPLNDAVSATPWGSASILPISWMYIAMMGPQLADASEVAILSANYLANRLDGAFPVLYRGRNERVAHECILDLRPLKAQTGITEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIGKVESGAWPAEDNPLKRAPHTLADVTGIWQRPYEIAEAVTPSEHARAFKYWPAVNRVDNVYGDRNLFCACVPLDDYRE
Glycine dehydrogenase (decarboxylating) 2 (EC 1.4.4.2) (Glycine cleavage system P-protein 2) (Glycine decarboxylase 2) (Glycine dehydrogenase (aminomethyl-transferring) 2)
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
208,964
958
104,711
Oxidoreductase;Pyridoxal phosphate;Reference proteome
GO:0004375; GO:0005829; GO:0005960; GO:0016594; GO:0019464; GO:0030170
Inferred from homology
3
null
null
null
PF21478;PF02347;
IPR003437;IPR049316;IPR049315;IPR020581;IPR015424;IPR015421;IPR015422;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Pseudomonadales (order), Pseudomonadaceae (family), Pseudomonas (genus), Pseudomonas aeruginosa group (no rank), Pseudomonas aeruginosa (species)
gcvP2 PA5213
false
Pseudomonas aeruginosa
3
row_289685
false
null
166,704
B7V6T4
MDMAQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFAPGDEVTHFEGWKMTVREVEESEGLLVYHGLTAQNEQCTLPETQLSNFIQFRLASDRLFAGQIDPLPWFSLRYHTLERRSQLLQSSLWGLGGARAQPIAHQLHIAREVADRMAPRVLLADEVGLGKTIEAGLIIHRQLLSGRAGRVLILVPENLQHQWLVEMRRRFNLQVALFDKERFAESDASNPFEDTQLALVALEWLKEDERAQDALFAAGWDLLVVDEAHHLVWHQDQVSAEYALVEQLAEIIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLEAFRRESEQYRPVAEAVQELLDHGSLSAGARKAIHGFLGSEGDELLASVEGGDEEARSRLVRELLDRHGTGRVLFRNTRAAVQGFPQRELHAYPLPMPSQYEELPAGEHPDLYPEVNFQQQWEDGDDNNRWWRFDPRVEWLIDTLKMLKQFKVLVICAHAETALDLEDALRLRSGISATVFHEGMSILERDRAAAYFADEEFGAQVLICSEIGSEGRNFQFAHHLVLFDLPAHPDLLEQRIGRLDRIGQRHTIQLHVPHLENSAQQRLFQWYHQALNAFLNTCPTGNALQHEFGPRLLPLLDGGEDKAWDALLAEGRARREALEAELHSGRDRLLELNSGGAGEGEALVEAIEEQDDDFALPIYMERLFDAYGIHSEDHSENALILKPSEKMLDAGFPLGDDEGVTITYDRAQALAREDMQFLTWEHPMVQGGMDLVLSGSMGNTSVALIKNKALKPGTVLLELLFVSEAVAPRALQLGRWLPPQALRCLLDANGNDLAGRVSLETLNDQLESVPRVSANKFVQAQRDVLAKQFDVAEGKIVPRHEERVARAKQQFAAAMDEELARLTALKAVNPSVRDSELDSLRTQREEGLALLDKASLRLEAIRILVAG
RNA polymerase-associated protein RapA (EC 3.6.4.-) (ATP-dependent helicase HepA)
Pseudomonas aeruginosa (strain LESB58)
557,722
950
106,819
Activator;ATP-binding;DNA-binding;Helicase;Hydrolase;Nucleotide-binding;Transcription;Transcription regulation
GO:0003677; GO:0004386; GO:0005524; GO:0006355; GO:0016817
Inferred from homology
3
null
null
null
PF00271;PF12137;PF00176;PF18339;PF18337;
IPR014001;IPR001650;IPR023949;IPR027417;IPR022737;IPR038718;IPR049730;IPR000330;IPR040765;IPR040766;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Pseudomonadales (order), Pseudomonadaceae (family), Pseudomonas (genus), Pseudomonas aeruginosa group (no rank), Pseudomonas aeruginosa (species)
rapA PLES_17581
false
Pseudomonas aeruginosa
4
row_154127
false
null
306,093
Q9HXH0
MDKTYQPHAIETSWYETWESNDYFAPSGEGQPYTIMIPPPNVTGSLHMGHGFNNAIMDALIRYRRMQGRNTLWQPGTDHAGIATQMVVERQLGAQGVSRHDLGREKFLEKVWEWKEQSGGNITRQIRRLGSSVDWSRERFTMDDGLSEAVKEAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWHLRYPLVNGAKTSEGLDYLVVATTRPETLLGDAAVAVHPEDERYAKLIGQFAELPIVGRHIPIIADEYVDREFGTGCVKITPAHDFNDYEVGKRHDLPLINIFDKNAAVLAQAQVFHLDGSVNPNLDPSLPQSYAGMDRFAARKAIVAEFEAMGLLEKVDDHALKVPKGDRSGTVIEPWLTDQWYVSTKPLAEDAIAAVEDGRIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRDEVEVRTKHKLGNEAELRQDEDVLDTWFSSGLWTFSTLGWPQQTEFLKTFHPTDVLVTGFDIIFFWVARMIMLTMHLVKNPDGTPQIPFKTVYVHGLVRDGQGQKMSKSKGNVLDPLDIVDGIDLDTLLQKRTSGMMQPKLAEKIAKQTRAEFPEGIASYGTDALRFTFCSLASTGRDIKFDMGRVEGFRNFCNKIWNAANFVIENTDGQDTGVNGEPVELSSVDRWIISQLQRTEQEVTRQLDAFRFDLAAQALYEFIWDEYCAWYLELVKPVLWDENAPIERQRGTRRTLIRVLETALRLAHPFMPFITEEIWQRIKGQAGKEGPTLMLQPWPVADEGRIDAAAEGDIEWVKALMLGVRQIRGEMNISMAKRIDIILKNASPSDHRRLADNEPLLMKLAKLESIRVLEAGEEAPMSATALVGDMEVLVPMAGLIDKSAELGRLDKEIQRLEGEVKRVGGKLSNEGFVAKAPADVIEKERAKLAEAEQALAKLAEQRQKIAAL
Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
208,964
950
107,708
3D-structure;Aminoacyl-tRNA synthetase;ATP-binding;Coiled coil;Cytoplasm;Ligase;Nucleotide-binding;Protein biosynthesis;Reference proteome
GO:0002161; GO:0004832; GO:0005524; GO:0005829; GO:0006438
Evidence at protein level
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_02004}.
null
null
PF08264;PF00133;PF10458;
IPR001412;IPR002300;IPR033705;IPR013155;IPR014729;IPR010978;IPR009080;IPR037118;IPR019499;IPR009008;IPR002303;
4XKZ;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Pseudomonadales (order), Pseudomonadaceae (family), Pseudomonas (genus), Pseudomonas aeruginosa group (no rank), Pseudomonas aeruginosa (species)
valS PA3834
false
Pseudomonas aeruginosa
5
row_289803
false
null
306,072
Q9HWG0
MDKILIRGARTHNLKNVDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRCPDHDIPLEAQTVSQMVDQVLALPEGSKLMLLAPVIRERKGEHLAVFDEMRAQGFVRARVDGKLYELDEVPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALSLADGIALVAPMDEDEDVEEIIFSARFACPVCGHSISELEPKLFSFNNPAGACPTCDGLGVKQFFDARRVVNGELTLAEGAIRGWDRRNVYYFQMLGSLAQHYGFSLEEPFDELGAEHQKVVLYGSGRENVDFRYLNDRGDIVKRSHPFEGILPNLERRYRETESATVREELAKFLSTQPCPDCHGTRLRREARHVWVGDRTLPAITAMPVGEACEYAAGLSLTGRRGEIAAKILKEIRDRLQFLVNVGLDYLTLDRSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLGTLTHLRNLGNTVIVVEHDEDAIRLADYVVDIGPGAGVHGGQVVAEGTPDQVMNHPDSLTGKYLSGRKKIAVPAKRTPRDKKKLLKLKGARGNNLQNVNLEIPVGLFTCITGVSGSGKSTLINNTLFPITATALNGATTLEVAPYDSFDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFSGVPEARSRGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCKGKRYNRETLEIRYKGKSIHEVLEMTIEEAREFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLSRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWLVDLGPEGGSKGGQIIANGTPEQVAEMPQSHTGHFLKPLLERDRA
UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
208,964
945
104,489
ATP-binding;Cytoplasm;DNA damage;DNA excision;DNA repair;DNA-binding;Excision nuclease;Metal-binding;Nucleotide-binding;Reference proteome;Repeat;SOS response;Zinc;Zinc-finger
GO:0003677; GO:0005524; GO:0005737; GO:0006289; GO:0008270; GO:0009380; GO:0009381; GO:0009432; GO:0016887
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00205}.
null
null
PF17755;PF17760;
IPR003439;IPR017871;IPR013815;IPR027417;IPR004602;IPR041552;IPR041102;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Pseudomonadales (order), Pseudomonadaceae (family), Pseudomonas (genus), Pseudomonas aeruginosa group (no rank), Pseudomonas aeruginosa (species)
uvrA PA4234
false
Pseudomonas aeruginosa
6
row_289782
false
null
166,620
B7V0A3
MTDYKATLNLPETAFPMKAGLPQREPETLKFWNDIGLYQKLRAIGGDRPKFVLHDGPPYANGSIHIGHAVNKILKDIIVRSKTLAGYDAPYVPGWDCHGLPIEHKVETTHGKNLPADKTRELCREYAAEQIEGQKADFIRLGVLGEWDNPYKTMNFANEANEIRALAEMVKQDFVFKGLKPVNWCFDCGSALAEAEVEYADKKSPTIDVGFPVADADKLAAAFGLAALDKPAQIVIWTTTPWTIPANQALNVHPEIDYALVDAGDRYLVLAEALVESCLARYQREGKVVATAKGEALELINFRHPFYERLSPVYLADYVALDAGTGIVHSSPAYGEDDFYTCKRYGMSNDDILSPVQSNGVYVDSLPFFGGQFIWKANPNVVAKLEEVGSLLAHETINHSYMHCWRHKTPLIYRATAQWFVGMDKQPRQGASLRERALEAITQTEFVPGWGQARLHGMIAGRPDWCISRQRNWGVPIPFFLHKASGELHPRTVELMEEVAQRVEKEGIEAWFKLDAAELLGEDAAQYEKINDTLDVWFDSGTTHWHVLRGSHRIGHASGPVADLYLEGSDQHRGWFHSSLLTGCAIDNHAPYRQLLTHGFTVDESGRKMSKSLGNTVVPQTVIDTLGADILRLWVASTDYSGEIAVSQQILQRSADAYRRIRNTTRFLLSNLNGFDPATDLLPPQEMLALDRWAVDRALLLQREIEEAYREYRFWNVYSKVHNFCVQELGGFYLDIIKDRQYTTGANSVARRSCQTALFHIAEALVRWIAPILAFTAEEVWKFLPGERAESVMLATWYDGLSELPADVTLNRQYWEQVMAVKAAVNKELENQRAAKAVGGNLQAEVTLYAEDALQVQLAKLGNELRFVLITSTATLAPLSAAPADAVDSEVAGLKLKVVKSTHAKCGRCWHHREDVGQHAAHPDLCGRCIENIEGSGEVRHYA
Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
Pseudomonas aeruginosa (strain LESB58)
557,722
943
105,452
Aminoacyl-tRNA synthetase;ATP-binding;Cytoplasm;Ligase;Metal-binding;Nucleotide-binding;Protein biosynthesis;Zinc
GO:0000049; GO:0002161; GO:0004822; GO:0005524; GO:0005829; GO:0006428; GO:0008270
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_02002}.
null
null
PF08264;PF00133;PF06827;
IPR001412;IPR002300;IPR033708;IPR002301;IPR023585;IPR050081;IPR013155;IPR014729;IPR009080;IPR009008;IPR010663;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Pseudomonadales (order), Pseudomonadaceae (family), Pseudomonas (genus), Pseudomonas aeruginosa group (no rank), Pseudomonas aeruginosa (species)
ileS PLES_49431
false
Pseudomonas aeruginosa
7
row_154043
false
null
385,703
B7V4I1
MAVKSLVFRRKFPLLVTGSLLALQPVAALTVQAADQFDCKVSATGGWDCSPLQNANANLPPRPAHTATSVSTAAAGSSVSGSGGETVEAEPTQRLVTESGGRALKSRSADYSHLDWIPREKLTAAQLAEIGPYCGGSYIEPVRPGMDDGAPSDESPTYVSAKASRYEQEKQIATLAGDVVLRQGSMQVEGDEANLHQLENRGELVGNVKLRDKGMLVVGDHAQVQLDNGEAQVDNAEYVIHKAHARGSALYAKRSENAIIMLKDGTYTRCEPSSNAWTLKGNNVKLNPATGFGTATNATLRVKDFPVFYTPYIYFPIDDRRQSGFLPPSFSSTSDTGFTLVTPYYFNLAPNYDATLYPRYMAKRGMMLEGEFRYLTHSSEGTVNAAYLNDKDDHRENFPDYSKDRWLYGLKNTTGLDSRWLAEVDYTRISDPYYFQDLDTDLGVGSTTYVNQRGTLTYRGDTFTGRLNAQAYQLATTTDVTPYERLPQITFDGFLPYEPGGVKFNYSTEFVRFDRDLDDNIYLNDDGSEWGRRPDAYLQGLARSTGDRVHLEPGMSLPMTRSWGYLTPTLKYLYTKYDLDLDSQGKRTLTTYDETFDSSQDRSLPLVKVDSGLYFDRDTTLAGTQFRQTLEPRAMYLYVPYKDQENIPVFDTSEPSFSYDSLWRENRFSGRDRIGDANQLSLGVTTRFIESNGFERASLSAGQIYYFRDRRVQLPGLSEKDLALMRSKNPNLDLKDPDTDSWRSPYALMGQYRFNRDWRVSSDFNWNPNTSRTESGSAMFHYQPEDNPNKVVNAGYRYREDSRRFNSSTGRFEYGRENDIIKQHDFSVIWPLVPQWSVLARWQYDYNKNRTLEAFGGFEYDSCCWKLRLINRYWLDVDDDAFLNQNEKADRGIFLQIVLKGLGGIVGNKTEMFLDKGIQGYRQREDQAM
LPS-assembly protein LptD
Pseudomonas aeruginosa (strain LESB58)
557,722
929
105,226
Cell outer membrane;Membrane;Signal
GO:0009279; GO:0015920; GO:0043165; GO:1990351
Inferred from homology
2
SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-Rule:MF_01411}.
SIGNAL 1..33; /evidence="ECO:0000255|HAMAP-Rule:MF_01411"
null
PF04453;PF03968;
IPR020889;IPR050218;IPR007543;IPR005653;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Pseudomonadales (order), Pseudomonadaceae (family), Pseudomonas (genus), Pseudomonas aeruginosa group (no rank), Pseudomonas aeruginosa (species)
lptD imp ostA PLES_05921
false
Pseudomonas aeruginosa
8
row_368388
false
null
105,880
A0A0H2ZC68
MVRLRTLVRAIAAASVLTSGMAHGLGLGEITLKSALNQPLDAEIELLEVRDLGSGEVIPSLASPEEFSKAGVDRLYYLTDLKFTPVVKPNGKSVIRVTSSKPVQEPYLNFLVQVLWPNGRLLREYTVLLDPPLYSPQAAASAPQAPVSAPRATGAPRTPQAPAPVRTTAPAGSDTYRTVSNDTLWEIAQRNRTDRVSVPQAMLAFQELNPGAFVDGNINRLKSGQVLRIPTEQQMLERSPREALSQVQAQNQSWRGSRNPAAGTAGARQLDATQRNAAGSAPSKVDATDNLRLVSGEGKASKGADKGGKGDSKAIADTLAVTKESLDSTRRENEELQSRMQDLQSQLDKLQKLIQLKDAQLAKLQGQLGAEGQGAAQPNAALPDASQPNAAAQAPAQPGTPAAAAPTPAPAGEAPAAPAQPPVAPPPAPVAEKPPAPAVPAPAPVQAAEQPAPSFLDELLANPLWLAVIGGSALLALLVLLMILSRRNAQKEKEEAQAFAADAGEEQEDALDLGKDGFDDLTLDEPEPQVAAAAPQVEKTTAQTSDALGEADIYIAYGRFNQAAELLQNAIYDEPQRTDLRLKLMEVYAEMGDREGFARQENELREIGGAQPQVEQLKSRYPAMVAVAAVAGLAGAKLAQDELDSFSLDDLSLDDSGHAAKPDAAGQDLDDAFDLSLDDLGGGDLGSDDVQADLKSDSGALDDLTLDSDLDLAASTAADKPVDDLDFGLDFAELAETPSQPKHDDLGDFSLDLDAPEDKLSDDDFLLSLNDEVPAAAPANNEFTLDTEAAEEPALSLPDDFDLSLADEPTEPAAPEKGEDSFAAQLDEVSAQLDELASNLDEPKSAAPSFSAEDAAVASALDGDADDDFDFLSGADEAATKLDLARAYIDMGDSEGARDILDEVLAEGNDSQQAEARELLERLA
Motility hub protein FimV
Pseudomonas aeruginosa (strain UCBPP-PA14)
208,963
924
97,316
Cell inner membrane;Cell membrane;Membrane;Signal;Transmembrane;Transmembrane helix
GO:0005886; GO:0006406; GO:0017056
Evidence at protein level
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000269|PubMed:32080219}; Single-pass membrane protein {ECO:0000255}.
SIGNAL 1..24; /evidence="ECO:0000255"
TRANSMEM 464..484; /note="Helical"; /evidence="ECO:0000255"
null
IPR038440;IPR018392;IPR036779;IPR020011;IPR020012;IPR011990;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Pseudomonadales (order), Pseudomonadaceae (family), Pseudomonas (genus), Pseudomonas aeruginosa group (no rank), Pseudomonas aeruginosa (species)
fimV PA14_23830
false
Pseudomonas aeruginosa
9
row_94584
false
null
52,344
Q9I5W4
MSLSTTAFPSLQGENMSRSPIPRHRALLAGFCLAGALSAQAATQEEILDAALVSGDSSQLTDSHLVALRLQQQVERIRQTRTQLLDGLYQNLSQAYDPGAASMWVLPANPDNTLPFLIGDKGRVLASLSLEAGGRGLAYGTNVLTQLSGTNAAHAPLLKRAVQWLVNGDPGAATAKDFKVSVVGVDKTAALNGLKSAGLQPADAACNALTDASCASTSKLLVLGNGASAASLSATVRARLQAGLPILFVHTNGWNQSSTGQQILAGLGLQEGPYGGNYWDKDRVPSSRTRTRSVELGGAYGQDPALVQQIVDGSWRTDYDWSKCTSYVGRTTCDDVPGLSDFSKRVDVLKGALDAYNQKAQNLFALPGTTSLRLWLLWADAVRQNIRYPMDKAADTARFQETFVADAIVGYVREAGAAQKELGSYAGQRQQSMPVSGSEETLTLTLPSAQGFTAIGRMAAPGKRLSIRIEDAGQASLAVGLNTQRIGSTRLWNTRQYDRPRFLKSPDIKLQANQSVALVSPYGGLLQLVYSGATPGQTVTVKVTGAASQPFLDIQPGEDSSQAIADFIQALDADKADWLEIRSGSVEVHAKVEKVRGSIDKDYGGDVQRFIRELNEVFIDDAYTLAGFAIPNQAKTPAIQQECAARGWDCDSETLHKLPGTQHINVDQYAQCGGGCSGNPYDQTWGLNPRGWGESHELGHNLQVNRLKVYGGRSGEISNQIFPLHKDWRVLREFGQNLDDTRVNYRNAYNLIVAGRAEADPLAGVYKRLWEDPGTYALNGERMAFYTQWVHYWADLKNDPLQGWDIWTLLYLHQRQVDKSDWDANKAALGYGTYAQRPGNSGDASSTDGNDNLLLGLSWLTQRDQRPTFALWGIRTSAAAQAQVAAYGFAEQPAFFYANNRTNEYSTVKLLDMSQGSPAWPFP
Immunomodulating metalloprotease (EC 3.4.24.-) (IMPa)
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
208,964
923
100,155
3D-structure;Hydrolase;Metal-binding;Metalloprotease;Protease;Reference proteome;Secreted;Signal;Zinc
GO:0005615; GO:0006508; GO:0008237; GO:0015628; GO:0030163; GO:0043952; GO:0046872; GO:1903237
Evidence at protein level
5
SUBCELLULAR LOCATION: Secreted {ECO:0000269|PubMed:22309196}.
SIGNAL 1..41; /evidence="ECO:0000255"
null
PF18642;PF18650;PF13402;
IPR041549;IPR040711;IPR042279;IPR031161;
5KDV;5KDW;5KDX;7JTV;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Pseudomonadales (order), Pseudomonadaceae (family), Pseudomonas (genus), Pseudomonas aeruginosa group (no rank), Pseudomonas aeruginosa (species)
impA PA0572
false
Pseudomonas aeruginosa
10
row_45366
false
null
202,947
P48372
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWNKPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAMRYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMATNIPPHNLGEVIDGCLALMDNPDLTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRIYIRARAVVEEMEKGGGREQIIITELPYQLNKARLIEKIAELVKEKKIEGISELRDESDKDGMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTLNLKDMLEVFVRHRREVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKSSPTPAEAKERLIATAWESSAVEAMVERAGADACRPEDLDPQYGLRDGKYYLSPEQAQAILELRLHRLTGLEHEKLLSEYQEILNLIGELIRILTNPARLMEVIREELEAVKAEFGDARRTEIVASQVDLTIADLITEEDRVVTISHGGYAKSQPLAAYQAQRRGGKGKSATGMKDEDYIEHLLVANSHATLLLFSSKGKVYWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEALQQNGGADDDLDEAEGAVLEGEVVEAAEVEEVEGETAELVAEPTGAYIFMATAFGTVKKTPLVQFSRPRSSGLIALKLEEGDTLIAAAITDGAKEVMLFSSAGKVIRFAESVVRIMGRNARGVRGMRLGKGQQLISMLIPESGAQILTASERGFGKRTPLSKFPRRGRGGQGVIAMVTNERNGALIAAVQVQEGEEIMLISDQGTLVRTRVDEVSLSGRNTQGVTLIKLASDEVLVGLERVQEPSGGDDEDLPEGEEAAESLGESAESESEPAAEAEGNEE
DNA gyrase subunit A (EC 5.6.2.2)
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
208,964
923
101,135
ATP-binding;Cytoplasm;DNA-binding;Isomerase;Nucleotide-binding;Reference proteome;Topoisomerase
GO:0003677; GO:0005524; GO:0005694; GO:0005737; GO:0006261; GO:0006265; GO:0009330; GO:0034335
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01897}.
null
null
PF03989;PF00521;
IPR005743;IPR006691;IPR035516;IPR013760;IPR013758;IPR013757;IPR002205;IPR050220;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Pseudomonadales (order), Pseudomonadaceae (family), Pseudomonas (genus), Pseudomonas aeruginosa group (no rank), Pseudomonas aeruginosa (species)
gyrA PA3168
false
Pseudomonas aeruginosa
11
row_189442
false
null
101,565
Q9HWA7
MFEFSRSSSAEAERPEPFSQEGPALWSASLRSWDLCFEMDEQDRVIRVGGRQAYRLQCAHGLGEQPRPFAEYLERRAPGAPTLAGLRRGERLDLTLRSDAAAPLTCRFQPMQPLDGLGRSLLLGMDISDLNWQSDSQQHQLQSLSLGKLILSRLRHVSHGHLAEAVQEILESLSGAFQMQAIALLLGDGKGFCTVFASHVRPGSDSLLRPPLQLADDDLREGAGARLLRRGEGASTLLRQIGEDALYLVPATMRGGRLGALLVRPMSLEQLAQGPAPQDWQYLAELLANQVADRCELHEQHDSSRKLGLLQEMIGGGWWRYWAEQELFELAPALHDSLGLTGEYRRVPLEHLQGLLQPADADELGLRLRASLRSGQALAQDLCLRQPDSRGERRWLRIEGRPLGRGSALGLSGVLLDISEGRRQEERAQAAHARLRSLIDSAPVVIYVQRVEQGHLVPEFYSESASNLLGLDLQGQSWQALAERVHPDDLEAFFARGRELLREGRVKTRYRLADGQGNWHWLYDEAKLLRDAQGLPSEAVGLWLDVTEQHLAAQRIAESEERYRVLVEDSPALICRYTADLVLTYVNRTFADSLATSPERLVGRRLDEWLAAEDASALRARLLGSPREGASEVPELRFNLPGQRFLWLVWAERPLFDARGELCEVQAVGRDNTPVRRAQQQLAQGAKMASLGEMVSGLAHEVKQPLHVLRMTLFNMRQRMNSVGLDGDYLGEKLERMDAQVLRVDRLVSHLGVFSRKSALEALPFDPYAAFEGALGLLGEGLRQHAIEVECPAPTQRMVVRGQADQLEQVIINLLANARDALLGNPGLASRRVRLEQVACREPGWVELHVHDNGGGIEPLLLERIFEPFFTTKAEGKGTGLGLSVSHDLVRNMGGSLTAANQGEGALFVVRLPLAAPAEAGG
Two-component sensor PprA (EC 2.7.13.3)
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
208,964
922
102,118
ATP-binding;Kinase;Nucleotide-binding;Phosphoprotein;Reference proteome;Transferase;Two-component regulatory system
GO:0000155; GO:0005524
Evidence at protein level
4
null
null
null
PF02518;PF00512;PF08447;PF08448;
IPR036890;IPR005467;IPR003661;IPR036097;IPR001610;IPR000014;IPR000700;IPR035965;IPR013656;IPR013655;IPR004358;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Pseudomonadales (order), Pseudomonadaceae (family), Pseudomonas (genus), Pseudomonas aeruginosa group (no rank), Pseudomonas aeruginosa (species)
pprA PA4293
false
Pseudomonas aeruginosa
12
row_90556
false
null
166,609
B7UZI1
MFAPLLKKLFGSKNERDVKRMAKAVQAINALEPQMVALSDEQLKAKTAEFQQRYAKGETLDQLLPEAFAVVREAGKRVMGMRHFDVQLIGGMTLHDGKIAEMRTGEGKTLVGTLPVYLNALSGKGVHVVTVNDYLARRDANWMRPLYEFLGLSVGVVTPFQPPEDKRAAYAADITYGTNNEFGFDYLRDNMAFSLDDKFQRELNFAVVDEVDSILIDEARTPLIISGQAEDSSELYIKINKLIPRLKRQVEEVEGKPTEEGHYSIDEKTRQVELNEQGHQFIEDLLSQNGLLGEGESLYSAHNLSLLTHVYAALRAHTLFHRNVEYIVQGDQILLIDEHTGRTMPGRRLSEGLHQAIEAKEGLPIQAESQTLASTTFQNYFRLYNKLAGMTGTADTEAFEFRQIYGLDVVVIPTHRPIARKDFNDLVYLTQEEKYAAIITDIKQCQALGRPILVGTASIESSEYVSKLLQEAGIEHKVLNAKYHEKEAEIIAQAGAPGSVTIATNMAGRGTDILLGGNWEVEVAALENPTEEQIAQIKAEWQKRHQQVIEAGGLHVIASERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDNLMRIFASDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRNFDIRKQLLEFDDVANEQRKVIYHMRNTLLSAEDVGETIKEFREETLSATINQHIPPQSLPEQWDIEGLEAALYSDFAVRLPIQQWLDEDDKLYEETLRSKILEQIVAAYYEKEELAGAEALRAFEKQMLLRVLDDLWKDHLSTMDHLRHGIHLRGYAQKNPKQEYKRESFTLFQELLDSIKRDTIRVLSHVQVRREDPAEEEARLRREAEELAKRMQFQHAEAPSMEQAVAGEEEELPEGPAPVVPLEPVRNEQKIGRNEPCPCGSGKKYKHCHGQLD
Protein translocase subunit SecA (EC 7.4.2.8)
Pseudomonas aeruginosa (strain LESB58)
557,722
916
103,855
ATP-binding;Cell inner membrane;Cell membrane;Cytoplasm;Membrane;Metal-binding;Nucleotide-binding;Protein transport;Translocase;Translocation;Transport;Zinc
GO:0005524; GO:0005829; GO:0005886; GO:0006605; GO:0008564; GO:0017038; GO:0031522; GO:0043952; GO:0046872; GO:0065002
Inferred from homology
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_01382}; Peripheral membrane protein {ECO:0000255|HAMAP-Rule:MF_01382}; Cytoplasmic side {ECO:0000255|HAMAP-Rule:MF_01382}. Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01382}. Note=Distribution is 50-50. {ECO:0000255|HAMAP-Rule:MF_01382}.
null
null
PF21090;PF02810;PF07517;PF01043;PF07516;
IPR014001;IPR001650;IPR027417;IPR004027;IPR000185;IPR020937;IPR011115;IPR014018;IPR011130;IPR044722;IPR011116;IPR036266;IPR036670;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Pseudomonadales (order), Pseudomonadaceae (family), Pseudomonas (genus), Pseudomonas aeruginosa group (no rank), Pseudomonas aeruginosa (species)
secA PLES_47821
false
Pseudomonas aeruginosa
13
row_154032
false
null
305,959
Q9HT80
MSQAPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRKQYPDSPFAVVFDAKGPTFRDELFAEYKANRPSMPDDLRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLARSSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSRLDVDGVKEKFGVGPELIIDFLALMGDKVDNIPGVPGVGEKTALGLLTGVGGGLEVLYASLDKVPELPIRGAKGLPAKLEENREQAFLSYQLATIKTDVELDVEIDKLYPGEPQREALIALYRELEFKNWLDDLLREAKEAGENGEAETPIQAEVDYDVVLDQAGFDAWLKKLEEAELIAFDTETTSIDAQQAQVVGVSFAVKEGEAAYVPLAHSYMGVPEQLDRDAVLRALKPLLEDPKKLKVGQHAKYDINVLANASTPIALRGVAYDTMLESYVLDSTATRHDMDSLALKYLGHSTIRFEDIAGKGAKQLTFDQIAIEQAGPYAAEDADVTLRLHQALWQKLEAIPSLARVLTDIEMPLVPVLARIERNGALVDANLLGIQSRELGEKMVALERQAYDLAGQEFNLGSPKQLGAILYDKLGLPVLSKTATGQPSTAEAVLAELAEQDFELPKVIMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFVAPQGYKLLAADYSQIELRIMAHLAKDDGLLDAFRHDLDVHRATAAEVFGVPLEDVSGDQRRSAKAINFGLIYGMSAFGLAKQIGVERKEAQAYIDRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPEIHSKNGAMRKAAERTAINAPMQGTAADIMKRAMVAVDNWLQESGLDARVILQVHDELVLEVREDLVEQVCEGIRPLMSGAATLDVPLVVEAGVGSNWDEAH
DNA polymerase I (POL I) (EC 2.7.7.7)
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
208,964
913
99,793
DNA damage;DNA repair;DNA replication;DNA-binding;DNA-directed DNA polymerase;Exonuclease;Hydrolase;Nuclease;Nucleotidyltransferase;Reference proteome;Transferase
GO:0003677; GO:0003887; GO:0006261; GO:0006302; GO:0008408; GO:0008409
Inferred from homology
3
null
null
null
PF01367;PF02739;PF00476;PF01612;
IPR002562;IPR020046;IPR002421;IPR036279;IPR019760;IPR001098;IPR043502;IPR020045;IPR018320;IPR002298;IPR008918;IPR029060;IPR012337;IPR036397;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Pseudomonadales (order), Pseudomonadaceae (family), Pseudomonas (genus), Pseudomonas aeruginosa group (no rank), Pseudomonas aeruginosa (species)
polA PA5493
false
Pseudomonas aeruginosa
14
row_289671
false
null
101,621
Q9I3F5
MPALDSLKTLRSLAVDGKTYHYYSLPEAARTLGDLGKLPMSLKVLLENLLRWEDGSTVTGDDLKALAGWLRERRSDREIQYRPARVLMQDFTGVPAVVDLAAMRAAMAKAGGDPQKINPLSPVDLVIDHSVMVDKFASESAFEQNVEIEMQRNGERYAFLRWGQNAFDNFSVVPPGTGICHQVNLEYLGRTVWTKDEDGRTYAFPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTQMLRKKGVVGKFVEFYGDGLADLPLADRATIANMAPEYGATCGFFPVDEITLGYLRLSGRPESTVKLVEAYSKEQGLWREKGHEPVFTDTLHLDMGEVEASLAGPKRPQDRVALQNVASAFNEFLGLQLHPSSTEEGRLLSEGGGGTAVGANAAFGEIDYQHDGQTHRLKNGAVVIAAITSCTNTSNPSVMMAAGLLAKKAVEKGLQRKPWVKSSLAPGSKVVTDYFKAAGLTRYLDELGFDLVGYGCTTCIGNSGPLLEPIEKAIQQADLTVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGSVRINLSEEPLGTGKDGQPVYLKDIWPSQKEIAEAIQKVDTEMFHKEYAEVFAGDEKWQAIQVPQSDTYEWQADSTYIQHPPFFEHIAEAPPAIADVEQARVLAVLGDSVTTDHISPAGNIKADSPAGRYLREHGVEPKDFNSYGSRRGNHEVMMRGTFANIRIKNEMLGGEEGGNTLYVPSGEKLAIYDAAMRYQEDGTPLVIVAGKEYGTGSSRDWAAKGTNLLGVKAVIAESFERIHRSNLVGMGVLPLQFENGQDRKSLKLTGKEVLNIRGLGGELKPHMPLSVEVTREDGSQDSFKVLCRIDTLNEVEYFKAGGILHYVLRSML
Aconitate hydratase A (ACN) (Aconitase) (EC 4.2.1.3) ((2R,3S)-2-methylisocitrate dehydratase) ((2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate dehydratase) (Iron-responsive protein-like) (IRP-like) (Probable 2-methyl-cis-aconitate hydratase) (EC 4.2.1.99) (RNA-binding protein)
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
208,964
910
99,148
4Fe-4S;Iron;Iron-sulfur;Lyase;Metal-binding;Reference proteome;RNA-binding;Tricarboxylic acid cycle
GO:0003729; GO:0003730; GO:0003994; GO:0005506; GO:0005737; GO:0005829; GO:0006099; GO:0006979; GO:0009061; GO:0019679; GO:0030350; GO:0047456; GO:0051539
Inferred from homology
4
null
null
null
PF00330;PF00694;
IPR044137;IPR015931;IPR001030;IPR015928;IPR006249;IPR018136;IPR036008;IPR000573;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Pseudomonadales (order), Pseudomonadaceae (family), Pseudomonas (genus), Pseudomonas aeruginosa group (no rank), Pseudomonas aeruginosa (species)
acnA PA1562
false
Pseudomonas aeruginosa
15
row_90609
false
null
306,195
Q9I0J6
MATIHVDGKTLEVDGADNLLQACLSLGLDIPYFCWHPALGSVGACRQCAVKQYTDENDKRGRLVMSCMTPATDNTWISIEDEEAKQFRASVVEWLMTNHPHDCPVCEEGGHCHLQDMTVMTGHNERRYRFTKRTHQNQELGPFIAHEMNRCIACYRCVRYYKDYAGGTDLGVYGAHDNVYFGRVEDGVLESEFSGNLTEVCPTGVFTDKTHSERYNRKWDMQFAPSICHGCSSGCNISPGERYGEIRRIENRYNGSVNHYFLCDRGRFGYGYVNREDRPRQPLLVLSKQKLSLDGALDQAAALLKERKVVGIGSPRASLESNFALRELVGEGNFYSGINEGELDRLRLILQVMQEGPLPVPSIRDIEDHDAVFVLGEDLTQTAARIALALRQSVKGKAVEMAADMKVQPWLDAAVKNIAQHAQNPLFIASVSATRLDDVAEETVHAAPDDLARLGFAVAHAIDPSAPSVADLDPQAQAFAQRITDALLAAKRPLVVSGNSLGNKALIEAAANIAKALKQREKNGSISLVVGEANSLGLALFGGDSVEAALERLTSGQADAVVVLENDLYRRTDAARVDAALAAAKVVIVADHQQTATTAKAHLVLPAASFAEGDGTLVSQEGRAQRFFQVFDPTYYDARNMVREGWRWLHAIHSTLQGKRVDWTQLDHVTEAVAEAKPILAGIRDAAPAASFRIKGLKLAREPHRYSGRTAMRANISVHEPRTPQDIDSAFAFSMEGYSGSQEDRQQIPFAWSPGWNSPQAWNKFQDEVGGHLRAGDPGVRLIEPKGEGLDWFQAVPVPFSAKADSWKVVPLYHLFGSEENSSRAAPIQQRIPETYVALSKEDADRLGVNDGATLGFQLKGQALRLPLRIDEQLGAGLIGLPVGFAGIPAAIAGCSVEGLQEAAQ
NADH-quinone oxidoreductase subunit G (EC 7.1.1.-) (NADH dehydrogenase I subunit G) (NDH-1 subunit G)
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
208,964
905
99,000
2Fe-2S;4Fe-4S;Iron;Iron-sulfur;Metal-binding;NAD;Quinone;Reference proteome;Translocase;Ubiquinone
GO:0008137; GO:0016020; GO:0022904; GO:0042773; GO:0046872; GO:0048038; GO:0051537; GO:0051539
Inferred from homology
3
null
null
null
PF13510;PF22117;PF04879;PF00384;PF10588;
IPR036010;IPR001041;IPR009010;IPR006656;IPR006963;IPR000283;IPR054351;IPR010228;IPR019574;IPR050123;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Pseudomonadales (order), Pseudomonadaceae (family), Pseudomonas (genus), Pseudomonas aeruginosa group (no rank), Pseudomonas aeruginosa (species)
nuoG PA2642
false
Pseudomonas aeruginosa
16
row_289902
false
null