Datasets:
manufernandezbur
/
tox_nontox_clustered_2025

Dataset card Data Studio Files
xet
Community
1
Unnamed: 0
int64
2
562k
Entry
stringlengths
6
10
Sequence
stringlengths
11
999
Protein names
stringlengths
5
558
Organism
stringclasses
392 values
Organism (ID)
int64
595
2.89M
Length
int64
11
999
Mass
int64
1.06k
118k
Keywords
stringlengths
4
380
⌀
Gene Ontology IDs
stringlengths
10
754
⌀
Protein existence
stringclasses
5 values
Annotation
float64
1
5
Subcellular location [CC]
stringlengths
30
2.26k
⌀
Signal peptide
stringclasses
677 values
Transmembrane
stringlengths
32
2.52k
⌀
Pfam
stringlengths
8
72
⌀
InterPro
stringlengths
10
180
⌀
PDB
stringlengths
5
2.65k
⌀
Taxonomic lineage
stringclasses
178 values
Gene Names
stringlengths
2
299
⌀
Toxin
bool
2 classes
species
stringclasses
111 values
cdhit_cluster
int64
0
4.65k
cdhit_rep
stringlengths
5
10
cdhit_rep_is_ref
bool
1 class
cdhit_pct_id
float64
140,415
A9MH45
MAKILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQNAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLGSVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG
NAD(P)H dehydrogenase (quinone) (EC 1.6.5.2) (Flavoprotein WrbA) (NAD(P)H:quinone oxidoreductase) (NQO)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
198
20,852
Flavoprotein;FMN;NAD;NADP;Nucleotide-binding;Oxidoreductase;Reference proteome
GO:0008753; GO:0010181; GO:0016020; GO:0050136; GO:0050660; GO:0050661; GO:0051287
Inferred from homology
3
null
null
null
PF03358;
IPR008254;IPR029039;IPR010089;IPR005025;IPR037513;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
SARI_01881
false
Salmonella enterica
1,400
row_128299
false
null
140,514
A9MKN4
MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVSEAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTSARLRLIVLLILGFGERNPGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYATDENLLASQLLAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ
Nucleoid occlusion factor SlmA
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
198
22,805
Cell cycle;Cell division;Coiled coil;Cytoplasm;DNA-binding;Reference proteome
GO:0000976; GO:0003700; GO:0005737; GO:0010974; GO:0043590; GO:0051301
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm, nucleoid {ECO:0000255|HAMAP-Rule:MF_01839}.
null
null
PF22276;PF00440;
IPR023772;IPR009057;IPR050109;IPR001647;IPR023769;IPR054580;IPR036271;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
slmA SARI_03909
false
Salmonella enterica
1,401
row_128395
false
null
140,574
A9MPH8
MIEFVYPHTHLVAGVDEVGRGPLVGAVVTAAVILDPARPIVGLNDSKKLSEKRRLALYDEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPALPVPSMAVVKGDSRVAEISAASILAKVTRDAEMAALDIIFPQYGFAQHKGYPTAFHLEKLAQYGATAHHRRSFAPVKRALELAS
Ribonuclease HII (RNase HII) (EC 3.1.26.4)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
198
21,517
Cytoplasm;Endonuclease;Hydrolase;Manganese;Metal-binding;Nuclease;Reference proteome
GO:0003723; GO:0004523; GO:0005737; GO:0006298; GO:0030145; GO:0032299; GO:0043137
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00052}.
null
null
PF01351;
IPR022898;IPR001352;IPR024567;IPR012337;IPR036397;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
rnhB SARI_02772
false
Salmonella enterica
1,402
row_128455
false
null
354,312
A9MYJ4
MSYYAFEGLIPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQYGCIMHGYCDTDTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLAIRCRTGLSETKPLTQVEENRPRLKGTTDVKPKSAQ
Carnitine operon protein CaiE
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
198
21,381
Repeat;Transferase
GO:0009437; GO:0016740
Inferred from homology
2
null
null
null
PF00132;
IPR023446;IPR001451;IPR050484;IPR011004;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
caiE SPAB_00085
false
Salmonella enterica
1,403
row_337357
false
null
419,138
P37928
MLRIAIKEQNSHFEHGLKIIMTRLANQWQQKIDFLPPEEIDNADIAFLALDDDWFSAGCYQIPMHTQHQLRAIICNKCDKEKLMFRPCLYMLPHIYREDDVEEITRKMILILHKRALRHSVPSGICHYCTTRHFSVTERHLLKLIASGYHLSETAALLSLSEEQTKSLRRSIMRKLHVKTEQQFLKYIRVNLHFLLSK
Fimbriae W protein
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
198
23,436
DNA-binding;Fimbrium;Reference proteome;Transcription;Transcription regulation
GO:0003677; GO:0006355; GO:0009289
Predicted
2
SUBCELLULAR LOCATION: Fimbrium {ECO:0000305}.
null
null
PF00196;
IPR016032;IPR000792;IPR036388;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
fimW STM0552
false
Salmonella enterica
1,404
row_401346
false
null
90,016
Q5PMK9
MQKVVLATGNAGKVRELASLLSDFGLDVVAQTELGVDSAEETGLTFIENAILKARHAAKMTGLPAIADDSGLAVDVLGGAPGIYSARYSGENATDQQNLEKLLHTLRDVPDDKRQARFHCVLVYLRHAEDPTPIVCHGSWPGVITRQAAGNGGFGYDPIFFVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNG
dITP/XTP pyrophosphatase (EC 3.6.1.66) (Non-canonical purine NTP pyrophosphatase) (Non-standard purine NTP pyrophosphatase) (Nucleoside-triphosphate diphosphatase) (Nucleoside-triphosphate pyrophosphatase) (NTPase)
Salmonella paratyphi A (strain ATCC 9150 / SARB42)
295,319
197
21,033
Hydrolase;Magnesium;Metal-binding;Nucleotide metabolism;Nucleotide-binding
GO:0000166; GO:0005829; GO:0009117; GO:0009146; GO:0017111; GO:0035870; GO:0036220; GO:0036222; GO:0046872
Inferred from homology
4
null
null
null
PF01725;
IPR020922;IPR029001;IPR002637;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi A (no rank)
rdgB SPA2966
false
Salmonella enterica
1,405
row_79854
false
null
205,776
P58630
MTTLYLASGSPRRQELLTQLGFSFEQVVPGIEEQRRAQESAQQYVVRLAREKAQAGVALVPRDLPVLGADTIVVLNGEVLEKPRDAAHAAEMLRLLSGNTHQVMTAVALADSQQTLDCLVVTEVTFRTLSAQDITGYVASGEPLDKAGAYGIQGRGGCFVRKINGSYHAVVGLPLVETYELLSHFNALRDKRDKHDG
dTTP/UTP pyrophosphatase (dTTPase/UTPase) (EC 3.6.1.9) (Nucleoside triphosphate pyrophosphatase) (Nucleotide pyrophosphatase) (Nucleotide PPase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
197
21,416
Cytoplasm;Hydrolase;Nucleotide metabolism;Reference proteome
GO:0005737; GO:0009117; GO:0036218; GO:0036221; GO:0047429
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00528, ECO:0000305}.
null
null
PF02545;
IPR029001;IPR003697;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
yhdE STM3371
false
Salmonella enterica
1,406
row_192226
false
null
23,655
P55880
MSAQALVCLAPGSEETEAVTTIDLLVRGGIHVTTASVASDGNLTIVCSRGVKLLADAPLVEVADGDYDIIVLPGGIKGAECFRDSPLLVETVKQFHRSGRIVAAICAAAATVLVPHDIFPIGNMTGFPALKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLAGREKAHEVASQLVMAAGIYNYYE
Protein/nucleic acid deglycase YajL (EC 3.1.2.-) (EC 3.5.1.-) (EC 3.5.1.124) (Chaperone protein YajL) (Maillard deglycase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
196
20,767
Chaperone;DNA damage;DNA repair;Hydrolase;Oxidation;Reference proteome;Stress response
GO:0005737; GO:0006281; GO:0036524
Inferred from homology
5
null
null
null
PF01965;
IPR029062;IPR006287;IPR002818;IPR050325;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
yajL STM0433
false
Salmonella enterica
1,407
row_20539
false
null
76,302
P31570
MSDERYQQRQQKVKDRVDARVAQAQEERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPHGVEFQVMATGFTWETQNREADTAACMAVWQHGKRMLADPLLDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITGRGCHRDILDLADTVSELRPVKHAFDAGVKAQMGIDY
Corrinoid adenosyltransferase CobA (EC 2.5.1.17) (Cob(II)alamin adenosyltransferase) (Cob(II)yrinic acid a,c-diamide adenosyltransferase) (Cobinamide/cobalamin adenosyltransferase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
196
21,726
3D-structure;ATP-binding;Cobalamin biosynthesis;Cytoplasm;Direct protein sequencing;Nucleotide-binding;Porphyrin biosynthesis;Reference proteome;Transferase
GO:0005524; GO:0005737; GO:0006779; GO:0008817; GO:0009236
Evidence at protein level
4
SUBCELLULAR LOCATION: Cytoplasm.
null
null
PF02572;
IPR003724;IPR027417;
1G5R;1G5T;1G64;4HUT;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
btuR cobA STM1718
false
Salmonella enterica
1,408
row_66997
false
null
94,068
Q7BVH7
MSSGNILWGSQNPIVFKNSFGVSNADTGSQDDLSQQNPFAEGYGVLLILLMVIQAIANNKFIEVQKNAERARNTQEKSNEMDEVIAKAAKGDAKTKEEVPEDVIKYMRDNGILIDGMTIDDYMAKYGDHGKLDKGGLQAIKAALDNDANRNTDLMSQGQITIQKMSQELNAVLTQLTGLISKWGEISSMIAQKTYS
Secreted effector protein SseB (Secretion system effector B)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
196
21,495
Protein transport;Reference proteome;Secreted;Transport;Virulence
GO:0005576; GO:0005829; GO:0009986; GO:0030254
Evidence at protein level
4
SUBCELLULAR LOCATION: Secreted {ECO:0000269|PubMed:11567004}. Cell surface {ECO:0000269|PubMed:11567004}. Note=Secreted via type III secretion system 2 (SPI-2 T3SS). After secretion, localizes mainly on the surface of the bacterial cell.
null
null
PF03433;
IPR005095;IPR035074;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
sseB STM1398
false
Salmonella enterica
1,409
row_83563
false
null
190,183
P0A1R4
MNVVILDTGCANLSSVKSAVARHGYTPVVSREAEIVLRADKLFLPGVGTAQAAMDQLRERELIDLIKACTQPVLGICLGMQLLGRRSEETRGVDLLNIIEQDVPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYGEPFTAAVQKDNFFGVQFHPERSGAAGAQLLKNFLEM
Imidazole glycerol phosphate synthase subunit HisH (EC 4.3.2.10) (IGP synthase glutaminase subunit) (EC 3.5.1.2) (IGP synthase subunit HisH) (ImGP synthase subunit HisH) (IGPS subunit HisH)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
196
21,704
Amino-acid biosynthesis;Cytoplasm;Glutamine amidotransferase;Histidine biosynthesis;Hydrolase;Lyase;Reference proteome
GO:0000105; GO:0000107; GO:0004359; GO:0005737; GO:0016829
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
null
null
PF00117;
IPR029062;IPR017926;IPR010139;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
hisH STM2075
false
Salmonella enterica
1,410
row_177030
false
null
207,963
P66030
MQLKRVAEAKLPTPLGDFLMVGFEELATGHDHAALVFGDISGKTPVLARVHSECLTGDALFSLRCDCGFQLEAALTHIAEEGRGILIYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVDEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNEHYLDTKAAKMGHLLSK
GTP cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
196
21,635
GTP-binding;Hydrolase;Metal-binding;Nucleotide-binding;Reference proteome;Riboflavin biosynthesis;Zinc
GO:0003935; GO:0005525; GO:0005829; GO:0008270; GO:0009231
Inferred from homology
3
null
null
null
PF00925;
IPR032677;IPR000926;IPR036144;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
ribA STM1711
false
Salmonella enterica
1,411
row_194385
false
null
298,140
Q8Z8H6
MRYLVTLLLSLAVLVTAGCGWHLRSTTQVPASMKTMILDSGDPNGPLSRAVRNQLRLNNVNLLDKDTTRKDVPSLRLGTVTISQDTASVFQDGQTAEYQMVMTVNASVLIPGHDIYPISTKVYRSFFDNPQMALAKDNEQAMIVQEMYDKAAEQLIRKLASVRAADIQATKEEATADNETAAPASTPARVSTTLSN
LPS-assembly lipoprotein LptE
Salmonella typhi
90,370
196
21,401
Cell outer membrane;Lipoprotein;Membrane;Palmitate;Signal
GO:0001530; GO:0009279; GO:0015920; GO:0043165; GO:1990351
Inferred from homology
3
SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-Rule:MF_01186}; Lipid-anchor {ECO:0000255|HAMAP-Rule:MF_01186}.
SIGNAL 1..18; /evidence="ECO:0000255|HAMAP-Rule:MF_01186"
null
PF04390;
IPR007485;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
lptE rlpB STY0698 t2220
false
Salmonella enterica
1,412
row_282035
false
null
354,484
A9N712
MLERIKVCFTESIQTQIAAAEALPDAISRAAMTLVHSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRIPSHHSARIQEMHMLTVNCLCDLIDNTLFPHQDD
DnaA initiator-associating protein DiaA
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
196
21,109
DNA replication
GO:0006260; GO:0097367; GO:1901135
Inferred from homology
2
null
null
null
PF13580;
IPR023070;IPR035461;IPR001347;IPR046348;IPR050099;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
diaA SPAB_04077
false
Salmonella enterica
1,413
row_337528
false
null
373,698
B4T2B9
MSSKEQKTPEGQAPEEIIMDQHEEVEAVEPNDSAEQVDPRDEKIANLEVQLAEAQTRERDTVLRIKAEMENLRRRTEQDIEKAHKFALEKFVNELLPVIDSLDRALEVADKANPDMAAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESEEVPAGNVLGIMQKGYTLNGRTIRAAMVTVAKAK
Protein GrpE (HSP-70 cofactor)
Salmonella newport (strain SL254)
423,368
196
21,841
Chaperone;Cytoplasm;Stress response
GO:0000774; GO:0005829; GO:0006457; GO:0042803; GO:0051082; GO:0051087
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01151}.
null
null
PF01025;
IPR000740;IPR013805;IPR009012;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella newport (no rank)
grpE SNSL254_A2895
false
Salmonella enterica
1,414
row_356456
false
null
417,377
P27667
MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIVLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCYLTPDIAVKLAAGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLLEKLGVSNDVELAHRMFDGW
Transcriptional regulatory protein UhpA
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
196
20,790
Activator;Cytoplasm;DNA-binding;Phosphoprotein;Reference proteome;Transcription;Transcription regulation;Two-component regulatory system
GO:0000160; GO:0003677; GO:0005737; GO:0006355
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}.
null
null
PF00196;PF00072;
IPR011006;IPR016032;IPR001789;IPR000792;IPR039420;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
uhpA STM3790
false
Salmonella enterica
1,415
row_399627
false
null
539,419
P0A1U4
MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCKQTEFGDGQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIPAADDYDLYGVYPAIDACVALSELMHSRLSGETLEHAIEVSKTSITTVAMLEMTQAGREMTDEELKTNPAVEQEWDIQWEIFRLLADCEERDIELIKGLRADLREAGESNIGINFQQ
Uncharacterized protein YjaG
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
196
22,704
Reference proteome
null
Predicted
1
null
null
null
PF04222;
IPR007338;IPR023381;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
yjaG STM4169 STMF1.23
false
Salmonella enterica
1,416
row_519708
false
null
55,215
Q9R803
MEASNVALVLPAPSLLTPSSTPSPSGEGMGTESMLLLFDDIWMKLMELAKKLRDIMRSYNVEKQRLAWELQVNVLQTQMKTIDEAFRASMITAGGAMLSGVLTIGLGAVGGETGLIAGQAVGHTAGGVMGLGAGVAQRQSDQDKAIADLQQNGAQSYNKSLTEIMEKATEIMQQIIGVGSSLVTVLAEILRALTR
SPI-2 type 3 secretion system translocon protein SctB (SPI-2 T3SS translocon protein SctB) (Secreted effector protein SseD) (Secretion system effector D)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
195
20,592
Coiled coil;Direct protein sequencing;Host membrane;Membrane;Reference proteome;Secreted;Transmembrane;Transmembrane helix;Virulence
GO:0005576; GO:0009986; GO:0016020; GO:0030254; GO:0033644
Evidence at protein level
5
SUBCELLULAR LOCATION: Secreted {ECO:0000269|PubMed:11159962, ECO:0000269|PubMed:11567004}. Cell surface {ECO:0000269|PubMed:11159962, ECO:0000269|PubMed:11567004}. Host membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000255}. Note=Secreted via the type III secretion system 2 (SPI-2 T3SS) (PubMed:11159962, PubMed:11567004). After secretion, localizes mainly on the surface of the bacterial cell (PubMed:11159962, PubMed:11567004). {ECO:0000269|PubMed:11159962, ECO:0000269|PubMed:11567004}.
null
TRANSMEM 90..110; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 115..135; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 170..190; /note="Helical"; /evidence="ECO:0000255"
PF05802;
IPR008611;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
sctB2 sseD STM1401
false
Salmonella enterica
1,417
row_47858
false
null
473,639
Q57L56
MTPMLLSAFWTYTLITALTPGPNNILALSAATAHGFRQSIRVLAGMSLGFLVVMLLCAGIAFSLAVIDPAIIHLLSWVGAAYILWLAWKIATSPAADENARPKPVGFWVSFGLQFVNVKIILYGITALSTFVLPQTQALNWVIGVSILLALIGTFGNVCWALAGHLFQRAFRHYGRQLNIILALLLVYCAVRIFY
Cysteine/O-acetylserine efflux protein
Salmonella choleraesuis (strain SC-B67)
321,314
195
21,293
Amino-acid transport;Cell inner membrane;Cell membrane;Membrane;Transmembrane;Transmembrane helix;Transport
GO:0005886; GO:0015171; GO:0033228
Inferred from homology
2
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000250|UniProtKB:P38101}; Multi-pass membrane protein {ECO:0000255}.
null
TRANSMEM 10..32; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 47..67; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 70..90; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 105..125; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 142..162; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 177..194; /note="Helical"; /evidence="ECO:0000255"
PF01810;
IPR001123;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella enterica subsp. enterica serovar Choleraesuis (no rank)
eamB SCH_2650
false
Salmonella enterica
1,418
row_454793
false
null
59,627
A0A0F6B281
MAIKLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMASFYRIQPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLAKATSRLHTFKAQ
Peptidyl-tRNA hydrolase (Pth) (EC 3.1.1.29)
Salmonella typhimurium (strain 14028s / SGSC 2262)
588,858
194
21,178
Cytoplasm;Hydrolase;RNA-binding;tRNA-binding
GO:0000049; GO:0004045; GO:0005737; GO:0006515; GO:0072344
Evidence at protein level
4
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00083}.
null
null
PF01195;
IPR001328;IPR018171;IPR036416;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank), Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (strain)
pth STM14_2156
false
Salmonella enterica
1,419
row_51579
false
null
205,774
P58627
MPRLILASTSPWRRALLEKLTIPFECAAPDVDETPMPGEAPRQLVLRLAQAKAQSLAARFPNHLIIGSDQICVLDGEITGKPLTEEKARQQLAKASGNIVTFYTGLALYNSASGHLQTEVEPFDVHFRHLSEAEIDDYVRKEHPLHCAGSFKSEGLGIALFERLEGRDPNTLIGLPLIALCQMLRREGFNPLQQ
7-methyl-GTP pyrophosphatase (m(7)GTP pyrophosphatase) (EC 3.6.1.-)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
194
21,493
Cytoplasm;Hydrolase;Nucleotide metabolism;Reference proteome
GO:0005737; GO:0009117; GO:0047429
Evidence at protein level
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00528, ECO:0000305}.
null
null
PF02545;
IPR029001;IPR003697;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
yceF STM1189
false
Salmonella enterica
1,420
row_192224
false
null
297,927
Q8Z2R9
MNLDEVITGVVLAGGKARRMGGADKGLLELDGKPLWRHVADALAPQLATVVISANRHLDIYQASGLKVIPDSIADFPGPLAGMLSVFQQVAGDWFLFCPCDNPCIPHNLVDRLAAHRHGAPVVWVHDGERDHPTIALINRAVEPQLTAYLQAGERRVMIFMRQVGGHAVDFSDCKEAFVNVNTPEELAQWQKRP
Molybdenum cofactor guanylyltransferase (MoCo guanylyltransferase) (EC 2.7.7.77) (GTP:molybdopterin guanylyltransferase) (Mo-MPT guanylyltransferase) (Molybdopterin guanylyltransferase) (Molybdopterin-guanine dinucleotide synthase) (MGD synthase)
Salmonella typhi
90,370
194
21,256
Cytoplasm;GTP-binding;Magnesium;Metal-binding;Molybdenum cofactor biosynthesis;Nucleotide-binding;Transferase
GO:0005525; GO:0005737; GO:0046872; GO:0061603; GO:1902758
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00316}.
null
null
PF12804;
IPR025877;IPR013482;IPR029044;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
mobA STY3886 t3626
false
Salmonella enterica
1,421
row_281825
false
null
354,224
A9MUE1
MIGLRPAFSTMLFLLLLTGGVYPLLTTALGQWWFPWQANGSLIHKDNVIRGSALIGQSFTAAGYFHGRPSATADTPYNPLASGGSNLAASNPELDAQIQARVAALRAANPQASSAVPVELATASASGLDNNLTPGAAAWQIPRVAAARQLPVEQVAQLVAEYTHRPLARFLGQPVVNIVELNLALDALQGHRAK
Potassium-transporting ATPase KdpC subunit (ATP phosphohydrolase [potassium-transporting] C chain) (Potassium-binding and translocating subunit C) (Potassium-translocating ATPase C chain)
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
194
20,439
ATP-binding;Cell inner membrane;Cell membrane;Ion transport;Membrane;Nucleotide-binding;Potassium;Potassium transport;Transmembrane;Transmembrane helix;Transport
GO:0005524; GO:0005886; GO:0008556
Inferred from homology
2
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_00276}; Single-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_00276}.
null
TRANSMEM 12..34; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00276"
PF02669;
IPR003820;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
kdpC SPAB_02832
false
Salmonella enterica
1,422
row_337269
false
null
540,945
P14493
MSDEIKQIAALIGHHQALEKRVTSLTEQFQAASSQLQQQSETLSRVIRELDSASGNMTDTVRKSVSSALTQVEKELKQAGLAQQKPATEALNQAADTAKAMIHEMRREMSRYTWKSAIYLVLTIFFVLASCVTAFTWFMNDGYSQIAEMQRMEAVWQKKAPLADISRCDGKPCVKVDTRTTYGDKENTWMIIKK
22 kDa relaxation protein
Salmonella typhimurium
90,371
194
21,886
Plasmid
null
Predicted
1
null
null
null
null
null
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
null
false
Salmonella enterica
1,423
row_521219
false
null
98,595
Q8ZR43
MARPKSEDKKQALLEAATQAIAQSGIAASTAVIARNAGVAEGTLFRYFATKDELINTLYLHLKQDLCQSMIMELDRSITDAKMMTRFIWNSYISWGLNHPARHRAIRQLAVSEKLTKETEQRADDMFPELRDLCHRSVLMVFMSDEYRAFGDGLFLALAETTMDFAARDPARAGEYIALGFEAMWRALTREEQ
Transcriptional regulator RamR (HTH-type transcriptional regulator RamR) (Local repressor of ramA)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
193
21,917
3D-structure;DNA-binding;Reference proteome;Repressor;RNA-binding;Transcription;Transcription regulation
GO:0003677; GO:0003723
Evidence at protein level
4
null
null
null
PF00440;
IPR023772;IPR009057;IPR050109;IPR001647;
3VVX;3VVY;3VVZ;3VW0;3VW1;3VW2;6IE8;6IE9;6KO7;6KO8;6KO9;7N4Z;7N53;7N54;9GTV;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
ramR STM0580
false
Salmonella enterica
1,424
row_87761
false
null
140,524
A9MKX9
MRLCDRDIEAWLDEGRLSITPRPPVERINGATVDVRLGNKFRTFRGHTAAFIDLSGPKDEVSAALDRVMSDEIVLPDGEAFYLHPGELALAVTYESVTLPPDLVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSFEPLSGPAARPYNRRQDAKYRDQQGAVASRIDKD
dCTP deaminase (EC 3.5.4.13) (Deoxycytidine triphosphate deaminase)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
193
21,252
Hydrolase;Nucleotide metabolism;Nucleotide-binding;Reference proteome
GO:0000166; GO:0006226; GO:0006229; GO:0008829; GO:0015949
Inferred from homology
3
null
null
null
PF22769;
IPR011962;IPR036157;IPR033704;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
dcd SARI_00775
false
Salmonella enterica
1,425
row_128405
false
null
172,023
C0PW57
MNGMAVVMIIRKYFLIIALLVMPWLAIPSVSAADKGGFNTFTDNVAETWRQPEHYDLYVPAITWHARFAYDKEKTDRYNERPWGVGFGQSRWDDKGNWHGLYMMAFKDSFNKWEPIGGYGWEKTWRPLEDDNFRLGLGFTAGVTARDNWNYIPIPVLLPLASIGYGPATFQMTYIPGSYNNGNVYFAWMRFQF
Lipid A acyltransferase PagP (EC 2.3.1.251) (Lipid A acylation protein)
Salmonella paratyphi C (strain RKS4594)
476,213
193
22,424
Acyltransferase;Cell outer membrane;Membrane;Signal;Transferase
GO:0009245; GO:0009279; GO:0016746
Inferred from homology
3
SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-Rule:MF_00837}.
SIGNAL 1..32; /evidence="ECO:0000255|HAMAP-Rule:MF_00837"
null
PF07017;
IPR009746;IPR011250;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella enterica subsp. enterica serovar Paratyphi C (no rank)
pagP SPC_0643
false
Salmonella enterica
1,426
row_159342
false
null
190,255
P0A2F4
MSFELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIVRTSEGGIFNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAIKNFGSGWTWLVKSADGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPNYLEHFWALVNWEFVAKNLAA
Superoxide dismutase [Fe] (EC 1.15.1.1)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
193
21,308
Iron;Metal-binding;Oxidoreductase;Reference proteome
GO:0004784; GO:0046872
Inferred from homology
3
null
null
null
PF02777;PF00081;
IPR001189;IPR019833;IPR019832;IPR019831;IPR036324;IPR036314;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
sodB STM1431
false
Salmonella enterica
1,427
row_177102
false
null
354,026
A9MM59
MNFLAHLHLAHLADSSLSGNLLADFVRGNPATHYPPDVVEGIYMHRRIDAMTDNLPEVREAREWFRHETRRVAPITLDVMWDHFLSRHWTQISPDFPLQSFIGYAHAQVATILPDSPPRFVNLNDYLWSEKWLERYRDMDFIQNVLNGMANRRPRLDALRDSWYDLDAHYDALEERFWHFYPRMMAQAARKAL
Acyl carrier protein phosphodiesterase (ACP phosphodiesterase) (EC 3.1.4.14)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
193
22,919
Fatty acid biosynthesis;Fatty acid metabolism;Hydrolase;Lipid biosynthesis;Lipid metabolism;Reference proteome
GO:0006633; GO:0008770
Inferred from homology
2
null
null
null
PF04336;
IPR007431;IPR023491;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
acpH SARI_02522
false
Salmonella enterica
1,428
row_337071
false
null
354,164
A9MRW5
MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLDLVYLRTLSFILVIAVVVQFTEMVVRKTSPALYRLLGIFLPLITTNCAVLGVALLNINLGHHFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMGFSGLVKL
Ion-translocating oxidoreductase complex subunit A (EC 7.-.-.-) (Rsx electron transport complex subunit A)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
193
20,895
Cell inner membrane;Cell membrane;Electron transport;Membrane;Reference proteome;Translocase;Transmembrane;Transmembrane helix;Transport
GO:0005886; GO:0022900
Inferred from homology
2
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_00459}; Multi-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_00459}.
null
TRANSMEM 5..25; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00459"; TRANSMEM 47..67; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00459"; TRANSMEM 72..92; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00459"; TRANSMEM 102..122; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00459"; TRANSMEM 134..154; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00459"; TRANSMEM 171..191; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00459"
PF02508;
IPR011293;IPR003667;IPR050133;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
rsxA SARI_01522
false
Salmonella enterica
1,429
row_337209
false
null
69,147
O52222
MSEKSIVQEARDIQLAMELINLGARLQMLESETQLSRGRLIRLYKELRGSPPPKGMLPFSTDWFMTWEQNIHASMFCNAWQFLLKTGLCSGVDAVIKAYRLYLEQCPQPPEGPLLALTRAWTLVRFVESGLLELSSCNCCGGNFITHAHQPVGSFACSLCQPPSRAVKRRKLSRDAADIIPQLLDEQIEQAV
Flagellar transcriptional regulator FlhC
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
192
21,579
Activator;Bacterial flagellum biogenesis;Cytoplasm;DNA-binding;Metal-binding;Nucleotide-binding;Phosphoprotein;Reference proteome;Transcription;Transcription regulation;Zinc
GO:0003677; GO:0005737; GO:0008270; GO:0044781; GO:0045893; GO:1902208
Evidence at protein level
4
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01891}.
null
null
PF05280;
IPR007944;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
flhC STM1924
false
Salmonella enterica
1,430
row_60151
false
null
79,860
P63223
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVSNDFGYDYIFSRYVEAVGREGDVLLGISTSGNSGNVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMVK
Phosphoheptose isomerase (EC 5.3.1.28) (Sedoheptulose 7-phosphate isomerase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
192
20,896
Carbohydrate metabolism;Cytoplasm;Isomerase;Lipopolysaccharide biosynthesis;Metal-binding;Reference proteome;Zinc
GO:0005829; GO:0008270; GO:0008968; GO:0009244; GO:0097367; GO:2001061
Inferred from homology
4
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00067}.
null
null
PF13580;
IPR035461;IPR004515;IPR001347;IPR046348;IPR050099;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
gmhA lpcA STM0310
false
Salmonella enterica
1,431
row_70384
false
null
140,631
A9MRW7
MNTIWIAVGALTFLGLVFGAILGYASRRFAVEDDPVVEKIDAILPQSQCGQCGYPGCRPYAEAVGLQGEKINRCAPGGEAVMLKIADLLNVEPQPCDAEEQQAAPVRMLAVIDENHCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCIELRPVNETPDSWKWDLNTIPVRIIPVEQHA
Ion-translocating oxidoreductase complex subunit B (EC 7.-.-.-) (Rsx electron transport complex subunit B)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
192
20,716
4Fe-4S;Cell inner membrane;Cell membrane;Electron transport;Iron;Iron-sulfur;Membrane;Metal-binding;Reference proteome;Repeat;Translocase;Transport
GO:0005886; GO:0009055; GO:0022900; GO:0046872; GO:0051539
Inferred from homology
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_00463}.
null
null
PF14697;PF04060;
IPR007202;IPR017896;IPR017900;IPR050395;IPR010207;IPR016463;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
rsxB SARI_01523
false
Salmonella enterica
1,432
row_128511
false
null
190,159
P0A1I1
MNHLTNQYVMLHDEKRCIGCQACTVACKVLNDVPEGFSRVQVQIRAPEQASNALTHFQFVRVSCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAACPFHVRYLNPQTGVADKCNFCADTRLAAGQSPACVSVCPTDALKFGRLDESEIQRWVGQKEVYRQQEARSGAVSLYRRKEVHQEGKA
Thiosulfate reductase electron transfer subunit PhsB (Thiosulfate reductase subunit beta)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
192
21,320
4Fe-4S;Cell inner membrane;Cell membrane;Electron transport;Iron;Iron-sulfur;Membrane;Metal-binding;Reference proteome;Repeat;Transport
GO:0005886; GO:0046872; GO:0051539
Evidence at protein level
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000305|PubMed:22081391}; Peripheral membrane protein {ECO:0000305|PubMed:22081391}; Periplasmic side {ECO:0000305|PubMed:22081391}.
null
null
PF13247;PF12797;
IPR017896;IPR017900;IPR050954;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
phsB STM2064
false
Salmonella enterica
1,433
row_177006
false
null
215,731
Q05632
MKDELFLRGENVPMTKEAVRALALSKLELHRASHLIDVGAGTGSVSIEAALQFPSLQVTAIERNPAALRLLDENRQRFACGNIDILPGEAPMTITGKADAVFMGGSGGHLTALIDWAMGHLHPGGRLVMTFILQENLHSALAHLAHIGACRMDCVQLQLSSLTPLGAGHYFKPNNPVFVIACQKEENHVRDI
Cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) (EC 2.1.1.196)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
192
20,746
Cobalamin biosynthesis;Direct protein sequencing;Methyltransferase;Reference proteome;S-adenosyl-L-methionine;Transferase
GO:0008276; GO:0009236; GO:0032259; GO:0043776
Evidence at protein level
3
null
null
null
PF05175;
IPR014008;IPR050714;IPR029063;IPR007848;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
cbiT STM2030
false
Salmonella enterica
1,434
row_201870
false
null
354,247
A9MVU1
MDTSRLTLDHFLSRFQLLRPQMTHETLNQRQAAVLIPVVRRPQPGLLLTQRAIHLRKHAGQVAFPGGAVDSTDASLIAAALREAQEEVAIPPQAVEVIGVLPPVDSVTGFQVTPVVGIIPPNLPWRASEDEVSAVFEMPLAQALQLGRYHPLDVYRRGNSHRVWLSWYEHYFVWGMTANILRELALQIGVKP
Uncharacterized Nudix hydrolase NudL (EC 3.6.1.-)
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
192
21,431
Hydrolase;Magnesium;Manganese;Metal-binding
GO:0000287; GO:0009132; GO:0010945; GO:0030145
Inferred from homology
2
null
null
null
PF00293;
IPR045121;IPR015797;IPR000086;IPR000059;IPR023735;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
nudL SPAB_01389
false
Salmonella enterica
1,435
row_337292
false
null
514,057
Q8Z259
MYQIVLGKVSTLSAGQLPDALIAQAPQGVRRASWLAGRVLLSRALSPLPEMVYGEQGKPAFSAGTPLWFNLSHSGDTIALLLSDEGEVGCDIEVIRPRDNWRSLANAVFSLGEHAEMEAERPERQLAAFWRIWTRKEAIVKQRGGSAWQIVSVDSTLPSALSVSQCQLDTLSLAVCTPTPFTLTPQTITKAL
4'-phosphopantetheinyl transferase AcpT (EC 2.7.8.7)
Salmonella typhi
90,370
192
20,871
Transferase
GO:0000287; GO:0005829; GO:0008897; GO:0019878
Inferred from homology
2
null
null
null
PF01648;
IPR008278;IPR037143;IPR050559;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
acpT STY4228 t3939
false
Salmonella enterica
1,436
row_494593
false
null
533,274
B4T555
MSIQNEMPGYNEMNRFLNQQGAGLTPAEMHGLISGMICGGNNDSSWQPLLHDLTNEGLAFGHELAQALRKMHAATSDALEDDGFLFQLYLPEGDDVSVFDRADALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDESEDQEELEMSLEEIIEYVRVAALLCHDTFTRQQPTAPEVRKPTLH
UPF0149 protein YgfB
Salmonella newport (strain SL254)
423,368
192
21,257
null
GO:0005829
Inferred from homology
1
null
null
null
PF03695;
IPR011978;IPR036255;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella newport (no rank)
ygfB SNSL254_A3295
false
Salmonella enterica
1,437
row_513591
false
null
66,105
D0ZSY9
MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQESFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR
ECF RNA polymerase sigma-E factor (RNA polymerase sigma-E factor)
Salmonella typhimurium (strain 14028s / SGSC 2262)
588,858
191
21,712
Cytoplasm;DNA-binding;Sigma factor;Stress response;Transcription;Transcription regulation;Virulence
GO:0003677; GO:0005737; GO:0006352; GO:0009266; GO:0016987; GO:0097533
Evidence at transcript level
4
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}. Note=Associates with the inner membrane via RseA. {ECO:0000305}.
null
null
PF04542;PF08281;
IPR039425;IPR014284;IPR000838;IPR007627;IPR013249;IPR014286;IPR013325;IPR013324;IPR036388;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank), Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (strain)
rpoE sigE STM14_3234
false
Salmonella enterica
1,438
row_57452
false
null
140,440
A9MHR4
MSQNITLIKDKILSDNYFTLRNITYDLTRRNGKVIRHKREVYDRGNGATILLYNSTKKTVVLVRQFRVATWVNGNEDGMLIETCAGLLDNDEPEVCIRKEAIEETGYDVGEVRKIFELYMSPGGVTELIHFFIAEYRDSERASTGGGVEDEDIEVLELPFSRALEMARSGEIRDGKTVLLLNYLHMSHLMG
GDP-mannose pyrophosphatase (EC 3.6.1.-) (GDP-mannose hydrolase) (GDPMK)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
191
21,769
Hydrolase;Magnesium;Metal-binding;Reference proteome
GO:0005829; GO:0006753; GO:0016818; GO:0019693; GO:0046872
Inferred from homology
3
null
null
null
PF00293;
IPR004385;IPR015797;IPR000086;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
nudK SARI_00406
false
Salmonella enterica
1,439
row_128322
false
null
276,797
Q7CPQ6
MKAFSPLAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLELRVSSALSKDEQIKKETRINVTAYQGKVLLVGQSPNSELSARAKQIAMGVEGTTEVYNEIRQGQPIGLGTASNDTWITTKVRSQLLTSDQVKSSNVKVTTENGEVFLLGLVTEREGKAAADIASRVSGVKRVTTAFTYIK
Outer membrane lipoprotein DolP
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
191
20,097
Cell outer membrane;Lipoprotein;Membrane;Palmitate;Reference proteome;Signal;Virulence
GO:0009279
Evidence at transcript level
3
SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000269|PubMed:30201701}; Lipid-anchor {ECO:0000255|PROSITE-ProRule:PRU00303}; Periplasmic side {ECO:0000250|UniProtKB:P64596}.
SIGNAL 1..18; /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
null
PF04972;
IPR007055;IPR051686;IPR014004;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
dolP yraP STM3267
false
Salmonella enterica
1,440
row_261186
false
null
354,031
A9MMB3
MIRISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYVLQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRDLTEHQRGEHSYY
Fe/S biogenesis protein NfuA
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
191
20,966
4Fe-4S;Iron;Iron-sulfur;Metal-binding;Reference proteome
GO:0005506; GO:0016226; GO:0051539; GO:0051604
Inferred from homology
2
null
null
null
PF01521;PF01106;
IPR017726;IPR000361;IPR034904;IPR035903;IPR001075;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
nfuA SARI_04103
false
Salmonella enterica
1,441
row_337076
false
null
424,829
P61351
MKKNLLGFTLASLLFTTGSAVAAEYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPSADKVNVTINTNSVDTNHAERDKHLRSAEFLNVAKFPQATFTSTSVKKEGDELDITGNLTLNGVTKPVTLEAKLMGQGDDPWGGKRAGFEAEGKIKLKDFNITTDLGPASQEVELIISVEGVQQK
Protein YceI
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
191
21,023
Periplasm;Reference proteome;Signal
GO:0005615; GO:0042597
Inferred from homology
2
SUBCELLULAR LOCATION: Periplasm {ECO:0000255|HAMAP-Rule:MF_00780}.
SIGNAL 1..22; /evidence="ECO:0000255|HAMAP-Rule:MF_00780"
null
PF04264;
IPR007372;IPR036761;IPR023480;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
yceI STM1157
false
Salmonella enterica
1,442
row_406939
false
null
542,714
P40784
MPFKMSSKAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPSSHIAVFDAETQTWNLKEDHRGETVYDTTTGNQMYISEPGPLPENVTSVSPGGGYKKWDSKAKAWVNDEGAEVAARLREAEGTKSRLLQMASGKIAPLQDAVDLGIATDDEKAQLDEWKKYRVLVNRVDTSNPDWPEQPV
Tail fiber assembly protein homolog from lambdoid prophage Fels-1
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
191
21,001
Reference proteome
null
Inferred from homology
1
null
null
null
PF02413;
IPR003458;IPR051220;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
ycdD STM0927
false
Salmonella enterica
1,443
row_522971
false
null
140,550
A9MN84
MNNNLPTGSIAAAVDLLNKENVIAYPTEAVFGVGCDPDSETAVTRLLELKQRPVDKGLILIAASFEQLKPYIDDSILTTAQRKAVFDCWPGPVTFVFPASATTPRWLTGRFDSLAVRVTDHPLVVALCNAYGKPLVSTSANLSGLPPCRTVEEVRAQFGDDFPMVEGATGGRLNPSEIRDALTGELFRQG
Threonylcarbamoyl-AMP synthase (TC-AMP synthase) (EC 2.7.7.87) (L-threonylcarbamoyladenylate synthase) (t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC) (tRNA threonylcarbamoyladenosine biosynthesis protein TsaC)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
190
20,463
ATP-binding;Cytoplasm;Nucleotide-binding;Nucleotidyltransferase;Reference proteome;Transferase;tRNA processing
GO:0000049; GO:0002949; GO:0003725; GO:0005524; GO:0005737; GO:0006450; GO:0061710
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01852}.
null
null
PF01300;
IPR017945;IPR006070;IPR023535;IPR050156;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
tsaC rimN SARI_04225
false
Salmonella enterica
1,444
row_128431
false
null
188,602
P03013
MATIGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWKLDRLGRSVKNLVALISELHERGAHFHSLTDSIDTSSAMGRFFFHVMSALAEMERELIVERTLAGLAAARAQGRLGGRPRAINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYFPASRIKKRMN
DNA-invertase hin
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
190
21,426
3D-structure;DNA integration;DNA invertase;DNA recombination;DNA-binding;Reference proteome
GO:0000150; GO:0003677; GO:0006310; GO:0015074
Evidence at protein level
3
null
null
null
PF02796;PF00239;
IPR009057;IPR006118;IPR006119;IPR036162;IPR006120;IPR050639;
1HCR;1IJW;1JJ6;1JJ8;1JKO;1JKP;1JKQ;1JKR;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
hin STM2772
false
Salmonella enterica
1,445
row_175487
false
null
196,358
P20753
MLKSTLAAVAAVFALSALSPAALAAKGDPHVLLTTSAGNIELELNSQKAPVSVKNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFNEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPTKPVVILSAKVLP
Peptidyl-prolyl cis-trans isomerase A (PPIase A) (EC 5.2.1.8) (Rotamase A)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
190
20,332
Isomerase;Periplasm;Reference proteome;Rotamase;Signal
GO:0003755; GO:0006457; GO:0042597
Inferred from homology
3
SUBCELLULAR LOCATION: Periplasm {ECO:0000250}.
SIGNAL 1..24; /evidence="ECO:0000255"
null
PF00160;
IPR029000;IPR020892;IPR002130;IPR044665;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
ppiA rot rotA STM3472
false
Salmonella enterica
1,446
row_183007
false
null
354,475
A9N6H3
MPRANEIKKGMVLNYNGKLLIVKDIDIQSPTARGAATLYKMRFSDVRTGLKVEERFKGDDIVDTVTLSRRGVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEEELLFMPEGGMPDMQVLTWDGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLSTGLVIQVPEYLSAGEKIRIHIEERRYMGRAD
Elongation factor P-like protein
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
190
21,386
null
GO:0003746; GO:0005829; GO:0043043
Inferred from homology
2
null
null
null
PF01132;PF08207;PF09285;
IPR015365;IPR012340;IPR014722;IPR020599;IPR013185;IPR011897;IPR001059;IPR013852;IPR008991;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
yeiP SPAB_00793
false
Salmonella enterica
1,447
row_337519
false
null
409,487
P0A245
MKRLIVGISGASGAIYGVRLLQILRDVDSVETHLVMSQAARQTLALETHFSLREVQALADVTHDARDIAASISSGSYPTAGMVILPCSIKTLSGIVHSYTDGLLTRAADVILKERRPLVLCVRETPLHIGHLRLMTQAAEIGAVIMPPVPAFYHLPQTLDDVINQTVNRVLDQFDIPLPHDLFVRWQGA
Flavin prenyltransferase UbiX (EC 2.5.1.129)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
189
20,691
Flavoprotein;FMN;Prenyltransferase;Reference proteome;Transferase
GO:0006744; GO:0016831; GO:0106141
Inferred from homology
2
null
null
null
PF02441;
IPR036551;IPR003382;IPR004507;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
ubiX STM2356
false
Salmonella enterica
1,448
row_391946
false
null
98,526
Q8Z989
MAKSVPAIFLDRDGTINVDHGYVHEIDAFEFIDGVIDAMRELKKMGYALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSIEEFRQVCDCRKPHPGMLISARDFLHIDMAASYMVGDKLEDMQAAAAANVGTKVLVRTGKPVTAEAENAADWVLNSLADLPSAIKKQQK
D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase (EC 3.1.3.82) (D,D-heptose 1,7-bisphosphate phosphatase) (HBP phosphatase)
Salmonella typhi
90,370
188
20,860
Carbohydrate metabolism;Cytoplasm;Hydrolase;Lipopolysaccharide biosynthesis;Magnesium;Metal-binding;Zinc
GO:0000287; GO:0005737; GO:0008270; GO:0009244; GO:0034200; GO:0097171
Evidence at protein level
4
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
null
null
PF13242;
IPR036412;IPR006549;IPR023214;IPR004446;IPR006543;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
gmhB STY0275 t0251
false
Salmonella enterica
1,449
row_87695
false
null
207,471
P64036
MATYYSNDFRSGLKIMLDGEPYAVESSEFVKPGKGQAFARVKLRRLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGDNAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGAVVKVPLFVQIGEVIKVDTRSGEYVSRVK
Elongation factor P (EF-P)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
188
20,623
Cytoplasm;Elongation factor;Hydroxylation;Protein biosynthesis;Reference proteome
GO:0003746; GO:0005737; GO:0005829; GO:0043043
Evidence at protein level
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00141}.
null
null
PF01132;PF08207;PF09285;
IPR015365;IPR012340;IPR014722;IPR020599;IPR013185;IPR001059;IPR013852;IPR011768;IPR008991;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
efp STM4334
false
Salmonella enterica
1,450
row_193894
false
null
297,967
Q8Z3G5
MSKAGASLATCYGPVSTHVMTKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTSNIEVAIITGRKAKLVEDRCATLGIVHLYQGQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTHIAGGRGAVREVCDLLLLAQGKLDEAKGQSI
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC (EC 3.1.3.45) (KDO 8-P phosphatase)
Salmonella typhi
90,370
188
20,075
Hydrolase;Lipopolysaccharide biosynthesis;Magnesium;Metal-binding
GO:0008781; GO:0009103; GO:0019143; GO:0046872
Evidence at protein level
3
null
null
null
PF08282;
IPR050793;IPR036412;IPR023214;IPR010023;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
kdsC STY3495 t3233
false
Salmonella enterica
1,451
row_281865
false
null
354,246
A9MVT2
MHFTATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGLGILASKFVLEWNHWIAFVLLIFLGGRMIIEGIRGGSDEDETPLRRHSFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMIGRFIGPMLGKRAEILGGVVLIGIGVQILWTHFHG
Probable manganese efflux pump MntP
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
188
20,049
Cell inner membrane;Cell membrane;Ion transport;Manganese;Membrane;Transmembrane;Transmembrane helix;Transport
GO:0005384; GO:0005886
Inferred from homology
2
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_01521}; Multi-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_01521}.
null
TRANSMEM 3..23; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01521"; TRANSMEM 41..61; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01521"; TRANSMEM 66..86; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01521"; TRANSMEM 106..128; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01521"; TRANSMEM 143..163; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01521"; TRANSMEM 168..188; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01521"
PF02659;
IPR003810;IPR022929;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
mntP yebN SPAB_01380
false
Salmonella enterica
1,452
row_337291
false
null
11,701
P0A251
MSLINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLAPSLDLVGKI
Alkyl hydroperoxide reductase C (EC 1.11.1.26) (Alkyl hydroperoxide reductase protein C22) (Peroxiredoxin) (Thioredoxin peroxidase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
187
20,747
3D-structure;Antioxidant;Cytoplasm;Direct protein sequencing;Disulfide bond;Oxidoreductase;Peroxidase;Redox-active center;Reference proteome
GO:0005829; GO:0006979; GO:0008379; GO:0042744; GO:0045454; GO:0102039
Evidence at protein level
5
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:P0AE08}.
null
null
PF10417;PF00578;
IPR017559;IPR000866;IPR050217;IPR024706;IPR019479;IPR036249;IPR013766;
1N8J;1YEP;1YEX;1YF0;1YF1;3EMP;4MA9;4MAB;4XRA;4XRD;4XS1;4XS4;4XS6;4XTS;5UKA;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
ahpC STM0608
false
Salmonella enterica
1,453
row_9911
false
null
179,933
E1W818
MLPDKGWLVEARRVPSPHYDCRPDDEKPSLLVVHNISLPPGEFGGPWIDALFTGTIDPDAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSNYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRTLIASYPAIADNMTGHCNIAPDRKTDPGPAFDWPRFRALVALSSHKEMT
1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD (EC 3.5.1.28) (N-acetylmuramoyl-L-alanine amidase)
Salmonella typhimurium (strain SL1344)
216,597
187
20,913
Cell wall biogenesis/degradation;Cytoplasm;Hydrolase;Metal-binding;Zinc
GO:0005737; GO:0008745; GO:0009253; GO:0009254; GO:0046872; GO:0071555
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:P13016}.
null
null
PF01510;
IPR036505;IPR002502;IPR051206;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
ampD SL1344_0146
false
Salmonella enterica
1,454
row_167129
false
null
189,203
P06193
MILLIDNYDSFTWNLYQYFCELGAEVQVRRNDALTLAHIDALNPQKIVISPGPCTPNDAGISLAVIRHYAGRIPMLGVCLGHQAMAQAFGASVVRAAKVMHGKTSPVTHNGQGVFRGLPSPLTVTRYHSLIVDPATLPECFEITAWSETQEIMGIRHREWDLEGVQFHPESILSEQGHALLKNFLRR
Aminodeoxychorismate synthase component 2 (ADC synthase) (ADCS) (EC 2.6.1.85) (4-amino-4-deoxychorismate synthase component 2) (Aminodeoxychorismate synthase, glutamine amidotransferase component)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
187
20,801
Folate biosynthesis;Glutamine amidotransferase;Reference proteome;Transferase
GO:0000162; GO:0046654; GO:0046656; GO:0046820
Inferred from homology
3
null
null
null
PF00117;
IPR050472;IPR029062;IPR017926;IPR006221;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
pabA STM3469
false
Salmonella enterica
1,455
row_176078
false
null
414,598
P12057
MEISARNSSTKIIAVIILSLTTLVFILGFAVAWLAVTNRALIHEQRTVVTPMTYNAPFVVSETKADTEYFRMMTLSFLALRLNVSPETVDSNHAFLMSFVEPEAREEFKKVLQEEAAQIKANDVNSTFYTTEINVYPVDGRIDVRGVLKMWIGNSRPSTEIKTYRLRLKYTGGFTRIGRFYEVTNEK
Protein TraE
Salmonella typhi
90,370
187
21,331
Conjugation;Plasmid
null
Inferred from homology
2
null
null
null
PF05309;
IPR007973;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
traE
false
Salmonella enterica
1,456
row_396928
false
null
531,528
A9N4P2
MNLQHHFLIAMPALQDPIFRRSVVYICEHNQDGAMGIIINKPLENLQIEGILEKLKITPEPRDSAIRLDKAVMLGGPLAEDRGFILHTPPSRFASSIRISDNTVITTSRDVLETLGTQQQPSDVLVALGYASWDKGQLEQELLDNAWLTAPADLNILFKTPIAERWREAAKLFGIDILTMPGVAGHA
UPF0301 protein YqgE
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
187
20,729
null
GO:0005829
Inferred from homology
1
null
null
null
PF02622;
IPR003774;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
yqgE SPAB_03861
false
Salmonella enterica
1,457
row_511861
false
null
542,717
P40822
MKKFFFAAALVVSGLLVGCNQLTQYTISEQEINQALEKRNNFSKDIGLPGIADAHIVLTNLVSQIGREEPNKVTLTGDARLDMNSLFGSQKATMKLKLKALPVFDKEKGAIYLQEMEVVDATVTPEKMQSVLQTLLPYLNQSLRSYFNQRPAYVLREDSSKGEALAKKLAKGIEVKPGEIVIPFTN
Uncharacterized lipoprotein YceB
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
186
20,620
Cell membrane;Lipoprotein;Membrane;Palmitate;Reference proteome;Signal
GO:0005886
Inferred from homology
1
SUBCELLULAR LOCATION: Cell membrane {ECO:0000255|PROSITE-ProRule:PRU00303}; Lipid-anchor {ECO:0000255|PROSITE-ProRule:PRU00303}.
SIGNAL 1..18; /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
null
PF07273;
IPR010835;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
yceB STM1164
false
Salmonella enterica
1,458
row_522974
false
null
200,430
P37921
MKHKLMTSTIASLMFVAGAAVAADPTPVSVSGGTIHFEGKLVNAACAVSTKSADQTVTLGQYRTASFTAIGNTTAQVPFSIVLNDCDPKVAANAAVAFSGQADNTNPNLLAVSSADNSTTATGVGIEILDNTSSPLKPDGATFSAKQSLVEGTNTLRFTARYKATAAATTPGQANADATFIMKYE
Type-1 fimbrial protein, A chain (Type-1A pilin)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
185
18,869
Direct protein sequencing;Disulfide bond;Fimbrium;Reference proteome;Signal
GO:0009289; GO:0043709
Evidence at protein level
3
SUBCELLULAR LOCATION: Fimbrium.
SIGNAL 1..22; /evidence="ECO:0000269|Ref.3"
null
PF00419;
IPR000259;IPR036937;IPR008966;IPR050263;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
fimA STM0543
false
Salmonella enterica
1,459
row_186984
false
null
296,744
Q8XFE5
MKRNVLLLPLLIFLLIAAALLWQLARNAQGDDPTNLESALTGKPVPAFRLESLETPGQYYQAEVLTQGKPVLLNVWATWCPTCRAEHQYLNRLAAQGIRVVGLNYKDDRAKAVAWLKELGNPYALSLSDSDGMLGLDLGVYGAPETFLIDGRGIIRYRHAGDLNARVWESELKPLWDRYSREAAQ
Thiol:disulfide interchange protein DsbE (Cytochrome c biogenesis protein CcmG)
Salmonella typhi
90,370
185
20,691
Cell inner membrane;Cell membrane;Cytochrome c-type biogenesis;Disulfide bond;Membrane;Redox-active center;Transmembrane;Transmembrane helix
GO:0005886; GO:0015036; GO:0017004; GO:0030288
Inferred from homology
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000250}; Single-pass membrane protein {ECO:0000250}; Periplasmic side {ECO:0000250}.
null
TRANSMEM 5..25; /note="Helical"; /evidence="ECO:0000255"
PF08534;
IPR004799;IPR013740;IPR036249;IPR017937;IPR013766;IPR050553;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
dsbE1 ccmG1 STY2474 t0616; dsbE2 ccmG2 STY3965 t3705
false
Salmonella enterica
1,460
row_280655
false
null
354,108
A9MPI9
MISDIRKDAEVRMEKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDAALADKEAELMQF
Ribosome-recycling factor (RRF) (Ribosome-releasing factor)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
185
20,556
Cytoplasm;Protein biosynthesis;Reference proteome
GO:0002184; GO:0005829; GO:0043023
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00040}.
null
null
PF01765;
IPR002661;IPR023584;IPR036191;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
frr SARI_02783
false
Salmonella enterica
1,461
row_337153
false
null
416,720
P23988
MKNIILSTLVITTSVLVVNVAQADTNAFSVGYAQSKVQDFKNIRGVNVKYRYEDDSPVSFISSLSYLYGDRQASGSVEPEGIHYHDKFEVKYGSLMVGPAYRLSDNFSLYALAGVGTVKATFKEHSTQDGDSFSNKISSRKTGFAWGAGVQMNPLENIVVDVGYEGSNISSTKINGFNVGVGYRF
Virulence membrane protein PagC
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
185
20,184
Cell outer membrane;Membrane;Reference proteome;Signal;Transmembrane;Transmembrane beta strand;Virulence
GO:0009279; GO:0044384
Inferred from homology
2
SUBCELLULAR LOCATION: Cell outer membrane; Multi-pass membrane protein.
SIGNAL 1..23; /evidence="ECO:0000255"
null
PF06316;
IPR051723;IPR000758;IPR011250;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
pagC STM1246
false
Salmonella enterica
1,462
row_398977
false
null
57,970
Q9XDM8
MSQAIGILELTSIAKGMELGDAMLKSANVDLLVSKTICPGKFLLMLGGDIGAIQQAIETGTSQAGEMLVDSLVLANIHPSVLPAISGLNSVDKRQAVGIVETWSVAACISAADRAVKGSNVTLVRVHMAFGIGGKCYMVVAGDVSDVNNAVTVASESAGEKGLLVYRSVIPRPHEAMWRQMVEG
Bacterial microcompartment shell protein PduT (Bacterial microcompartment protein homotrimer) (BMC-T) (Propanediol utilization protein PduT)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
184
19,150
3D-structure;4Fe-4S;Bacterial microcompartment;Iron;Iron-sulfur;Metal-binding;Reference proteome;Transport
GO:0031472; GO:0046872; GO:0051144; GO:0051539
Evidence at protein level
5
SUBCELLULAR LOCATION: Bacterial microcompartment {ECO:0000269|PubMed:12923081}.
null
null
PF00936;
IPR000249;IPR050575;IPR037233;IPR044872;IPR011238;
3N79;3VCD;4DDF;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
pduT STM2054
false
Salmonella enterica
1,463
row_50176
false
null
353,884
A9MGI9
MGKLIWLMGPSGSGKDSLLAELRQQEHEQLLIAHRYITRAANAGNENHIALSQQEFFIRAKQNLLALSWYANGFYYGLGIEIDLWLHAGFDVVVNGSRAHLSQAQARYGTSLLPVCLTVSPDILRQRLQTRGRENDAEIAARLERAAHYPPFNCHTVNNDGSLLQSVERLLILMGRKEEHYASL
Ribose 1,5-bisphosphate phosphokinase PhnN (EC 2.7.4.23) (Ribose 1,5-bisphosphokinase)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
184
20,708
ATP-binding;Nucleotide-binding;Reference proteome;Transferase
GO:0005524; GO:0006015; GO:0019634; GO:0033863
Inferred from homology
2
null
null
null
PF13238;
IPR008145;IPR027417;IPR012699;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
phnN SARI_03381
false
Salmonella enterica
1,464
row_336931
false
null
425,984
P65559
MVEQRRLASTEWVDIVNEDNEVIAQSSREQMRAQRLRHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGLFYFEDQHCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKALALWMTRNAKNEAALQEKPEETE
Uncharacterized Nudix hydrolase YfcD (EC 3.6.-.-)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
184
20,906
Hydrolase;Magnesium;Metal-binding;Reference proteome
GO:0016817; GO:0046872
Inferred from homology
2
null
null
null
PF00293;
IPR015797;IPR000086;IPR024195;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
yfcD STM2346
false
Salmonella enterica
1,465
row_408078
false
null
17,028
P26394
MMIVIKTAIPDVLILEPKVFGDERGFFFESYNQQTFEELIGRKVTFVQDNHSKSKKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYAEFLYKATNYYSPSSEGSILWNDEAIGIEWPFSQLPELSAKDAAAPLLDQALLTE
dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) (dTDP-4-keto-6-deoxyglucose 3,5-epimerase) (dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase) (dTDP-L-rhamnose synthase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
183
20,663
3D-structure;Carbohydrate metabolism;Isomerase;Lipopolysaccharide biosynthesis;Reference proteome
GO:0000271; GO:0005829; GO:0008830; GO:0009103; GO:0009243; GO:0019305
Evidence at protein level
5
null
null
null
PF00908;
IPR000888;IPR014710;IPR011051;
1DZR;1DZT;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
rfbC rmlC STM2094
false
Salmonella enterica
1,466
row_14610
false
null
140,642
A9MT18
MPQPAKVLLLYAHPESQDSVANRVLLKPAIQHNNVTVHDLYARYPDFFIDTPYEQALLREHDVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLVGKYWRSVITTGEPESAYRYDALNRYPMSDVLRPFELTAAMCRMHWMPPIIVYWARRQSPQTLASHAKAYGEWLANPVSAGGY
Glutathione-regulated potassium-efflux system ancillary protein KefG (Putative quinone oxidoreductase KefG) (EC 1.6.5.2)
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
183
20,937
Cell inner membrane;Cell membrane;Membrane;NAD;Oxidoreductase
GO:0005886; GO:0006813; GO:0008753; GO:0009055; GO:0010181; GO:0050136; GO:1901381
Inferred from homology
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_01415}; Peripheral membrane protein {ECO:0000255|HAMAP-Rule:MF_01415}; Cytoplasmic side {ECO:0000255|HAMAP-Rule:MF_01415}.
null
null
PF02525;
IPR003680;IPR029039;IPR023947;IPR046980;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
kefG SPAB_04301
false
Salmonella enterica
1,467
row_128522
false
null
353,849
A9MEY0
MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGAELVDLGRNALDKIPLDADLRDAIELAQRIKMEGRRRQLQLIGKMLRQRDVDPIRQALDKLKNRHNQQVVLFHKLEHLRDRLIVEGDDAVAEILNLWPNADRQQLRSLIRNAKKEKEGNKPPKSARQIFQYLRELAENEG
Dual-action ribosomal maturation protein DarP (Large ribosomal subunit assembly factor DarP)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
183
21,410
Cytoplasm;Reference proteome;Ribosome biogenesis;RNA-binding;rRNA-binding
GO:0005829; GO:0019843; GO:0043022; GO:1902626
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00765}. Note=Associates with late stage pre-50S ribosomal subunits. {ECO:0000255|HAMAP-Rule:MF_00765}.
null
null
PF04751;
IPR006839;IPR023153;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
darP SARI_03210
false
Salmonella enterica
1,468
row_336896
false
null
353,888
A9MGT6
MMGKQLTAQVPAEPVVLGKMGSSYGIRGWLRVFSSTEDAESIFDYQPWFIQKADQWQQVQLESWKHHNQDLIIKLKGVDDRDAANLLTNCEIVVDSSQLPALEEGDYYWKDLMGCQVVTAEGYDLGKVIDMMETGSNDVLVIKANLKDAFGIKERLVPFLDGQVIKKVDLATRTIEVDWDPGF
Ribosome maturation factor RimM
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
183
20,658
Chaperone;Cytoplasm;Reference proteome;Ribosome biogenesis;rRNA processing
GO:0005737; GO:0005840; GO:0006364; GO:0042274; GO:0043022
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00014}.
null
null
PF24986;PF01782;
IPR011033;IPR056792;IPR011961;IPR002676;IPR036976;IPR009000;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
rimM SARI_00251
false
Salmonella enterica
1,469
row_336935
false
null
353,955
A9MJ39
MKKKASLSEEDQTLFRQLMVGTRQIKQDTIVHRPQRKKITEVPTRRLIQEQADASHYFSDEFQPLLNTEGPVKYVREDVSHFELKKMRRGDYSPELFLDLHGLTQLQAKQELGALITACRREHIFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEWQPPELP
Ribosome rescue factor SmrB (EC 3.1.-.-)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
183
21,222
Endonuclease;Hydrolase;Nuclease;Reference proteome;RNA-binding;rRNA-binding
GO:0004521; GO:0019843; GO:0072344
Inferred from homology
2
null
null
null
PF01713;
IPR002625;IPR036063;IPR022990;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
smrB SARI_00513
false
Salmonella enterica
1,470
row_337002
false
null
354,020
A9MLY9
MTATAQQLEFLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYTLSIELLVERYKKAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRLEKQGITCYSLVPFPGH
Adenine phosphoribosyltransferase (APRT) (EC 2.4.2.7)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
183
20,029
Cytoplasm;Glycosyltransferase;Purine salvage;Reference proteome;Transferase
GO:0003999; GO:0005829; GO:0006166; GO:0006168; GO:0044209
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00004}.
null
null
PF00156;
IPR005764;IPR050120;IPR000836;IPR029057;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
apt SARI_02450
false
Salmonella enterica
1,471
row_337065
false
null
409,467
P0A210
MTVQQPKRRPLSRYLKDFKHSQTHCAHCHKLLDRITLVRRGKIVNKIAISQLDMLLDDAAWQREQKEWVALCRFCGDLHCKKQSDFFDIIGFKQYLFEQTEMSHGTVREYVVRLRRLGNYLSEQNISHDLLQDGFLDESLAPWLPETSTNNYRIALRKYQQYKAHQQIAPRQKSPFTASSDIY
Protein FliZ
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
183
21,688
Reference proteome
GO:0003677; GO:0015074
Predicted
2
null
null
null
PF02899;
IPR022523;IPR004107;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
fliZ STM1955
false
Salmonella enterica
1,472
row_391926
false
null
140,629
A9MRI5
MTEEHVVLLDEQDKPSGTLEKYAAHTLNTPLHLAFSCWLFNEDGQLLVTRRSLSKKAWPGVWTNSVCGHPQQGEAIEEAIIRRCRFELGVEITDLTPIYPHFSYRAIDPNGIVENEVCPVFAARATSVLQVNNEEVMDCQWSVLEDVLRGISATPWAFSPWMVMQASDDNARELLSEFANGN
Isopentenyl-diphosphate Delta-isomerase (IPP isomerase) (EC 5.3.3.2) (IPP:DMAPP isomerase) (Isopentenyl pyrophosphate isomerase)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
182
20,491
Cytoplasm;Isomerase;Isoprene biosynthesis;Magnesium;Manganese;Metal-binding;Reference proteome
GO:0004452; GO:0005737; GO:0008299; GO:0046872; GO:0050992
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00202}.
null
null
PF00293;
IPR056375;IPR011876;IPR015797;IPR000086;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
idi SARI_04611
false
Salmonella enterica
1,473
row_128509
false
null
253,719
Q57N57
MQFNIPTLLTLFRVILIPFLVVVFYLPFAWAPMVSALIFCIAAITDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIAREIIISALREWMAELGKRSSVAVSWIGKVKTTAQMVALAWLLWRPNIWVEYAGIALFFVAAVLTLWSMLQYLSAARGDLLDQ
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) (Phosphatidylglycerophosphate synthase) (PGP synthase)
Salmonella choleraesuis (strain SC-B67)
321,314
182
20,697
Cell inner membrane;Cell membrane;Lipid biosynthesis;Lipid metabolism;Membrane;Phospholipid biosynthesis;Phospholipid metabolism;Transferase;Transmembrane;Transmembrane helix
GO:0005886; GO:0006655; GO:0008444
Inferred from homology
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_01437}; Multi-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_01437}.
null
TRANSMEM 13..37; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01437"; TRANSMEM 61..81; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01437"; TRANSMEM 87..107; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01437"; TRANSMEM 146..168; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_01437"
PF01066;
IPR050324;IPR000462;IPR043130;IPR048254;IPR023762;IPR004570;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella enterica subsp. enterica serovar Choleraesuis (no rank)
pgsA SCH_1948
false
Salmonella enterica
1,474
row_238808
false
null
423,395
P57048
MFDIGFSELLLVFVIGLIVLGPQRLPVAVKTVAGWIRALRSLATTVQNELTQELKLQEFQDSLKKVEKASLENLTPELKASMDELRQAAESMKRTYSANDPEQASDEAHTIHNPVVKGNETQHEGVTPAAAETQASAPEQKPEPVKANVPESTETASVATIDAEKKSAAPVVESSPSSSDKP
Sec-independent protein translocase protein TatB
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
182
19,601
Cell inner membrane;Cell membrane;Membrane;Protein transport;Reference proteome;Translocation;Transmembrane;Transmembrane helix;Transport
GO:0008320; GO:0033281; GO:0043953
Inferred from homology
2
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_00237}; Single-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_00237}.
null
TRANSMEM 1..21; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00237"
null
IPR018448;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
tatB STM3974 STMD1.15
false
Salmonella enterica
1,475
row_405521
false
null
28,187
Q05599
MMILVTGGARSGKSRHAEALIGDAPQVLYIATSQILDDEMAARIQHHKDGRPAHWRTAECWRHLDTLITADLAPDDAILLECITTMVTNLLFALGGENDPEQWDYAAMERAIDDEIQILIAACQRCPAKVVLVTNEVGMGIVPENRLARHFRDIAGRVNQRLAAAADEVWLVVSGIGVKIK
Bifunctional adenosylcobalamin biosynthesis protein CobU (Adenosylcobinamide kinase) (EC 2.7.1.156) (Adenosylcobinamide-phosphate guanylyltransferase) (EC 2.7.7.62)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
181
19,902
3D-structure;ATP-binding;Cobalamin biosynthesis;Direct protein sequencing;GTP-binding;Kinase;Nucleotide-binding;Reference proteome;Transferase
GO:0005524; GO:0005525; GO:0008820; GO:0009236; GO:0043752
Evidence at protein level
5
null
null
null
PF02283;
IPR003203;IPR027417;
1C9K;1CBU;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
cobU STM2018
false
Salmonella enterica
1,476
row_24633
false
null
59,628
A0A0F6B506
MMRFVYIYILVIYGSYLWFSLGGNMFTINSTNRVASTIAPYACVSDVNLEDKATFLDEHTSIHANDSSLQCFVLNDQHVPQNTLATDVEGYNRGLQERISLEYQPLESIVFLLGTPAVLETKESLSLPVSPDALTQKLLSISSNDECKLSGSTSCTTPASHNPPSGYIAQYRHSAEVFPDE
Salmonella anti-inflammatory response activator (SarA) (Salmonella translocated effector E)
Salmonella typhimurium (strain 14028s / SGSC 2262)
588,858
181
20,006
Host cytoplasm;Membrane;Transmembrane;Transmembrane helix;Virulence
GO:0016020; GO:0030430
Evidence at protein level
4
SUBCELLULAR LOCATION: Membrane {ECO:0000255}; Single-pass membrane protein {ECO:0000255}. Host cytoplasm {ECO:0000269|PubMed:20974834, ECO:0000269|PubMed:29924996}. Note=Secreted mainly by the SPI-2 type III secretion system (T3SS), with a minor contribution from the SPI-1 T3SS. {ECO:0000269|PubMed:20974834, ECO:0000269|PubMed:29924996}.
null
TRANSMEM 4..24; /note="Helical"; /evidence="ECO:0000255"
null
null
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank), Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (strain)
sarA gogC pagJ steE stm2585 STM14_3166
false
Salmonella enterica
1,477
row_51580
false
null
99,116
Q93LJ4
MIRHIAIFLCSLLMCSTTFADSVTSVSLGALLTALNERMLLMKDVAAYKMKHHLPIEDFTREQNVFAEAEEEAKNNGLDPHSITPFIRSLMDASKAIQYRYLAQWRTGSEPSFPIQTLSVTRQRIRQLDNQMLIIISQRLMVGAFSHDDMVWLRAQFNAPNLNESDISNVLAALSLVRRAR
Monofunctional chorismate mutase (EC 5.4.99.5)
Salmonella typhimurium
90,371
181
20,582
Direct protein sequencing;Isomerase;Periplasm;Signal
GO:0004106; GO:0009697; GO:0042597; GO:0046417
Evidence at protein level
4
SUBCELLULAR LOCATION: Periplasm {ECO:0000269|PubMed:11532214}.
SIGNAL 1..20; /evidence="ECO:0000269|PubMed:11532214"
null
PF01817;
IPR036263;IPR051331;IPR008240;IPR036979;IPR002701;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
aroQ
false
Salmonella enterica
1,478
row_88236
false
null
140,704
A9MX50
MMQPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHVQMSVADIVEKEGWGGFRARETAALEAVSAPSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVNRLEAEPEADLRPTLTGKPLSEEVREVLEQRDALYRETAHYIIDATKAPAQVVSEIIAALPPSTQRLQGDVYT
Shikimate kinase 2 (SK 2) (EC 2.7.1.71)
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
181
19,804
Amino-acid biosynthesis;Aromatic amino acid biosynthesis;ATP-binding;Cytoplasm;Kinase;Magnesium;Metal-binding;Nucleotide-binding;Transferase
GO:0000287; GO:0004765; GO:0005524; GO:0005829; GO:0008652; GO:0009073; GO:0009423
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01269}.
null
null
PF01202;
IPR027417;IPR031322;IPR000623;IPR027544;IPR023000;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
aroL SPAB_03202
false
Salmonella enterica
1,479
row_128584
false
null
140,843
A9N3L5
MTEEHVVLLDEQDKPSGTLEKYAAHTLNTPLHLAFSCWLFNEDGQLLVTRRSLSKKAWPGVWTNSVCGHPQQDETTEEAIIRRCRFELGVEITDLTPVYPHFSYRATDPNGIVENEVCPVFAARATSVLQVNSEEVMDYQWSEFKSVWKSLLATPWAFSPWMVMQASDEQARERLLDYCQR
Isopentenyl-diphosphate Delta-isomerase (IPP isomerase) (EC 5.3.3.2) (IPP:DMAPP isomerase) (Isopentenyl pyrophosphate isomerase)
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
181
20,840
Cytoplasm;Isomerase;Isoprene biosynthesis;Magnesium;Manganese;Metal-binding
GO:0004452; GO:0005737; GO:0008299; GO:0046872; GO:0050992
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00202}.
null
null
PF00293;
IPR056375;IPR011876;IPR015797;IPR000086;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
idi SPAB_03786
false
Salmonella enterica
1,480
row_128722
false
null
307,900
Q9L6L1
MKTLILFSTRDGQTREIASYLASELKDMGIWADVVNLHRAEEPDWDSYDRVVIGASIRYGHYHSAFQEFVKKYATRLNGMPSAFYSVNLVARKAEKRTPQTNSYARKFLMSSPWRPDYCAVIAGALRYPRYRWYDRLMIKLIMKMSGGETDTSKEVVYTDWEQVAHFAREIAHLTNKSSAK
Protoporphyrinogen IX dehydrogenase [quinone] (EC 1.3.5.3) (Protoporphyrinogen IX dehydrogenase [menaquinone]) (Protoporphyrinogen IX dehydrogenase [ubiquinone]) (Protoporphyrinogen oxidase) (PPO)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
181
21,006
Cell inner membrane;Cell membrane;Flavoprotein;FMN;Membrane;Nucleotide-binding;Oxidoreductase;Porphyrin biosynthesis;Reference proteome
GO:0004729; GO:0005886; GO:0006782; GO:0006783; GO:0009055; GO:0010181; GO:0070819
Inferred from homology
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_00853}; Peripheral membrane protein {ECO:0000255|HAMAP-Rule:MF_00853}.
null
null
PF12724;
IPR008254;IPR001226;IPR026816;IPR029039;IPR044264;IPR052200;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
hemG STM3987 STMD1.2
false
Salmonella enterica
1,481
row_291577
false
null
410,495
P0AA02
MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEELFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEKA
Transcription termination/antitermination protein NusG
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
181
20,546
Reference proteome;Transcription;Transcription antitermination;Transcription regulation;Transcription termination
GO:0005829; GO:0006353; GO:0031564; GO:0032784; GO:0140673
Inferred from homology
2
null
null
null
PF00467;PF02357;
IPR005824;IPR047050;IPR006645;IPR036735;IPR043425;IPR014722;IPR001062;IPR015869;IPR008991;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
nusG STM4148 STMF1.7
false
Salmonella enterica
1,482
row_392951
false
null
426,002
P65599
MSADENNLIWIDLEMTGLDPERDRIIEIATLVTDASLNILAEGPTIAVHQSDAQLALMDDWNVRTHTGSGLVDRVKASTMGERDAELATIEFLKTWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILAGFTKQGTHQAMDDIRESVAELAYYREHFIKL
Oligoribonuclease (EC 3.1.15.-)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
181
20,632
Cytoplasm;Exonuclease;Hydrolase;Nuclease;Reference proteome
GO:0000175; GO:0003676; GO:0005737; GO:0006259
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00045}.
null
null
PF00929;
IPR013520;IPR022894;IPR012337;IPR036397;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
orn STM4350
false
Salmonella enterica
1,483
row_408096
false
null
531,503
A9MSB6
MDELTAQALKAFTRRYCGAWQEKHGSWPLSEELYGVPSPCIISSTRDAVYWQPQPFEGEENVNAVERAFDIVVQPALHAFYTTQFAGDMPAQFADEKLTLLQTWSQDDFRRVQENLIGHLVTQKRLRLSPTLFIATQENELEVISICNLSGEVIKETLGTRHRIVLAATLAEFLTQLNPLL
Protein Syd
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
181
20,550
Cell inner membrane;Cell membrane;Membrane;Reference proteome
GO:0009898
Inferred from homology
1
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_01104}; Peripheral membrane protein {ECO:0000255|HAMAP-Rule:MF_01104}; Cytoplasmic side {ECO:0000255|HAMAP-Rule:MF_01104}. Note=Loosely associated with the cytoplasmic side of the inner membrane, probably via SecY. {ECO:0000255|HAMAP-Rule:MF_01104}.
null
null
PF07348;
IPR009948;IPR038228;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
syd SARI_04696
false
Salmonella enterica
1,484
row_511836
false
null
539,413
P0A1S6
MALKATIYKAVVNVADLDRNRFLDAALTLARHPSETQERMMLRLLAWIKYADERLQFTRGLSAEDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQASDVALFAYNSRAAQIWWQQHQSKCAQFANLSVWYLDDGQLAQLSEFADRTMTLQATIQDGAIWLSDARNNLEIQLTAWQQPS
Uncharacterized protein YaeQ
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
181
20,836
Reference proteome
null
Predicted
1
null
null
null
PF07152;
IPR011335;IPR009822;IPR038590;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
yaeQ STM0239
false
Salmonella enterica
1,485
row_519702
false
null
253,689
Q57M35
MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFELGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP
NADH-quinone oxidoreductase subunit I (EC 7.1.1.-) (NADH dehydrogenase I subunit I) (NDH-1 subunit I)
Salmonella choleraesuis (strain SC-B67)
321,314
180
20,520
4Fe-4S;Cell inner membrane;Cell membrane;Iron;Iron-sulfur;Membrane;Metal-binding;NAD;Quinone;Repeat;Translocase;Ubiquinone
GO:0005506; GO:0005886; GO:0009060; GO:0048038; GO:0050136; GO:0051539
Inferred from homology
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_01351}; Peripheral membrane protein {ECO:0000255|HAMAP-Rule:MF_01351}.
null
null
PF12838;
IPR017896;IPR017900;IPR010226;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella enterica subsp. enterica serovar Choleraesuis (no rank)
nuoI SCH_2321
false
Salmonella enterica
1,486
row_238778
false
null
418,321
P33321
MKGGKRVQTARPNRINSEIRAQEVRLTGLEGEQLGIVSLREALEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFPTKIEGRQMIMVLAPKKKQ
Translation initiation factor IF-3
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
180
20,594
Cytoplasm;Initiation factor;Protein biosynthesis;Reference proteome
GO:0003743; GO:0005829; GO:0032790; GO:0043022
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00080}.
null
null
PF00707;PF05198;
IPR036788;IPR036787;IPR019813;IPR001288;IPR019815;IPR019814;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
infC STM1334
false
Salmonella enterica
1,487
row_400549
false
null
495,870
Q7CQY1
MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSATTQPTASAVKGTPAAQPVAEAKPVNPVKDKVRAMRELLLSDEYAEQKKAVNRFMLILTTLYSLDHHAFAEATESLHGRTRVYFAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMIEHIMQSMQFPAELIEKVCGTI
Negative modulator of initiation of replication
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
180
20,149
Cytoplasm;DNA replication inhibitor;DNA-binding;Reference proteome
GO:0005737; GO:0006355; GO:0032297; GO:0043565
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00908}.
null
null
PF03925;PF17206;
IPR013321;IPR010985;IPR005621;IPR026577;IPR036835;IPR033761;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
seqA STM0697
false
Salmonella enterica
1,488
row_476652
false
null
514,704
Q8ZQ75
MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFSRKMLTPDAFCPTGFCVDDAALYFSFEEKCRDFELTKEQRAELVLNALVAIRYLKPQMPKSWHFVAHGEMWTPGTGDAASVWLSDTAEQVNLLVVEPGENAALCLLAQPGVVIAGRTMQLGDAIKIMNDRLKPQVHCHSFSLEQAV
Cell division protein ZapC
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
180
20,585
Cell cycle;Cell division;Cytoplasm;Reference proteome;Septation
GO:0000917; GO:0005737; GO:0043093
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00906}.
null
null
PF07126;PF21083;
IPR009809;IPR048372;IPR048373;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
zapC STM1059
false
Salmonella enterica
1,489
row_495231
false
null
531,469
A9MGA5
MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLVSYSTRHPKHDMQHLLKEVDKMLQLNVDDRPLICGVGLGGYWAERIGFLCDIRQVVFNPNLFPYENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVILSRHDEALDSQRSAEALHPYYEIVWDEEQTHKFKNISPHLQRIKAFKTLG
UPF0227 protein YcfP
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
180
21,080
Reference proteome
null
Inferred from homology
1
null
null
null
PF05728;
IPR029058;IPR022987;IPR008886;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
ycfP SARI_01781
false
Salmonella enterica
1,490
row_511802
false
null
156,893
B4T2X8
MTSRLQVIQGDITQLSVDAIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQGECQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANHFRSIAFPAISTGVYGYPRAQAAEIAVRTVSDFITRYALPEQVYFVCYDEETARLYARLLTQQGDDPA
O-acetyl-ADP-ribose deacetylase (EC 3.1.1.106) (Regulator of RNase III activity)
Salmonella newport (strain SL254)
423,368
179
19,210
Hydrolase
GO:0001883; GO:0008428; GO:0042278; GO:0061463
Inferred from homology
3
null
null
null
PF01661;
IPR002589;IPR043472;IPR024900;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella newport (no rank)
ymdB SNSL254_A1243
false
Salmonella enterica
1,491
row_144411
false
null
354,056
A9MN60
MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLTAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFRK
Large ribosomal subunit protein uL5 (50S ribosomal protein L5)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
179
20,332
Reference proteome;Ribonucleoprotein;Ribosomal protein;RNA-binding;rRNA-binding;tRNA-binding
GO:0000049; GO:0003735; GO:0005840; GO:0006412; GO:0019843; GO:1990904
Inferred from homology
2
null
null
null
PF00281;PF00673;
IPR002132;IPR020930;IPR031309;IPR020929;IPR022803;IPR031310;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
rplE SARI_04201
false
Salmonella enterica
1,492
row_337101
false
null
354,101
A9MPE0
MKQFLDFLPLVVFFAFYKLYDIYAATSALIVATAIVLIYSWVRYRKIEKMALITFVLVAVFGGLTLFFHNDEFIKWKVTVIYALFAGALLMSQWVMKKPLIQRMLGKELALPQQIWSKLNLAWALFFIVCGLANIYIAFWLPQNIWVNFKVFGLTALTLIFTLLSGVYIYRHLPQEDKS
Inner membrane-spanning protein YciB
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
179
20,823
Cell inner membrane;Cell membrane;Membrane;Reference proteome;Transmembrane;Transmembrane helix
GO:0005886
Inferred from homology
2
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_00189}; Multi-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_00189}.
null
TRANSMEM 22..42; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00189"; TRANSMEM 50..70; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00189"; TRANSMEM 76..96; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00189"; TRANSMEM 121..141; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00189"; TRANSMEM 149..169; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00189"
PF04279;
IPR006008;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
yciB SARI_01219
false
Salmonella enterica
1,493
row_337146
false
null
354,167
A9MRX5
MSSRILTSDVIGIDALLHDHHAVLAKSTGGAVAVFANNAPAFYAVTPARMAELLALEEKLSHPGSDVALDAQFYEEPETAHVAIPCGKFAMYPAWQPDADFQRQAALWGVALRDPVTAEELAAFIAYWQAEGKVFHHIQWQQKLARSVQISRSSNGGMPQRDINSVSEPDNHIPPGFRG
Replication restart protein DnaT
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
179
19,515
DNA replication;DNA-binding;Primosome;Reference proteome
GO:0006269; GO:1990077
Inferred from homology
2
null
null
null
PF17948;
IPR020917;IPR040480;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
dnaT SARI_03036
false
Salmonella enterica
1,494
row_337212
false
null
422,401
P52617
MECIAVNDISYGREAEIWPRDYSMLARRVQFLRFNDILVRLVSNNARIITGYIAKFNPRENLILASDKPKGNKRIEVKLESLAILEELSGNDAFNLSLVPADEFNLQQYTPSRRDYFSICNKCYKQGVGIKIYMKYGQVLTGKTTGVNACQVGVRTSNGNHMQVMFDWVSRITSSDYAE
Repressor of phase 1 flagellin gene
Salmonella abortus-equi
607
179
20,420
DNA-binding;Repressor;Transcription;Transcription regulation
GO:0003677; GO:0003700
Predicted
2
null
null
null
PF03614;
IPR003223;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
fljA
false
Salmonella enterica
1,495
row_404535
false
null
542,666
P40196
MPGVLLWFFKGVIALLLAFAVGLIVYYYLEIRPIAQTALQSASFWLSESPQTRFLRRAAAKIHPKSYTARLLYTQAGVDGHFRIAIWVFWLDSLYRDDELYAMMLAQAYYGRDSQGNAVYGTKNAALTLFHVPVTEMACQQQVQLIYMFKAPSLYRPGSARLVESSKHYMTLCQEQIQQ
Uncharacterized protein YfeL
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
179
20,505
Reference proteome
null
Predicted
1
null
null
null
PF00912;
IPR001264;IPR023346;IPR036950;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
yfeL STM2439
false
Salmonella enterica
1,496
row_522923
false
null
547,597
Q04971
MRFHHFWPPNDIYFGVGAAGIIEEVSLITNDRNYLFVNLNRYSLLNALNFFTRMSDINKIIVIISSSRLMPLARFWLTECKNVIAVFDAATSVQDIIRNVSQHQSGEKILTEQRDYRFRINRKDIVKMKYFLSESGMEELQDRFMNSSSTMYRWRKELAVKFGVREPRYLLLPDSVTLL
Vi polysaccharide biosynthesis protein TviA
Salmonella typhi
90,370
179
21,113
null
GO:0006355; GO:0045227
Predicted
1
null
null
null
null
IPR017032;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
tviA STY4662 t4353
false
Salmonella enterica
1,497
row_527681
false
null
68,707
O33799
MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSEMVLVGLLRGSFMFMADLCREVQVPHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILGLREPKSLAICTLLDKPSRREVDVPVEFVGFSIPDEFVVGYGIDYAQRYRHLPYVGKVVLLDE
Hypoxanthine phosphoribosyltransferase (HPRT) (EC 2.4.2.8)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
178
20,068
3D-structure;Cytoplasm;Glycosyltransferase;Magnesium;Metal-binding;Nucleotide-binding;Purine salvage;Reference proteome;Transferase
GO:0000166; GO:0000287; GO:0004422; GO:0005829; GO:0006166; GO:0006178; GO:0032263; GO:0032264; GO:0046100; GO:0052657
Evidence at protein level
4
SUBCELLULAR LOCATION: Cytoplasm.
null
null
PF00156;
IPR050408;IPR005904;IPR000836;IPR029057;
1J7J;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
hpt STM0170
false
Salmonella enterica
1,498
row_59735
false
null
420,251
P43660
MEFLMKKVVFALSALAVVSTSAFAAESGDGTIKFTGEIVDAPCVVSTDSQNQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGDTDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLYYTANYVATKDTVTTGYGNAEVDFNLSYE
Long polar fimbria protein A
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
178
18,683
Fimbrium;Reference proteome;Signal
GO:0009289; GO:0043709
Inferred from homology
2
SUBCELLULAR LOCATION: Fimbrium {ECO:0000305}.
SIGNAL 1..24; /evidence="ECO:0000255"
null
PF00419;
IPR000259;IPR036937;IPR008966;IPR050263;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
lpfA STM3640
false
Salmonella enterica
1,499
row_402404
false
null