Datasets:
manufernandezbur
/
tox_nontox_clustered_2025

Dataset card Data Studio Files
xet
Community
1
Unnamed: 0
int64
2
562k
Entry
stringlengths
6
10
Sequence
stringlengths
11
999
Protein names
stringlengths
5
558
Organism
stringclasses
392 values
Organism (ID)
int64
595
2.89M
Length
int64
11
999
Mass
int64
1.06k
118k
Keywords
stringlengths
4
380
⌀
Gene Ontology IDs
stringlengths
10
754
⌀
Protein existence
stringclasses
5 values
Annotation
float64
1
5
Subcellular location [CC]
stringlengths
30
2.26k
⌀
Signal peptide
stringclasses
677 values
Transmembrane
stringlengths
32
2.52k
⌀
Pfam
stringlengths
8
72
⌀
InterPro
stringlengths
10
180
⌀
PDB
stringlengths
5
2.65k
⌀
Taxonomic lineage
stringclasses
178 values
Gene Names
stringlengths
2
299
⌀
Toxin
bool
2 classes
species
stringclasses
111 values
cdhit_cluster
int64
0
4.65k
cdhit_rep
stringlengths
5
10
cdhit_rep_is_ref
bool
1 class
cdhit_pct_id
float64
298,173
Q8Z9D2
MSKPTTIAVLQKCKQEKKRFATITAYDYSFAKLFADEGINVMLVGDSLGMTIQGHDSTLPVTVEDIAYHTRAVRRGAPNCLLLSDLPFMAYATPEQAFENAAIVMRAGANMVKIEGGAWLVDTVKMLTERAVPVCGHLGLTPQSVNIFGGYKIQGRGDAGQILLDDALALEAAGAQLLVLECVPVELAKRVTEALSIPVIGIGAGNVTDGQILVMHDAFGITGGHIPKFAKNFLAEAGDMRAAVRQYMAEVESGVYPGEEHSFH
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase) (KPHMT)
Salmonella typhi
90,370
264
28,249
Cytoplasm;Magnesium;Metal-binding;Pantothenate biosynthesis;Transferase
GO:0000287; GO:0003864; GO:0005737; GO:0015940
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00156}.
null
null
PF02548;
IPR003700;IPR015813;IPR040442;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
panB STY0200 t0183
false
Salmonella enterica
1,100
row_282068
false
null
420,131
P43109
MNILKNNSYYFMKLITVCELIILLMSRDIKTRYNGNLLNYMMVLAVPLVWISITVISFQYLNRSVPISTDDISFVIAGILPYLLFRYTITATMRTHSFSTSLAVVSQVKKRHVIFSLAAIEFVNAVIIYIIISLINFLIFSRWEAQKPFLIFEGMVIAWLLGLSFGYFCDALSERFPLVYKAVPVMLRPMFLISAVFYTANELPYSLLSIFSWNPLLHANEIVREGMFEGYHSLYLEPFYPLAFSATLFLAGLIFHLICDTENH
Vi polysaccharide export inner-membrane protein VexB
Salmonella typhi
90,370
264
30,429
Cell inner membrane;Cell membrane;Membrane;Polysaccharide transport;Sugar transport;Transmembrane;Transmembrane helix;Transport
GO:0015774; GO:0015920; GO:0043190; GO:0140359
Inferred from homology
2
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
null
TRANSMEM 38..58; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 65..85; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 120..140; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 149..169; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 176..198; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 239..259; /note="Helical"; /evidence="ECO:0000255"
PF01061;
IPR013525;IPR000412;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
vexB STY4654 t4347
false
Salmonella enterica
1,101
row_402287
false
null
140,416
A9MH59
MKNAFKDALKAGRPQIGLWLGLANSYSAELVAGAGFDWLLIDGEHAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGAQTLLVPMVQNADEARDAVAATRYPPAGIRGVGSALARASRWNRIPDYLHEANDAMCVLVQIETREAMSNLASILDVDGIDGVFIGPADLSADMGFAGNPQHPAVQAAIENAIVQIRAAGKAPGILMANEALAKRYLELGALFVAVGVDTTLLARGAEALAARFGAEKKLSGASGVY
4-hydroxy-2-oxo-heptane-1,7-dioate aldolase (EC 4.1.2.52) (2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase) (HHED aldolase) (4-hydroxy-2-ketoheptane-1,7-dioate aldolase) (HKHD aldolase)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
263
27,703
Aromatic hydrocarbons catabolism;Lyase;Metal-binding;Reference proteome
GO:0005737; GO:0010124; GO:0043863; GO:0046872; GO:1901023
Inferred from homology
3
null
null
null
PF03328;
IPR005000;IPR023701;IPR012689;IPR050251;IPR015813;IPR040442;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
hpcH hpaI SARI_01895
false
Salmonella enterica
1,102
row_128300
false
null
140,497
A9MJM8
MPEGPEIRRAADHLEAAIKGKLLTDVWFAFAQLKPYESQLTGQMVTRIETRGKALLTHFSNGLTLYSHNQLYGVWRVIDTGEIPHTTRILRVRLQTADKTILLYSASDIEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFLAGLGNYLRVEILWQSELTGQHKAKDLSEAQLNTLSHALLDIPRLSYATRGQTDENKHHGAQFRFKVFHRDGEACERCGGIIEKTTLSSRPFYWCPHCQK
Endonuclease 8 (DNA glycosylase/AP lyase Nei) (EC 3.2.2.-, EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site) lyase Nei) (Endonuclease VIII)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
263
29,977
DNA damage;DNA repair;DNA-binding;Glycosidase;Hydrolase;Lyase;Metal-binding;Multifunctional enzyme;Reference proteome;Zinc;Zinc-finger
GO:0000703; GO:0003684; GO:0006284; GO:0008270; GO:0140078
Inferred from homology
3
null
null
null
PF01149;PF06831;PF06827;
IPR015886;IPR015887;IPR044091;IPR023713;IPR012319;IPR035937;IPR010979;IPR000214;IPR010663;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
nei SARI_02219
false
Salmonella enterica
1,103
row_128378
false
null
354,086
A9MNY5
MDVMNAFDSQAEDSPLTIGHSLRRRPLARKKLSEMVEEELEQMIRRHEFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADTIISELSGMAKDFLTHPGGIAHFEQLRLFFESSLVRYAAEHATDEQIALLTKALEINSQSLDDNALFIRSDVEFHRVLAEIPGNPIFMAIHVALLDWLIAARPSVPDRELHEHNNVSYQQHIVIVDAIRQRDPDKADRALQTHLNSVSATWHAFGKKSQKTR
HTH-type transcriptional repressor NanR
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
263
29,814
DNA-binding;Reference proteome;Repressor;Transcription;Transcription regulation
GO:0003677; GO:0003700; GO:0045892
Inferred from homology
2
null
null
null
PF07729;PF00392;
IPR011711;IPR008920;IPR000524;IPR023730;IPR036388;IPR036390;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
nanR SARI_04284
false
Salmonella enterica
1,104
row_337131
false
null
409,535
P0A2D1
MGKLTGKTALITGASQGIGEGIARVFARHGANLILLDISDEIEKLADELGGRGHRCTAVKADVRDFASVQAAVARAKETEGRIDILVNNAGVCRLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLPESVSVGV
Oxidoreductase UcpA (EC 1.-.-.-)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
263
27,870
Oxidoreductase;Reference proteome
GO:0016491
Inferred from homology
2
null
null
null
PF13561;
IPR036291;IPR002347;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
ucpA STM2445
false
Salmonella enterica
1,105
row_391994
false
null
419,595
P40701
MFYALYFEIHHLVASAALGFARVAPIFFFLPFLNSGVLSGAPRNAIIILVALGVWPHALNEAPPFLSVAMIPLVLQEAAVGVMLGCLLSWPFWVMHALGCIIDNQRGATLSSSIDPANGIDTSEMANFLNMFAAVVYLQNGGLVTMVDVLNKSYQLCDPMNECTPSLPPLLTFINQVAQNALVLASPVVLVLLLSEVFLGLLSRFAPQMNAFAISLTVKSGIAVLIMLLYFSPVLPDNVLRLSFQATGLSSWFYERGATHVLE
Surface presentation of antigens protein SpaR
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
263
28,487
3D-structure;Cell membrane;Membrane;Reference proteome;Transmembrane;Transmembrane helix;Virulence
GO:0005886; GO:0006605
Evidence at protein level
2
SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
null
TRANSMEM 12..32; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 46..66; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 82..102; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 127..147; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 182..202; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 211..231; /note="Helical"; /evidence="ECO:0000255"
PF01311;
IPR002010;IPR006304;
6PEM;6PEP;6Q14;6Q15;6Q16;7AGX;7AH9;7AHI;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
spaR STM2888
false
Salmonella enterica
1,106
row_401793
false
null
435,166
Q05591
MNEGDVLVVGGTSDARALCRQLDAANVAYTLSVATPAGKALAGDIKGQVRCGRLEYGQMVAWLKENRTRWVIDASHPYAEMVSHNLLRACETAGVLLSRYQRPEQLSNLTHPLLYTARSIADACEIARRFGPRVLLTTGSKDLAVWRAGLAEKTLLARVLPVAEVIQRCSELGFGVGEIFALCGPFSADFNAAFYHQCRADVVITKASGAEGGYQEKVQPCLDAGIPCIVIARPTPLVTGDELLESQAAFAQRLSRWLAAAKE
Cobalt-precorrin-6A reductase (EC 1.3.1.106)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
263
28,403
Cobalamin biosynthesis;NAD;Oxidoreductase;Reference proteome
GO:0009236; GO:0016994
Inferred from homology
2
null
null
null
PF02571;
IPR003723;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
cbiJ STM2026
false
Salmonella enterica
1,107
row_416872
false
null
473,640
Q57L59
MSQSGSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVADVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRITVHTDDIQRWAPRQTVRFDLIISNPPYYEPGVECATPQREQARYTATLDHQTLLAIAADCITEDGFFCVVLPEQIGNAFTQQALNMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFSDRLVIRGSDQHYSESYTALTQAFYLFMWGVNGERIDGPDSASCCG
tRNA1(Val) (adenine(37)-N6)-methyltransferase (EC 2.1.1.223) (tRNA m6A37 methyltransferase)
Salmonella choleraesuis (strain SC-B67)
321,314
263
29,112
Cytoplasm;Methyltransferase;S-adenosyl-L-methionine;Transferase;tRNA processing
GO:0003676; GO:0005737; GO:0008033; GO:0016430; GO:0032259
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01872}.
null
null
PF05175;
IPR002052;IPR029063;IPR007848;IPR050210;IPR022882;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella enterica subsp. enterica serovar Choleraesuis (no rank)
yfiC SCH_2647
false
Salmonella enterica
1,108
row_454794
false
null
46,100
Q8ZPX9
MTLSIPPSIQCQTEAACRLITRVTGDTLRAIHLYGSAVAGGLKPNSDIDLLVTICQPLTEAQRATLMQELLALSSPPGASAEKRALEVTVVLYSQLVPWCFPPSREMQFGEWLREDICQGIYEPAQQDWDMVLLITQILETSIPLKGERAERLFTPAPAAQLLKALRYPLDLWQSTADVQGDEYHIVLTLARIWYTLSTGRFTSKDAAADWLLPQLPEDYAATLRAAQREYLGLEQQDWHILLPAVVRFVDFAKAHIPTQFT
Aminoglycoside (3'') (9) adenylyltransferase (EC 2.7.7.47) (AadA) (Aminoglycoside nucleotidyltransferase (3'') (9) adenyltransferase) (ANT(3'') (9) adenyltransferase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
262
29,348
3D-structure;Antibiotic resistance;ATP-binding;Magnesium;Metal-binding;Nucleotide-binding;Nucleotidyltransferase;Reference proteome;Transferase
GO:0005524; GO:0009012; GO:0046677; GO:0046872; GO:0070566
Evidence at protein level
5
null
null
null
PF13427;PF01909;
IPR024172;IPR025184;IPR043519;IPR002934;
4CS6;5G4A;5LPA;5LUH;6FZB;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
aadA STM1264
false
Salmonella enterica
1,109
row_39765
false
null
74,250
P16657
MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSSIVLPCDVAEDASIDAMFAELGNVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKVAHDISSYSFVAMAKACRTMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNELELK
Enoyl-[acyl-carrier-protein] reductase [NADH] FabI (ENR) (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
262
27,761
Antibiotic resistance;Biotin biosynthesis;Direct protein sequencing;Fatty acid biosynthesis;Fatty acid metabolism;Lipid biosynthesis;Lipid metabolism;NAD;Oxidoreductase;Reference proteome
GO:0004318; GO:0009102; GO:0030497; GO:0042802; GO:0046677
Evidence at protein level
4
null
null
null
PF13561;
IPR014358;IPR036291;IPR002347;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
fabI envM STM1700
false
Salmonella enterica
1,110
row_65033
false
null
199,111
P32200
MIDKSAFIHPTAIVEDGAVIGANAHIGPFCIVGPQVEIGEGTVLKSHVVVNGQTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHVAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREGLVAIRNAYKLLYRSGKTLDEAKLEIAELAEKHPEVKAFTEFFERSTRGPIR
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (UDP-N-acetylglucosamine acyltransferase) (EC 2.3.1.129)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
262
28,089
Acyltransferase;Cytoplasm;Lipid A biosynthesis;Lipid biosynthesis;Lipid metabolism;Reference proteome;Repeat;Transferase
GO:0005737; GO:0008780; GO:0009245; GO:0016020
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm.
null
null
PF13720;PF00132;
IPR029098;IPR037157;IPR001451;IPR018357;IPR010137;IPR011004;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
lpxA STM0228
false
Salmonella enterica
1,111
row_185695
false
null
472,849
Q56032
MNKIHVTYKNLLLPITFIAATLISACDNDKDAMAEAEKNQEKYMQKIQQKEHQQSMFFYDKAEMQKAIANINAKGGANLAIIEVRFFKGGYSFIRQSVNTPAKVEVFKFNNGYWGGPSPVNLTIFGTITEEQKQEALKEALFKFDSINFSIIPERIQETIKRANASGIISVTEDSDIVVRAEIAHNGEFVYDITITAKNTARAVMTLNKDGSIAGYEIKEPFDPKKEAEKAQQLVEQSRKDIESQRKKAAGKMNEIQQTFKK
Probable lipoprotein EnvF
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
262
29,572
Cell membrane;Lipoprotein;Membrane;Palmitate;Reference proteome;Signal
GO:0005886
Inferred from homology
2
SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Lipid-anchor {ECO:0000305}.
SIGNAL 1..25; /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
null
null
null
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
envF STM1240
false
Salmonella enterica
1,112
row_454012
false
null
298,198
Q8Z9L5
MSESLHLTRNGPILEITLDRPKANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSELMESARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGYRYIRSGVLKHYPSVLHSEDALEGPQAFAEKRAPVWKGR
Carnitinyl-CoA dehydratase (EC 4.2.1.149) (Crotonobetainyl-CoA hydratase)
Salmonella typhi
90,370
261
28,076
Lyase
GO:0006635; GO:0008735; GO:0009437; GO:0016836
Inferred from homology
3
null
null
null
PF00378;
IPR022852;IPR029045;IPR018376;IPR001753;IPR014748;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
caiD STY0080 t0071
false
Salmonella enterica
1,113
row_282093
false
null
354,139
A9MR28
MSESLRLTRNGPILEITLDRPKANAIDARTSFAMGEAFLSFRDDPHLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTELFDLNKPVIAAVNGYAFGGGFELALAADFIICADHASFALPEAKLGIVPDSGGVLRLPKILPPAIVNDMVMTGRRMTAEEALRWGVVNRVVSPHELLDSARELARQLVQSAPLAVAALKEITRTTRDMSVEEGYRYIRSGSLRHYPAVLHSEDALEGPLAFAEKRDPEWKGH
Carnitinyl-CoA dehydratase (EC 4.2.1.149) (Crotonobetainyl-CoA hydratase)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
261
28,194
Lyase;Reference proteome
GO:0006635; GO:0008735; GO:0009437; GO:0016836
Inferred from homology
2
null
null
null
PF00378;
IPR022852;IPR029045;IPR018376;IPR001753;IPR014748;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
caiD SARI_02930
false
Salmonella enterica
1,114
row_337184
false
null
9,748
P02911
MKKTVLALSLLIGLGATAASYAALPQTVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVDVVAYANQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALTELRQDGTYDKMAKKYFDFNVYGD
Lysine/arginine/ornithine-binding periplasmic protein (LAO-binding protein)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
260
28,200
3D-structure;Amino-acid transport;Disulfide bond;Periplasm;Reference proteome;Signal;Transport
GO:0006865; GO:0016597; GO:0030288
Evidence at protein level
5
SUBCELLULAR LOCATION: Periplasm {ECO:0000269|PubMed:6273842}.
SIGNAL 1..22
null
PF00497;
IPR005768;IPR018313;IPR001638;
1LAF;1LAG;1LAH;1LST;2LAO;5OWF;6FT2;6MKU;6MKW;6MKX;6ML0;6ML9;6MLA;6MLD;6MLE;6MLG;6MLI;6MLJ;6MLN;6MLO;6MLP;6MLV;6XKS;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
argT STM2355
false
Salmonella enterica
1,115
row_8162
false
null
71,032
P02910
MKKLALSLSLVLAFSSATAAFAAIPQKIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQEIAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQGTTQETFGNEHWAPKGIEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYGG
Histidine-binding periplasmic protein (HBP)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
260
28,379
3D-structure;Amino-acid transport;Direct protein sequencing;Disulfide bond;Periplasm;Reference proteome;Signal;Transport
GO:0006865; GO:0016597; GO:0030288
Evidence at protein level
4
SUBCELLULAR LOCATION: Periplasm {ECO:0000305|PubMed:6273842}.
SIGNAL 1..22; /evidence="ECO:0000269|PubMed:7007375"
null
PF00497;
IPR005768;IPR018313;IPR001638;
1HPB;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
hisJ STM2354
false
Salmonella enterica
1,116
row_61951
false
null
298,659
Q8ZMD5
MLEILYQDPWLVAVNKPAGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGVLLMGLSSEAGRRLAQQFEQHHIRKRYHAIVRGWLMDDAVLDYPLVEERDKIADKFAREDKAPQPAVTQYRGLATVEMAVPTGRYPTTRYGLVELEPKTGRKHQLRRHLAHLRHPIIGDSKHGDLRQNRSAAEHFACRRLMLHASRLELTHPFTGQPLIIQAGLDETWMQALTQFGWRGLLPDNERVEFTAASRQDETHLT
tRNA pseudouridine synthase C (EC 5.4.99.26) (tRNA pseudouridine(65) synthase) (tRNA pseudouridylate synthase C) (tRNA-uridine isomerase C)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
260
30,045
Isomerase;Reference proteome;tRNA processing
GO:0000455; GO:0003723; GO:0008033; GO:0009982; GO:0160149
Inferred from homology
3
null
null
null
PF00849;
IPR020103;IPR006224;IPR006145;IPR050188;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
truC STM2964
false
Salmonella enterica
1,117
row_282551
false
null
307,905
Q9L6M2
MFDIGVNLTSSQFAKDRDDVVARAFAAGVKGMLLTGTNIHESQQALKLARRYPHCWSTAGVHPHDSSQWSPASEDAIIALANQPEVVAIGECGLDFNRNFSTPQEQERAFQAQLQIAAELQIPIFMHCRDAHERFLVLLDPWLDSLPGAILHCFTGSRQQMQACVDRGLYIGITGWVCDERRGLELRELLPFIPAEKLLIETDAPYLLPRDLTPKPTSRRNEPAYLPHILERIALWRGEDPQWLAAMTDANARTLFEVVF
3'-5' ssDNA/RNA exonuclease TatD (EC 3.1.11.-) (EC 3.1.13.-) (DNase TatD)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
260
29,271
Cytoplasm;Exonuclease;Hydrolase;Magnesium;Metal-binding;Nuclease;Reference proteome
GO:0000175; GO:0000287; GO:0005737; GO:0008310
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00901}.
null
null
PF01026;
IPR018228;IPR024918;IPR032466;IPR001130;IPR050891;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
tatD STM3976
false
Salmonella enterica
1,118
row_291582
false
null
409,389
P0A1J3
MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL
Flagellar basal-body rod protein FlgG (Distal rod protein)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
260
27,770
3D-structure;Bacterial flagellum;Direct protein sequencing;Reference proteome
GO:0009288; GO:0009426; GO:0071978
Evidence at protein level
2
SUBCELLULAR LOCATION: Bacterial flagellum basal body.
null
null
PF00460;PF06429;PF22692;
IPR001444;IPR019776;IPR020013;IPR010930;IPR037925;IPR012834;IPR053967;
5WRH;6JF2;6JZR;7BIN;7CBM;7CGO;7E80;7E82;8WKI;8WKK;8WL2;8WLP;8WLQ;8WLT;8WO5;8WOE;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
flgG fla FVII flaL STM1179
false
Salmonella enterica
1,119
row_391848
false
null
98,559
Q8ZJV8
MTDLKASSLRALKLMDLTTLNDDDTNEKVIALCHQAKTPVGNTAAICIYPRFIPIARKTLKEQGTPDIRIATVTNFPHGNDDIDIALAETRAAIAYGADEVDVVFPYRALIAGNEQVGFDLVKACKDACAAANVLLKVIIETGELKEEALIRKASEISIKAGADFIKTSTGKVPVNATPESARIMMEVIRDMGVSKTVGFKPAGGVRTAEDAQKFLAIADELFGADWADSRHYRFGASSLLASLLKALGHGDGKSASSY
Deoxyribose-phosphate aldolase (DERA) (EC 4.1.2.4) (2-deoxy-D-ribose 5-phosphate aldolase) (Phosphodeoxyriboaldolase) (Deoxyriboaldolase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
259
27,685
Cytoplasm;Lyase;Reference proteome;Schiff base
GO:0004139; GO:0005737; GO:0006018; GO:0009264; GO:0016052
Evidence at protein level
4
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00592}.
null
null
PF01791;
IPR013785;IPR011343;IPR002915;IPR023649;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
deoC STM4567
false
Salmonella enterica
1,120
row_87726
false
null
430,758
P96068
MAQQVNEWLIALAVAFIRPLSLSLLLPLLKSGSLGAALLRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVIIGFSIGFCAAVPFWAVDMAGFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLPPGRTLLFDQQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFSMPLKSILVLLTLLISFPYALHHYLVESDKFYIYLKDWFPSV
Secretion system apparatus protein SsaT
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
259
29,218
Cell membrane;Membrane;Protein transport;Reference proteome;Transmembrane;Transmembrane helix;Transport
GO:0005886; GO:0006605; GO:0015031
Inferred from homology
2
SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
null
TRANSMEM 9..29; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 35..55; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 78..98; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 127..147; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 185..205; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 214..234; /note="Helical"; /evidence="ECO:0000255"
PF01311;
IPR002010;IPR006304;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
ssaT STM1421
false
Salmonella enterica
1,121
row_412520
false
null
514,183
Q8Z5V9
MALLEICCYSMECALTAQRNGADRIELCAAPKEGGLTPSFGILRSVREHITIPVHPIIRPRGGDFYYTDGEFAAMLEDIRLVRELGFPGLVTGVLTVDGDVDMSRMEKIMAAAGPLAVTFHRAFDMCANPFNALKNLADAGVARVLTSGQKADAAQGLSIIMELIAQGDAPIIMAGAGVRANNLQNFLDAGVREVHSSAGVLLPSPMRYRNQGLSMSADIQADEYSRYRVEGAAVAENERNHCSPSGQMIFTVASCRPI
PF03932 family protein CutC
Salmonella typhi
90,370
259
27,804
Cytoplasm
GO:0005507; GO:0005737
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00795}.
null
null
PF03932;
IPR005627;IPR036822;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
cutC STY2115 t0970
false
Salmonella enterica
1,122
row_494716
false
null
9,749
P02915
MMSENKLHVIDLHKRYGGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGDPEQVFGNPQSPRLQQFLKGSLK
Histidine/lysine/arginine/ornithine transport ATP-binding protein HisP (EC 7.4.2.1)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
258
28,771
3D-structure;Amino-acid transport;ATP-binding;Cell inner membrane;Cell membrane;Membrane;Nucleotide-binding;Reference proteome;Translocase;Transport
GO:0005524; GO:0005886; GO:0015424; GO:0016887
Evidence at protein level
5
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000269|PubMed:2033074}; Peripheral membrane protein {ECO:0000269|PubMed:2033074}. Note=Binds much more tightly to the membrane in the presence of HisQ and HisM. {ECO:0000269|PubMed:2033074}.
null
null
PF00005;
IPR003593;IPR030679;IPR003439;IPR017871;IPR050086;IPR027417;
1B0U;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
hisP STM2351
false
Salmonella enterica
1,123
row_8163
false
null
140,449
A9MI11
MMNPLIIKLGGVLLDNEEALERLFTALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIGIIAGALAGTANKTLLAWAKKHHIASVGLFLGDGDSVKVIQLDEALGHVGLAQPGSPKLINTLLENDFLPVVSSIGVTEDGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIDQGIITDGMIVKVNAALDAARALGRPVDIASWRHADQLPALFNGTPIGTRILA
Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (NAGK)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
258
27,041
Amino-acid biosynthesis;Arginine biosynthesis;ATP-binding;Cytoplasm;Kinase;Nucleotide-binding;Reference proteome;Transferase
GO:0003991; GO:0005524; GO:0005737; GO:0006526; GO:0042450
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00082}.
null
null
PF00696;
IPR036393;IPR004662;IPR037528;IPR001048;IPR041731;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
argB SARI_03542
false
Salmonella enterica
1,124
row_128330
false
null
140,525
A9ML11
MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYADEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIRSIDDAAKILSFGADKISVNSPALSDPTLITRLADRFGVQCIVVGIDTWFDDATGKYHVNQYTGDENRTRVTQWETLDWVQEVQQRGAGEIVLNMMNQDGVRNGYDLTQLKKVRDVCRVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAGQGVEIRIC
Imidazole glycerol phosphate synthase subunit HisF (EC 4.3.2.10) (IGP synthase cyclase subunit) (IGP synthase subunit HisF) (ImGP synthase subunit HisF) (IGPS subunit HisF)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
258
28,386
Amino-acid biosynthesis;Cytoplasm;Histidine biosynthesis;Lyase;Reference proteome
GO:0000105; GO:0000107; GO:0005737; GO:0016829
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01013}.
null
null
PF00977;
IPR013785;IPR006062;IPR004651;IPR050064;IPR011060;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
hisF SARI_00807
false
Salmonella enterica
1,125
row_128406
false
null
46,076
Q8Z5I4
MKAVILAGGLGTRLSEETIVKPKPMVEIGGKPILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHMAENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKDDEAFLFTYGDGVADLDIKATIDFHKAHGKKATLTATFPPGRFGALDIQAGQVRSFQEKPKGDGAMINGGFFVLNPSVIDLIDNDATTWEQEPLMTLAQQGELMAFEHPGFWQPMDTLRDKVYLEGLWEKGKAPWKTWE
Glucose-1-phosphate cytidylyltransferase (EC 2.7.7.33) (CDP-glucose pyrophosphorylase)
Salmonella typhi
90,370
257
29,007
3D-structure;Lipopolysaccharide biosynthesis;Magnesium;Metal-binding;Nucleotide-binding;Nucleotidyltransferase;Transferase
GO:0000166; GO:0009243; GO:0046872; GO:0047343
Evidence at protein level
5
null
null
null
PF00483;
IPR046981;IPR013446;IPR005835;IPR029044;
1TZF;1WVC;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
rfbF STY2302 t0780
false
Salmonella enterica
1,126
row_39741
false
null
63,317
A9N0K8
MDRIIEKLESGWWIVSHEQKLWLPYGELPHGLAANFDLVGQRALRIGEWQGEPVWLVLQHRRHDMGSVRQVIDQDAGLFQLAGRGVQLAEFYRSHKFCGYCGHPMHPSKTEWAMLCSHCRERYYPQIAPCIIVAIRREDSILLAQHVRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGEIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAEYD
NAD-capped RNA hydrolase NudC (DeNADding enzyme NudC) (EC 3.6.1.-) (NADH pyrophosphatase) (EC 3.6.1.22)
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
257
29,607
Hydrolase;Magnesium;Manganese;Metal-binding;NAD;Zinc
GO:0000210; GO:0000287; GO:0005829; GO:0006734; GO:0006742; GO:0008270; GO:0019677; GO:0030145; GO:0035529; GO:0110153
Inferred from homology
4
null
null
null
PF00293;PF09297;
IPR050241;IPR049734;IPR015797;IPR020084;IPR000086;IPR022925;IPR015376;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
nudC SPAB_05156
false
Salmonella enterica
1,127
row_54891
false
null
207,195
P63365
MSMVETAPSKIQVRDLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNKMYSLYPEQRAEGEILLDGDNILTNTQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDHTAFMYLGELIEFSNTDDLFTKPAKKQTEDYITGRYG
Phosphate import ATP-binding protein PstB (EC 7.3.2.1) (ABC phosphate transporter) (Phosphate-transporting ATPase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
257
29,016
ATP-binding;Cell inner membrane;Cell membrane;Membrane;Nucleotide-binding;Phosphate transport;Reference proteome;Translocase;Transport
GO:0005524; GO:0005886; GO:0015415; GO:0016887; GO:0035435
Inferred from homology
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_01702}; Peripheral membrane protein {ECO:0000255|HAMAP-Rule:MF_01702}.
null
null
PF00005;
IPR003593;IPR003439;IPR017871;IPR027417;IPR005670;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
pstB STM3854
false
Salmonella enterica
1,128
row_193618
false
null
208,214
P67470
MSVPLILTLLAGAATFIGAFLGVLGQKPSNRVLAFSLGFAAGIMLLISLMEMLPAALDTEGMSPVLGYGMFIIGLLGYFGLDRLLPHAHPQDLVQKRQQPLPGSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPVYAATGSKRTAIFWAGISGMAEILGGVLAWLILGSLVSPIVMAAIMAAVAGIMVALSVDELMPLAKEIDPNNNPSYGVLCGMSIMGLSLVILQTIGIG
Zinc transporter ZupT (Low affinity zinc transporter ZupT)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
257
26,544
Cell inner membrane;Cell membrane;Ion transport;Iron;Membrane;Metal-binding;Reference proteome;Transmembrane;Transmembrane helix;Transport;Zinc;Zinc transport
GO:0005385; GO:0005886; GO:0016020; GO:0046872; GO:0071577
Evidence at protein level
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_00548}; Multi-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_00548}.
null
TRANSMEM 5..25; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 32..52; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 61..81; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 109..129; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 137..157; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 171..191; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 195..215; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 236..256; /note="Helical"; /evidence="ECO:0000255"
PF02535;
IPR003689;IPR023498;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
zupT STM3190
false
Salmonella enterica
1,129
row_194636
false
null
409,551
P0A2G9
MSETFDPRCVWFVGAGPGDRELITLKGYRLLQQAQVVIYAGSLINTELLDYCPAQAERYDSAELHLEQIIELMAAGVKAGKTVVRLQTGDVSLYGSVREQGEELTRRGIDWQVVPGVSAFLGAAAELGVEYTVPEVSQSLIITRLEGRTPVPAREQLEAFASHQTSMAIYLSVQRIHRVAERLIAGGYPATTPVAVIYKATWPESQTVRGTLADISDKVRDAGIRKTALILVGNFLGKEYHYSRLYAADFSHEYRKA
Cobalt-precorrin-4 C(11)-methyltransferase (EC 2.1.1.271) (Cobalt-precorrin-3 methylase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
257
28,376
Cobalamin biosynthesis;Direct protein sequencing;Methyltransferase;Reference proteome;S-adenosyl-L-methionine;Transferase
GO:0009236; GO:0032259; GO:0046026
Evidence at protein level
2
null
null
null
PF00590;
IPR000878;IPR035996;IPR014777;IPR014776;IPR006362;IPR050161;IPR003043;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
cbiF STM2029
false
Salmonella enterica
1,130
row_392010
false
null
531,501
A9MR84
MLILISPAKTLDYQSPLATTRYTQPELLDHSQQLIHQVRQLSAPQIARLMGISDKLADLNATRFHDWQPHFTPDNARQAILAFKGDVYTGLQAETFSDADFDFAQQHLRMLSGLYGLLRPLDLMQPYRLEMGIRLENPRGKDLYQFWGDIITDKLNETLASQGDRVVINLASEEYFKSVKPKKLNAELIKPVFLDEKNGKFKVISFYAKKARGLMSRFIIENRLTKPEQLTAFNSEGYFFDEETSTQDELVFKRYEQ
UPF0246 protein YaaA
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
257
29,718
Reference proteome
GO:0005829; GO:0033194
Inferred from homology
1
null
null
null
PF03883;
IPR005583;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
yaaA SARI_02987
false
Salmonella enterica
1,131
row_511834
false
null
94,074
Q7CPQ8
MNNAIFPNKFKAALAAQQVQIGCWSALASPITTEVLGLAGFDWLVLDGEHAPNDVTTLIPQLMALKGSASAPVVRVPTNEPVIIKRMLDIGFYNFLIPFVETQEEAARAVASTRYPPEGIRGVSVSHRANMFGTVPDYFAQSNKNITIIVQIESQLGVDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQQTIQHIFARAKAHGKPCGILAPVEADARRYLEWGATFVAVGSDLGAFRASTQKLADTFKK
5-keto-4-deoxy-D-glucarate aldolase (KDGluc aldolase) (KDGlucA) (EC 4.1.2.20) (2-dehydro-3-deoxy-D-glucarate aldolase) (2-keto-3-deoxy-D-glucarate aldolase) (5-dehydro-4-deoxy-D-glucarate aldolase) (Alpha-keto-beta-deoxy-D-glucarate aldolase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
256
27,321
Lyase;Magnesium;Metal-binding;Reference proteome
GO:0000287; GO:0005737; GO:0008672; GO:0016832; GO:0042838; GO:0046392
Inferred from homology
4
null
null
null
PF03328;
IPR005000;IPR017648;IPR050251;IPR015813;IPR040442;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
garL STM3249
false
Salmonella enterica
1,132
row_83569
false
null
140,424
A9MHE0
MLRIADKTFDSHLFTGTGKFASAQLMVDAIRASGSQLVTLAMKRVDLRKPNDAILSPLLEAGVTLLPNTSGAKTAEEAIFAAQLAREALGTHWLKLEIHPDARWLLPDPIETLKAAGELVKQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGSNQGLETRAMLEIIIQQATVPVVVDAGIGVPSHATQALEMGADAVLVNTAIAVANDPVMMANAFRLAVEAGVLARQAVPGNRSVYASATSPLTGFLEVSA
Thiazole synthase (EC 2.8.1.10)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
256
26,813
Cytoplasm;Reference proteome;Schiff base;Thiamine biosynthesis;Transferase
GO:0005737; GO:0009229; GO:1990107
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00443}.
null
null
PF05690;
IPR013785;IPR033983;IPR008867;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
thiG SARI_03498
false
Salmonella enterica
1,133
row_128308
false
null
140,545
A9MMB5
MNDIWWQTYGEGNCHLVLLHGWGLNAEVWHCIREELGSHFTLHLIDLPGYGRSTGFGAMTLEEMTAQVAKNAPDQAIWLGWSLGGLVASQMALIHPERVQALVTVASSPCFSAREGWPGIKPEVLAGFQQQLSDDFERTVERFLALQTLGTETARQDARTLKSVVLAQSMPDVEVLNGGLEILKTVDLREPLKSVNMPFLRLYGYLDGLVPRKIAPLLDTLWPHSTSQIIVKAAHAPFISHPAAFCQALAALKSSL
Pimeloyl-[acyl-carrier protein] methyl ester esterase (EC 3.1.1.85) (Biotin synthesis protein BioH) (Carboxylesterase BioH)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
256
28,191
Biotin biosynthesis;Cytoplasm;Hydrolase;Reference proteome;Serine esterase
GO:0005737; GO:0009102; GO:0090499
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01260}.
null
null
PF00561;
IPR000073;IPR029058;IPR010076;IPR050228;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
bioH SARI_04104
false
Salmonella enterica
1,134
row_128426
false
null
354,315
A9MYK3
MKIITCYKCVPDEQDIAINNADGTLDFSKADSKISQYDLNAIEAACQLKQQLGDAQVVAMSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQHTATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSKILSLTDSTLTVERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSPADIGLNSVPAYSAQQVAAPKQRERQRVVIEGDGEEQIAAFVENLRKII
Protein FixA
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
256
27,222
Electron transport;Transport
GO:0009055; GO:0009437
Inferred from homology
2
null
null
null
PF01012;
IPR000049;IPR014730;IPR012255;IPR033948;IPR023463;IPR014729;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
fixA SPAB_00094
false
Salmonella enterica
1,135
row_337360
false
null
140,748
A9MZG8
MRHPLVMGNWKLNGSRHMVNELVANLRKELAGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAEAAKQA
Triosephosphate isomerase (TIM) (TPI) (EC 5.3.1.1) (Triose-phosphate isomerase)
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
255
26,887
Cytoplasm;Gluconeogenesis;Glycolysis;Isomerase
GO:0004807; GO:0005829; GO:0006094; GO:0006096; GO:0019563; GO:0046166
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00147}.
null
null
PF00121;
IPR013785;IPR035990;IPR022896;IPR000652;IPR020861;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
tpiA SPAB_05055
false
Salmonella enterica
1,136
row_128628
false
null
190,114
P0A193
MSQPLLAVNGLMMRFGGLLAVNNVSLELREREIVSLIGPNGAGKTTVFNCLTGFYKPTGGTITLRERHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEEIRNNPDVIRAYLGEA
High-affinity branched-chain amino acid transport ATP-binding protein LivG (LIV-I protein G)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
255
28,452
Amino-acid transport;ATP-binding;Nucleotide-binding;Reference proteome;Transport
GO:0005304; GO:0005524; GO:0005886; GO:0015188; GO:0015192; GO:0015808; GO:0016887; GO:0042941; GO:1903805; GO:1903806
Inferred from homology
3
null
null
null
PF00005;PF12399;
IPR003593;IPR051120;IPR003439;IPR017871;IPR032823;IPR027417;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
livG livF STM3561
false
Salmonella enterica
1,137
row_176961
false
null
373,696
B4T2B3
MFIGIVSLFPEMFRAITDYGVTGRAVKKGLLNIQSWSPRDFAHDRHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGVDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVARFIPGVLGHEASAIEDSFADGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLALTEEQARLLAEFKTEHAQQQHKHDGMA
tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
Salmonella newport (strain SL254)
423,368
255
28,348
Cytoplasm;Methyltransferase;S-adenosyl-L-methionine;Transferase;tRNA processing
GO:0002939; GO:0005829; GO:0052906
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00605}.
null
null
PF01746;
IPR029028;IPR023148;IPR002649;IPR029026;IPR016009;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella newport (no rank)
trmD SNSL254_A2888
false
Salmonella enterica
1,138
row_356454
false
null
415,564
P17449
MNMNQTTSPALSQVETAIRVPAGNFAKYNYYSVFDIVRQTRKQFINANMSWPGSRGGKAWDLAMGQAQYIRCMFRENQLTRRVRGTLQQTPDNGTNLSSSAVGGIQGQAERRPDLATLMVVNDAINQQIPTLLPYHFPHDQVELSLLNTDVSLEDIISESSIDWPWFLSNSLTGDNSNYAMELASRLSPEQQTLPTEPDNSTATDLTSFYQTNLGLKTADYTPFEALNTFARQLAITVPPGGTVDCGYSACQPAV
28.1 kDa virulence protein (Protein M3 in mba region)
Salmonella choleraesuis (strain SC-B67)
321,314
255
28,184
Plasmid;Virulence
null
Inferred from homology
2
null
null
null
PF03538;
IPR018003;IPR003518;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella enterica subsp. enterica serovar Choleraesuis (no rank)
spvA SCH_V03
false
Salmonella enterica
1,139
row_397863
false
null
200,340
P37602
MNTIWGAELHYAPDYWPLWLIYAGVVVLLMLVGLVIHALLRRMLAPKTAGGEEHRDYLYSLAIRRWHWGNALLFVLLLLSGLFGHFSLGPVALMVQVHTWCGFALLAFWVGFVLINLTTGNGRHYRVNFSGLVTRCIRQTRFYLFGIMKGEAHPFVATEQNKFNPLQQLAYLAIMYALVPLLIITGLLCLYPQVAGLGPVMLVLHMALAIIGLLFICAHLYLCTLGDTPGQIFRSMVDGYHRHRTAPRGDKSAV
Thiosulfate reductase cytochrome B subunit PhsC (Thiosulfate reductase subunit gamma)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
254
28,547
Cell inner membrane;Cell membrane;Iron;Membrane;Metal-binding;Reference proteome;Transmembrane;Transmembrane helix
GO:0005886; GO:0009055; GO:0020037; GO:0022904; GO:0046872
Evidence at protein level
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000305|PubMed:22081391}; Multi-pass membrane protein {ECO:0000255}.
null
TRANSMEM 16..36; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 71..91; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 97..117; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 169..189; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 196..216; /note="Helical"; /evidence="ECO:0000255"
PF01292;
IPR011577;IPR016174;IPR051542;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
phsC STM2063
false
Salmonella enterica
1,140
row_186894
false
null
298,588
Q8ZKP8
MNSQFAGLTREACVALLASYPLSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQTFIKDVHLMVADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLTQDQLPSLIAQGIDRVVSGSALFRDDRLVENTRSWRAMFKVAGDTTFLPSTA
Putative epimerase LsrE (EC 5.1.3.-)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
254
27,635
Cell membrane;Isomerase;Membrane;Metal-binding;Reference proteome;Transmembrane;Transmembrane helix
GO:0004750; GO:0005829; GO:0005886; GO:0005975; GO:0009052; GO:0046872
Evidence at transcript level
3
SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
null
TRANSMEM 14..34; /note="Helical"; /evidence="ECO:0000255"
PF00834;
IPR013785;IPR000056;IPR011060;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
lsrE STM4080
false
Salmonella enterica
1,141
row_282480
false
null
401,592
E1W823
MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQFDLLETRHALEGIAAYYAALRSTDEDKDRIRELHHAIELAQESGDLDAESEAVLQYQIAVTEAAHNVVLLHLLRCMEPMLAQNVRQNFELLYARREMLPLVSTHRTRIFEAIMAGKPEEAREASHRHLAFIEEIMLDRSREESRRERALRRLEQRKN
Pyruvate dehydrogenase complex repressor
Salmonella typhimurium (strain SL1344)
216,597
254
29,412
DNA-binding;Repressor;Transcription;Transcription regulation
GO:0003677; GO:0003700
Inferred from homology
2
null
null
null
PF07729;PF00392;
IPR011711;IPR008920;IPR000524;IPR036388;IPR036390;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
pdhR SL1344_0151
false
Salmonella enterica
1,142
row_384168
false
null
46,096
Q8ZPA3
MLSKKFGLSMIVLGIMSSSAFADSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLELFSSYCQSRHCKLNITEYAWDGMLGAVASGQADVAFSGISITDKRKKVIDFSEPYYINSFYLVSMANHKITLNNLNELNKYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYPTYNETMADLKNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFKNVDQLGIAFKKGSPVRDDFNLWLKEQGPQKISGIVDSWMK
ABC transporter D-alanine-binding periplasmic protein (D-alanine transporter in Salmonella)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
253
28,439
3D-structure;Amino-acid transport;Periplasm;Reference proteome;Signal;Transport;Virulence
GO:0016597; GO:0030288; GO:0035796; GO:0042941; GO:0052170
Evidence at protein level
5
SUBCELLULAR LOCATION: Periplasm {ECO:0000269|PubMed:22418438}.
SIGNAL 1..22; /evidence="ECO:0000255"
null
PF00497;
IPR001638;
4F3S;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
dalS STM1633
false
Salmonella enterica
1,143
row_39761
false
null
140,390
A9MF31
MRILLSNDDGIHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
5'/3'-nucleotidase SurE (EC 3.1.3.5) (EC 3.1.3.6) (Exopolyphosphatase) (EC 3.6.1.11) (Nucleoside monophosphate phosphohydrolase)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
253
27,008
Cytoplasm;Hydrolase;Metal-binding;Nucleotide-binding;Reference proteome
GO:0000166; GO:0004309; GO:0005737; GO:0008253; GO:0008254; GO:0046872
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00060}.
null
null
PF01975;
IPR030048;IPR002828;IPR036523;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
surE SARI_00029
false
Salmonella enterica
1,144
row_128274
false
null
190,149
P0A1F6
MSKSDVFHLGLTKNDLQGAQLAIVPGDPERVEKIAALMDKPVKLASHREFTSWRAELDGKAVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGASLHFAPMEFPAVADFACTTALVEAAKSIGATTHVGVTASSDTFYPGQERYDTYSGRVVRRFKGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAGVIVNRTQQEIPNAETMKQTESHAVKIVVEAARRLL
Uridine phosphorylase (UPase) (UrdPase) (EC 2.4.2.3)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
253
27,139
3D-structure;Cytoplasm;Glycosyltransferase;Reference proteome;Transferase
GO:0004850; GO:0005829; GO:0009164; GO:0009166; GO:0044206
Evidence at protein level
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:P12758}.
null
null
PF01048;
IPR018016;IPR000845;IPR035994;IPR010058;
1RYZ;1SJ9;1Y1Q;1Y1R;1Y1S;1Y1T;1ZL2;2HN9;2HRD;2HSW;2HWU;2I8A;2IQ5;2OEC;2OXF;2PGA;2QDK;2RJ3;3C74;3DDO;3DPS;3FWP;4E1V;4OGK;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
udp STM3968 STMD1.21
false
Salmonella enterica
1,145
row_176996
false
null
374,941
B5BB70
MVSSSTTVPRSGVYYFSQGWKLVTLPGIRRFVILPLLVNIVLMGGAFWWLFTQLDAWIPSLMSHVPDWLQWLSYLLWPIAVISVLLVFGYFFSTLANWIAAPFNGLLAEQLEARLTGATPPDTGILGIMKDVPRIMKREWQKLAWYLPRAIVLLVLYFIPGIGQTIAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKTMRAALRTQKVANMQFGALTSLFTMIPVLNLFIMPVAVCGATAMWVDCWRAKHALWK
Sulfate transporter CysZ
Salmonella paratyphi A (strain AKU_12601)
554,290
253
28,893
Amino-acid biosynthesis;Cell inner membrane;Cell membrane;Cysteine biosynthesis;Membrane;Sulfate transport;Transmembrane;Transmembrane helix;Transport
GO:0000103; GO:0005886; GO:0009675; GO:0019344
Inferred from homology
2
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_00468}; Multi-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_00468}.
null
TRANSMEM 31..51; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00468"; TRANSMEM 72..92; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00468"; TRANSMEM 151..171; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00468"; TRANSMEM 222..242; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00468"
PF07264;
IPR050480;IPR022985;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi A (no rank)
cysZ SSPA0409
false
Salmonella enterica
1,146
row_357691
false
null
16,615
P24670
MKTVTVKNLIIGEGMPKIIVSLMGRDINSVKAEALAYREATFDILEWRVDHFMDIASTQSVLTAARVIRDAMPDIPLLFTFRSAKEGGEQTITTQHYLTLNRAAIDSGLVDMIDLELFTGDADVKATVDYAHAHNVYVVMSNHDFHQTPSAEEMVLRLRKMQALGADIPKIAVMPQSKHDVLTLLTATLEMQQHYADRPVITMSMAKEGVISRLAGEVFGSAATFGAVKQASAPGQIAVNDLRSVLMILHNA
3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type I DHQase) (Type I dehydroquinase) (DHQ1)
Salmonella typhi
90,370
252
27,649
3D-structure;Amino-acid biosynthesis;Aromatic amino acid biosynthesis;Lyase;Schiff base
GO:0003855; GO:0008652; GO:0009073; GO:0009423; GO:0046279
Evidence at protein level
5
null
null
null
PF01487;
IPR018508;IPR013785;IPR001381;IPR050146;
1GQN;1L9W;1QFE;4CLM;4CNN;4CNO;4CNP;4UIO;6H5C;6H5D;6H5G;6H5J;6SFE;6SFG;8B2B;8B2C;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
aroD STY1760 t1231
false
Salmonella enterica
1,147
row_14246
false
null
23,977
P58687
MKTVTVRDLVVGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKASAPGQISVADLRTVLTILHQA
3-dehydroquinate dehydratase (3-dehydroquinase) (DHQD) (EC 4.2.1.10) (Type I DHQase) (Type I dehydroquinase) (DHQ1)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
252
27,325
3D-structure;Amino-acid biosynthesis;Aromatic amino acid biosynthesis;Lyase;Reference proteome;Schiff base
GO:0003855; GO:0008652; GO:0009073; GO:0009423; GO:0046279
Evidence at protein level
5
null
null
null
PF01487;
IPR018508;IPR013785;IPR001381;IPR050146;
3L2I;3LB0;3M7W;3NNT;3O1N;3OEX;3S42;4GFS;4GUF;4GUG;4GUH;4GUI;4GUJ;4IUO;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
aroD STM1358
false
Salmonella enterica
1,148
row_20841
false
null
98,520
Q8Z6H0
MERVLIVNADDFGLSKGQNYGIVEAYRNGVVTSTTALVNGEAIDHAAQLSRELPALGVGMHFVLTLGKPVSEMPGLTRDGLLGKWIWQMAEEDTLPLDEIAHELACQYQRFIDVFGREPTHLDSHHHVHMFPQIFPIVARFAAQRGIALRIDRQTVLNADDLPSDLRSTQGFSSEFYGEEITEACFLRILDASAHRGEASLEVMCHPAFVDNIIRQSAYCYPRLTELEVLTSASLKAGIAERVYRPGSFLDI
Chitooligosaccharide deacetylase (COD) (EC 3.5.1.105) (Chitin disaccharide deacetylase) (Chitobiose deacetylase) (Chitobiose-6P deacetylase) (Chitotriose deacetylase) (Chitotriose-6P deacetylase)
Salmonella typhi
90,370
252
28,055
Carbohydrate metabolism;Chitin degradation;Cytoplasm;Hydrolase;Magnesium;Metal-binding;Polysaccharide degradation
GO:0000272; GO:0005737; GO:0006032; GO:0019213; GO:0036311; GO:0046872; GO:0052777
Inferred from homology
4
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01246}.
null
null
PF04794;
IPR022948;IPR011330;IPR006879;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
chbG STY1796 t1196
false
Salmonella enterica
1,149
row_87689
false
null
253,596
Q57IZ2
MDKLQNIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEERVITWIGNGADVLMERALTWAREERATLRKTMGKPPVDEDIPAEEQVRILRKLFDRYYGEVAEEGTFLFPHVADTLGALNASGLSLGLVTNKPTPFVAPLLESLDIAKYFSVVIGGDDVQNKKPHPEPLLLVASRLGMMPEQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGEAIALSEPDVIYDSFNDLLPALGLPHSDNQEIKND
Phosphoglycolate phosphatase (PGP) (PGPase) (EC 3.1.3.18)
Salmonella choleraesuis (strain SC-B67)
321,314
252
27,328
Carbohydrate metabolism;Chloride;Hydrolase;Magnesium;Metal-binding
GO:0005829; GO:0005975; GO:0006281; GO:0008967; GO:0046295; GO:0046872
Inferred from homology
3
null
null
null
PF13419;
IPR050155;IPR036412;IPR006439;IPR041492;IPR023214;IPR023198;IPR037512;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella enterica subsp. enterica serovar Choleraesuis (no rank)
SCH_3414
false
Salmonella enterica
1,150
row_238686
false
null
259,676
Q5PD68
MLSATQPVSENLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQERIRKSEALTAHNTGLTLNIAANYGGRWDIVQGVRQLAEQVQAGVLRPDQIDEERLGQQICMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTEPGDDKA
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) (EC 2.5.1.31) (Ditrans,polycis-undecaprenylcistransferase) (Undecaprenyl diphosphate synthase) (UDS) (Undecaprenyl pyrophosphate synthase) (UPP synthase)
Salmonella paratyphi A (strain ATCC 9150 / SARB42)
295,319
252
28,328
Cell shape;Cell wall biogenesis/degradation;Magnesium;Metal-binding;Peptidoglycan synthesis;Transferase
GO:0000287; GO:0005829; GO:0008360; GO:0008834; GO:0009252; GO:0016094; GO:0071555
Inferred from homology
3
null
null
null
PF01255;
IPR001441;IPR018520;IPR036424;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi A (no rank)
uppS SPA0228
false
Salmonella enterica
1,151
row_244611
false
null
353,957
A9MJB7
MMLHAQNMPGQSGMPWLVFLHGFSGDCREWQPVGEQFHTCSRLYIDLPGHGGSAAIPVGGFADVFQLLRATLISYNILKFWLVGYSLGGRVAMMAACQGIPGLCGLVVEGGHPGLQNEQARAERRLSDGRWAERFRREPLSTVFHDWYQQSVFTSLTAQQRQALTALRSQNNGETLAAMLEATSLAAQPDLREALNALTFPFYYLCGERDSKFRALAQEVAATCHVIRNAGHNAHRENPAGVVDSLAQILRL
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (SHCHC synthase) (EC 4.2.99.20)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
252
27,798
Lyase;Menaquinone biosynthesis;Reference proteome
GO:0009234; GO:0070205
Inferred from homology
2
null
null
null
PF12697;
IPR000073;IPR029058;IPR022485;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
menH SARI_00591
false
Salmonella enterica
1,152
row_337004
false
null
354,213
A9MU21
MQICLMDETGATDGALSVLAARWGLEHDEDNPMALVLTPQYLELRKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLTRGYADADIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMFPHRQKSALVKKEMRVFQSLVGPDLDADGLLEPARQLATKRVVVKRPDYAPPLADVATPNAIVTKGHRFDIYAGTPLTE
Ribosomal RNA small subunit methyltransferase J (EC 2.1.1.242) (16S rRNA m2G1516 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase)
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
252
27,308
Cytoplasm;Methyltransferase;rRNA processing;S-adenosyl-L-methionine;Transferase
GO:0005737; GO:0008990
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01523}.
null
null
PF04445;
IPR007536;IPR029063;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
rsmJ yhiQ SPAB_04461
false
Salmonella enterica
1,153
row_337258
false
null
419,847
P41786
MIRRYLYTFLLVMTLAGCKDKDLLKGLDQEQANEVIAVLQMHNIEANKIDSGKLGYSITVAEPDFTAAVYWIKTYQLPPRPRVEIAQMFPADSLVSSPRAEKARLYSAIEQRLEQSLQTMEGVLSARVHISYDIDAGENGRPPKPVHLSALAVYERGSPLAHQISDIKRFLKNSFADVDYDNISVVLSERSDAQLQAPGTPVKRNSFATSWIVLIILLSVMSAGFGVWYYKNHYARNKKGITADDKAKSSNE
Lipoprotein PrgK
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
252
28,210
3D-structure;Cell outer membrane;Lipoprotein;Membrane;Palmitate;Protein transport;Reference proteome;Signal;Transmembrane;Transmembrane helix;Transport;Virulence
GO:0009279; GO:0009306
Evidence at protein level
2
SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000305}; Lipid-anchor {ECO:0000305}.
SIGNAL 1..17; /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
TRANSMEM 207..227; /note="Helical"; /evidence="ECO:0000255"
PF01514;
IPR045851;IPR006182;IPR003282;IPR043427;
2Y9J;3J6D;4OYC;4W4M;5TCP;5TCR;6DUZ;6PEM;6Q14;6Q15;6Q16;6UOT;6UOV;7AH9;7AHI;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
prgK STM2871
false
Salmonella enterica
1,154
row_402031
false
null
98,599
Q8ZRM2
MNLNSIPAFQDNYIWVLTNDEGRCVIVDPGEAAPVLKAIAEHKWMPEAIFLTHHHHDHVGGVKELLQHFPQMTVYGPAETQDKGATHLVGDGDTIRVLGEKFTLFATPGHTLGHVCYFSRPYLFCGDTLFSGGCGRLFEGTPSQMYQSLMKINSLPDDTLICCAHEYTLANIKFALSILPHDSFINEYYRKVKELRVKKQMTLPVILKNERKINLFLRTEDIDLINEINKETILQQPEARFAWLRSKKDTF
Hydroxyacylglutathione hydrolase (EC 3.1.2.6) (Glyoxalase II) (Glx II)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
251
28,633
3D-structure;Hydrolase;Metal-binding;Reference proteome;Zinc
GO:0004416; GO:0019243; GO:0046872
Evidence at protein level
4
null
null
null
PF16123;PF00753;
IPR035680;IPR050110;IPR032282;IPR017782;IPR001279;IPR036866;
2QED;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
gloB STM0261
false
Salmonella enterica
1,155
row_87765
false
null
140,467
A9MIY3
MVEDSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMSFGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRMVGETGKVILADINDSMLKMGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTEKEKALRSMFRVLKPGGRLLVLEFSKPIIEPLSKAYDAYSFHILPRIGLMVANDADSYRYLAESIRMHPDQDTLKVMMQDAGFESVDYYNLTAGVVALHRGYKF
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE (EC 2.1.1.163) (EC 2.1.1.201) (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase) (Demethylmenaquinone methyltransferase)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
251
28,190
Menaquinone biosynthesis;Methyltransferase;Reference proteome;S-adenosyl-L-methionine;Transferase;Ubiquinone biosynthesis
GO:0008425; GO:0009060; GO:0009234; GO:0032259; GO:0043770
Inferred from homology
3
null
null
null
PF01209;
IPR029063;IPR004033;IPR023576;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
ubiE SARI_03687
false
Salmonella enterica
1,156
row_128348
false
null
140,828
A9N2I4
MAAHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIIHSQPTHAVAVFDDDARSSGWRHQRLPDYKAGRPPMPDDLHNEMPALRAAFEQRGVRCWASDGNEADDLAATLALKVTEAGHQATIVSTDKGYCQLLSPGLRIRDYFQKRWLDAPFIEKEFGVLPRQLPDYWGLAGISSSKVPGVAGIGPKSATQLLIQFQNLEGIYAHLDEVPEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRLAR
Flap endonuclease Xni (FEN) (EC 3.1.-.-)
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
251
28,150
DNA-binding;Endonuclease;Hydrolase;Magnesium;Metal-binding;Nuclease;Potassium
GO:0000287; GO:0003677; GO:0008409; GO:0017108; GO:0030955; GO:0033567
Inferred from homology
3
null
null
null
PF01367;PF02739;
IPR020046;IPR002421;IPR036279;IPR020045;IPR038969;IPR008918;IPR029060;IPR022895;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
xni ygdG SPAB_03696
false
Salmonella enterica
1,157
row_128707
false
null
197,635
P26219
MKKTGYFLLAVIVIVAAAGVGYWKFSGNPDALREIVLEQCLPDQLQHQNPAPCAEVKPRAGYVVFKDRHGPLQYLLMPTYRINGTESPLLLEPATPNFFWLAWQARGYMSKKYGHDIPDSAVSLAINSRLGRSQDHLHIHISCIRPDVREQLDNDLTRISTRWLPLPGGLMGHEYLARRVTESELAQRSPFMMLAEEVPEARDHMGRYALAVVRQSDDSFVLLATERNLLTFNRASAEEIQDHSCAILSSR
CDP-diacylglycerol pyrophosphatase (EC 3.6.1.26) (CDP-diacylglycerol phosphatidylhydrolase) (CDP-diglyceride hydrolase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
251
28,368
Cell inner membrane;Cell membrane;Hydrolase;Lipid biosynthesis;Lipid metabolism;Membrane;Phospholipid biosynthesis;Phospholipid metabolism;Reference proteome;Transmembrane;Transmembrane helix
GO:0005886; GO:0008654; GO:0008715; GO:0046342
Inferred from homology
3
SUBCELLULAR LOCATION: Cell inner membrane; Single-pass membrane protein.
null
TRANSMEM 5..25; /note="Helical"; /evidence="ECO:0000255"
PF02611;
IPR003763;IPR015993;IPR036265;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
cdh ushB STM4064
false
Salmonella enterica
1,158
row_184260
false
null
253,725
Q57NA5
MTSLVSLENVSVSFGQRRVLSDVSLELSPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNGQLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTQKTDILPALKRVQAGHLIDAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNHHICCSGAPEVVSMHPEFISMFGPRGAEQLGIYRHHHNHRHDLQGRIVLRRGNGHS
Zinc import ATP-binding protein ZnuC (EC 7.2.2.20)
Salmonella choleraesuis (strain SC-B67)
321,314
251
27,685
ATP-binding;Cell inner membrane;Cell membrane;Ion transport;Membrane;Nucleotide-binding;Translocase;Transport;Zinc;Zinc transport
GO:0005524; GO:0005886; GO:0010043; GO:0015633; GO:0016887
Inferred from homology
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_01725}; Peripheral membrane protein {ECO:0000255|HAMAP-Rule:MF_01725}.
null
null
PF00005;
IPR003593;IPR003439;IPR050153;IPR027417;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella enterica subsp. enterica serovar Choleraesuis (no rank)
znuC SCH_1900
false
Salmonella enterica
1,159
row_238814
false
null
353,868
A9MFM3
MTEAQRHQILLDMLAQLGFVTVENVIERLGISPATARRDINKLDESGKLKKVRNGAEAITQQRPRWTPMNLHQAQNHDEKVRIAKAASQLVNPGESVVINCGSTAFLLGREMCGKPVQIITNYLPLANYLIDQEHESVIIMGGQYNKSQSITLSPQGSENSLYAGHWMFTSGKGLTADGLYKTDMLTAMAEQKMLSVVGKLVALVDSSKIGERAGMLFSRADQIDMLITGKNANPEVLQQLEAQGVSILRV
HTH-type transcriptional regulator UlaR
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
251
27,546
Cytoplasm;DNA-binding;Reference proteome;Repressor;Transcription;Transcription regulation
GO:0003677; GO:0003700; GO:0005737; GO:0045892
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01563}.
null
null
PF00455;PF08220;
IPR050313;IPR014036;IPR001034;IPR037171;IPR018356;IPR023711;IPR036388;IPR036390;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
ulaR SARI_03253
false
Salmonella enterica
1,160
row_336915
false
null
415,368
P16323
MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVDGLSLATRTLVTASTPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGHPVIGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGLFRLTAEAQAERGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLLSMS
Flagellar basal-body rod protein FlgF (Putative proximal rod protein)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
251
26,102
3D-structure;Bacterial flagellum;Direct protein sequencing;Reference proteome
GO:0009288; GO:0009425; GO:0071978
Evidence at protein level
2
SUBCELLULAR LOCATION: Bacterial flagellum basal body.
null
null
PF00460;PF06429;PF22692;
IPR001444;IPR019776;IPR020013;IPR010930;IPR037925;IPR053967;
7BIN;7CBM;7CGO;7E80;7E82;8WK3;8WKK;8WL2;8WLH;8WLQ;8WLT;8WO5;8WOE;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
flgF fla FVI flaX STM1178
false
Salmonella enterica
1,161
row_397678
false
null
425,178
P62539
MAEIAVINHKKRKNSPRIVQSNELTEAAYSLSRDQKRLLYLFVHQIRKSDGSLQEHDGICEIHVAKYAETFGLTSAEASKDIRQALKGFAGKEVVFYRPEEDAGDEKGYESFPWFIKRAHSPSRGLYSVHINPYLIPFFIGLQNRFTQFRLSETKEITNPYAMRLYESLCQYRKPDGSGVVSLKIDWIMERYQLPQSYQRMPDFRRRFLKASVDEINSRTPMRLSYIEKKKGRQTTHIVFSFRDITSMTIE
Replication initiation protein (Protein E) (Protein rep)
Salmonella typhi
90,370
251
29,378
DNA replication;Plasmid;Plasmid copy control
GO:0003887; GO:0006270; GO:0006276
Inferred from homology
2
null
null
null
PF21205;PF01051;
IPR000525;IPR036388;IPR036390;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
repE rep HCM1.137
false
Salmonella enterica
1,162
row_407281
false
null
514,713
Q8ZQQ6
MAQVNKQAIAAAFGRAASQYEQHASLQQHSADALLTLLTGRQFASVLDAGCGPGRMSRYWRERGSEVTALDLSLPMLQQARDRQAAHHYLLADIEAIPHDAEVFDLAWSNLAVQWCGDLRDALSELYRVVRPGGVVAFTTLCQGSLPELRQAWQAVDNRAHANSFLPEEAIDHALRGWRAFRHTQAMTLWFEDALSAMRSLKGIGATHLHEGRESDVLTRARLRQIQLAWPQRQGKYPLTYHLFMGVIERD
Malonyl-[acyl-carrier protein] O-methyltransferase (Malonyl-ACP O-methyltransferase) (EC 2.1.1.197) (Biotin synthesis protein BioC)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
251
28,209
Biotin biosynthesis;Methyltransferase;Reference proteome;S-adenosyl-L-methionine;Transferase
GO:0008168; GO:0008757; GO:0009102; GO:0010340; GO:0032259; GO:0102130
Inferred from homology
2
null
null
null
PF08241;
IPR011814;IPR013216;IPR029063;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
bioC STM0796
false
Salmonella enterica
1,163
row_495240
false
null
72,062
P0A2T8
MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENSDALAALAGHTRNVA
Fumarate and nitrate reduction regulatory protein
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
250
27,883
4Fe-4S;Activator;Cytoplasm;DNA-binding;Iron;Iron-sulfur;Metal-binding;Reference proteome;Repressor;Transcription;Transcription regulation
GO:0000976; GO:0001216; GO:0003700; GO:0005829; GO:0032993; GO:0045893; GO:0046872; GO:0051539
Inferred from homology
4
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}.
null
null
PF00027;PF13545;
IPR000595;IPR018490;IPR050397;IPR012318;IPR014710;IPR018335;IPR036388;IPR036390;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
fnr oxrA STM1660
false
Salmonella enterica
1,164
row_62953
false
null
94,076
Q7CQM9
MWTGVNMDSSKRQFLQQLGVLTAGASLVPLAEAKFPFSPERHEGSPRHRYAMLIDLRRCIGCQSCTVSCTIENQTPQGAFRTTVNQYQVQREGSQEVTNVLLPRLCNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDARFINHETQTADKCTFCVHRLEAGLLPACVESCVGGARIIGDIKDPHSRIATMLHQHRDAIKVLKPENGTSPHVFYLGLDDAFVTPLMGRAQPALWQEV
Tetrathionate reductase subunit B (Tetrathionate reductase electron transport protein)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
250
27,710
4Fe-4S;Cell inner membrane;Cell membrane;Electron transport;Iron;Iron-sulfur;Membrane;Metal-binding;Periplasm;Reference proteome;Repeat;Signal;Transport
GO:0005886; GO:0042597; GO:0046872; GO:0051539
Evidence at protein level
4
SUBCELLULAR LOCATION: Periplasm {ECO:0000269|PubMed:10231485}. Cell inner membrane {ECO:0000305|PubMed:10231485}; Peripheral membrane protein {ECO:0000305|PubMed:10231485}; Periplasmic side {ECO:0000305|PubMed:10231485}.
SIGNAL 1..33; /note="Tat-type signal"; /evidence="ECO:0000255|PROSITE-ProRule:PRU00648"
null
PF13247;
IPR017896;IPR017900;IPR054822;IPR050954;IPR006311;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
ttrB STM1385
false
Salmonella enterica
1,165
row_83571
false
null
140,654
A9MTL3
MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGFSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNDTILPRMKSGERVIIAAHGNSLRALVKYLDNMSEDEILELNIPTGVPLVYEFDENFKPLKHYYLGNADEIAAKAAAVANQGKAK
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (BPG-dependent PGAM) (PGAM) (Phosphoglyceromutase) (dPGM) (EC 5.4.2.11)
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
1,016,998
250
28,493
Gluconeogenesis;Glycolysis;Isomerase
GO:0004619; GO:0006094; GO:0006096
Inferred from homology
3
null
null
null
PF00300;
IPR013078;IPR029033;IPR001345;IPR005952;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi B (no rank)
gpmA SPAB_02750
false
Salmonella enterica
1,166
row_128534
false
null
417,223
P26976
MKSRYLVFFLPLIVAKYTSAETVQPFHSPEESVNSQFYLPPPPGNDDPAYRYDKEAYFKGYAIKGSPRWKQAAEDADVSVENIARIFSPVVGAKINPKDTPETWNMLKNLLTMGGYYATASAKKYYMRTRPFVLFNHSTCRPEDENTLRKNGSYPSGHTAYGTLLALVLSEARPERAQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQTIPAFQKSLAKVREELNDKNNLLSKEDHPKLNY
Non-specific acid phosphatase (NSAP) (EC 3.1.3.2)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
250
28,382
Hydrolase;Periplasm;Reference proteome;Signal
GO:0003993; GO:0030288
Inferred from homology
2
SUBCELLULAR LOCATION: Periplasm.
SIGNAL 1..20; /evidence="ECO:0000255"
null
PF01569;
IPR001011;IPR018296;IPR036938;IPR000326;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
phoN STM4319
false
Salmonella enterica
1,167
row_399474
false
null
514,062
Q8Z292
MAILGLQGVRGGVGTTSLTAALAWALQILGENVLVIDASPDNLLRMSFNVDFVHQGGWARSLLDGQDWRDAGLRYTSQLDLLPFGQLTSQEWENPQAWQETLGEIGSAIQALKASGRYSWILLDLPYGESPLTRQLVSLCDHTLAIAQVDANCHIRLHQQALPAGAHILINDLRIGSQLQDDLYQVWLQSQRRLLPIVIHRDEAMAECMASKQPLGEYRSDSLAAEEVLTLANWCLLHDAGDKTSAGSLR
Cellulose biosynthesis protein BcsQ
Salmonella typhi
90,370
250
27,517
ATP-binding;Cytoplasm;Nucleotide-binding
GO:0005524; GO:0005829; GO:0009898; GO:0016887; GO:0051782
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}. Note=Localizes at the cell pole. {ECO:0000250}.
null
null
PF06564;
IPR017746;IPR027417;IPR050625;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
bcsQ STY4180 t3897
false
Salmonella enterica
1,168
row_494598
false
null
157,165
B4TGI0
MSQLMQLKDVAESTRLGPLSGEVSAGEILHLVGPNGAGKSTLLARMAGLTSGEGSIRFGGAPLEAWATATLAQHRAYLAQQQNPPFAMPVWHYLTLHQPDKTRTGQLNEVADMLGLGDKLGRSVNQLSGGEWQRVRLAAVVLQIHPDANPVGQLLLLDEPMNSLDVAQQNALDRVLHHLCQAGIAIVMSSHDLNHTLRHAHKAWLLKRGKLIACGRREEVLTPSYLAQAYGLRFRRLDVEGHPMLISAT
Vitamin B12 import ATP-binding protein BtuD (EC 7.6.2.8) (Vitamin B12-transporting ATPase)
Salmonella heidelberg (strain SL476)
454,169
249
27,109
ATP-binding;Cell inner membrane;Cell membrane;Membrane;Nucleotide-binding;Translocase;Transport
GO:0005524; GO:0005886; GO:0015420; GO:0016887
Inferred from homology
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_01005}; Peripheral membrane protein {ECO:0000255|HAMAP-Rule:MF_01005}.
null
null
PF00005;
IPR003593;IPR003439;IPR017871;IPR023693;IPR050153;IPR027417;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella enterica subsp. enterica serovar Heidelberg (no rank)
btuD SeHA_C1470
false
Salmonella enterica
1,169
row_144682
false
null
178,961
D0ZWT5
MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILIGYFCLRRRF
Secretion system apparatus lipoprotein SsaJ
Salmonella typhimurium (strain 14028s / SGSC 2262)
588,858
249
28,521
Cell outer membrane;Lipoprotein;Membrane;Palmitate;Protein transport;Signal;Transmembrane;Transmembrane helix;Transport
GO:0009279; GO:0009306
Inferred from homology
3
SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000305}; Lipid-anchor {ECO:0000255|PROSITE-ProRule:PRU00303}.
SIGNAL 1..18; /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
TRANSMEM 225..245; /note="Helical"; /evidence="ECO:0000255"
PF01514;
IPR045851;IPR006182;IPR003282;IPR043427;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank), Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (strain)
ssaJ STM14_1705
false
Salmonella enterica
1,170
row_166195
false
null
252,998
Q56067
MAELSDQEMLRYNRQIILRGFDFEGQEALKDARVLVVGLGGLGCAATQYLAGAGVGQLTLLDFDTVSVSNLQRQTLHSDATVGQPKVESARDALARINPHITITPVNARLDDDAMTSLIAGHSLVLDCTDNVSVRNQLNAGCYTAKVPLISGAAIRMEGQVTVFTYRENEPCYRCLSRLFGENALTCVEAGVMAPLIGVIGSLQAMEAIKLLAHYGQPASGKIVMYDAMTCQFREMKLMRNPGCEVCGQ
Molybdopterin-synthase adenylyltransferase (EC 2.7.7.80) (MoaD protein adenylase) (Molybdopterin-converting factor subunit 1 adenylase) (Sulfur carrier protein MoaD adenylyltransferase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
249
26,903
ATP-binding;Metal-binding;Molybdenum cofactor biosynthesis;Nucleotide-binding;Nucleotidyltransferase;Reference proteome;Transferase;Zinc
GO:0004792; GO:0005524; GO:0005737; GO:0005829; GO:0006777; GO:0008146; GO:0008641; GO:0016779; GO:0046872; GO:0061605
Inferred from homology
3
null
null
null
PF00899;
IPR012730;IPR045886;IPR000594;IPR035985;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
moeB STM0845
false
Salmonella enterica
1,171
row_238099
false
null
209,030
P69935
MIVLVTGATAGFGECIARRFVENGHKVIATGRRHERLQALKDELGENVLTAQLDVRNRAAIEEMMASLPAQWRDIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLIYMTRAVLPGMVERNRGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSSVRFKGDDEKAGKTYENTTALTPEDITEAVWWVATLPAHVNINTVEMMPVTQSFAGLSVHRS
NADP-dependent 3-hydroxy acid dehydrogenase YdfG (L-allo-threonine dehydrogenase) (EC 1.1.1.381) (Malonic semialdehyde reductase) (EC 1.1.1.298)
Salmonella typhi
90,370
248
27,043
NADP;Oxidoreductase
GO:0005829; GO:0035527
Inferred from homology
3
null
null
null
PF00106;
IPR036291;IPR020904;IPR002347;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
ydfG STY1550 t1432
false
Salmonella enterica
1,172
row_195431
false
null
298,114
Q8Z800
MSFVVIIPARFSSTRLPGKPLVDINGKPMIVHVLERARESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCGFTDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVGMATLAVPIHSAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKSLETVGDTCLRHLGIYGYRAGFIRRYVSWQPSPLEHIEMLEQLRVLWYGEKIHVAVAKAVPGTGVDTADDLERVRAEMR
3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) (CMP-2-keto-3-deoxyoctulosonic acid synthase) (CKS) (CMP-KDO synthase)
Salmonella typhi
90,370
248
27,446
Cytoplasm;Lipopolysaccharide biosynthesis;Nucleotidyltransferase;Transferase
GO:0005829; GO:0008690; GO:0009103; GO:0033468
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00057}.
null
null
PF02348;
IPR003329;IPR004528;IPR029044;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
kdsB STY0990 t1946
false
Salmonella enterica
1,173
row_282010
false
null
140,533
A9MLS7
MSKLFWATLSFISRLPVPSRWAQGLDFEQYSRGIVMFPLIGAILGGLSGLIFILLQPWCGIPLAALFCILALALLTGGFHLDGLADTCDGIFSARRRERMLEIMRDSRLGTHGGLALIFVLLAKILVVSELALRGTPVLAALAAACAAGRGSAALLMYRHRYAREEGLGNVFIGKVSGRQTCVTLGLAAIITTVLLPGMQGLAAIVITLAAIFILGQLLKRTLGGQTGDTLGAAIELGELIFLLALL
Adenosylcobinamide-GDP ribazoletransferase (EC 2.7.8.26) (Cobalamin synthase) (Cobalamin-5'-phosphate synthase)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
247
26,171
Cell inner membrane;Cell membrane;Cobalamin biosynthesis;Magnesium;Membrane;Reference proteome;Transferase;Transmembrane;Transmembrane helix
GO:0005886; GO:0008818; GO:0009236; GO:0051073
Inferred from homology
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_00719}; Multi-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_00719}.
null
TRANSMEM 34..54; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00719"; TRANSMEM 59..79; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00719"; TRANSMEM 113..133; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00719"; TRANSMEM 138..158; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00719"; TRANSMEM 194..214; /note="Helical"; /evidence="ECO:0000255|HAMAP-Rule:MF_00719"
PF02654;
IPR003805;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
cobS SARI_00871
false
Salmonella enterica
1,174
row_128414
false
null
178,951
D0ZLR2
MQQINFYRQRVAINVLAKDIANAKAIYEAAEGHAVIGVLSAQFATVEEGVPEVKRWMAEVPSISVGLGAGDPAQYYKAAMIAAHTHPAHVNQTFTGSGFAAGALAATGGEQTHINALVSPTGTPGEVVISTGVSSSQGTPARVSCEAAVRMMQDMGAHAAKFFPMGGEKSLPELYALATTAARHGMTLIEPTGGISLDNFGIILQTCLEAGVPRVMPHVYSSIIDPQTGNTRPEDIIRLMEIVKALV
2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) (Keto-3-deoxygluconate 6-phosphate aldolase) (KDGP aldolase)
Salmonella typhimurium (strain 14028s / SGSC 2262)
588,858
247
25,896
Lyase
GO:0008675
Evidence at protein level
3
null
null
null
PF07071;
IPR013785;IPR010763;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank), Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (strain)
dgaF STM14_4543
false
Salmonella enterica
1,175
row_166185
false
null
276,811
Q7CQC4
MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPNTQVYDLGCSLGAATLSVRRNIRHEHCRIIAVDNSPAMIERCRRHIDAYKAPTPVEVVEGDIRDITIENASMVVLNFTLQFLEPAERQALLDKIYLGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLRQAGFEHSELWFQCFNFGSLVALKAGVAA
Carboxy-S-adenosyl-L-methionine synthase (Cx-SAM synthase) (EC 2.1.3.-)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
247
27,848
Reference proteome;S-adenosyl-L-methionine;Transferase
GO:0002098; GO:0016743; GO:1904047
Inferred from homology
3
null
null
null
PF13649;
IPR005271;IPR041698;IPR029063;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
cmoA STM1905
false
Salmonella enterica
1,176
row_261200
false
null
354,073
A9MND4
MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPDANPRLRAAVDKALSNNMTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMVECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMGKVRDALENAGLKADSAEVSMIPSTKADMDAETAPKLLRLIDMLEDCDDVQEVYHNGEISDEVAATLE
Probable transcriptional regulatory protein YebC
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
247
26,563
Cytoplasm;DNA-binding;Reference proteome;Transcription;Transcription regulation
GO:0003677; GO:0005829; GO:0006355
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00693}.
null
null
PF20772;PF01709;
IPR017856;IPR048300;IPR049083;IPR002876;IPR026564;IPR029072;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
yebC SARI_01049
false
Salmonella enterica
1,177
row_337118
false
null
354,124
A9MQA5
MHTQVLFEHPLNEKMRTWLRIEFLIQQLSINLPIADHAGALHFFRNISDLLDVFERGEVRTELLKELERQQRKLQAWVEVPGVDQDRIEALRQQLKSAGSVLISAPRIGQQLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLQQPQRDAQIETWLASLNPLTQALTLVLDLIRNSAPFRKQTSLNGFYQDNGDDADLLRLILTLDSQLYPQISGHKSRFAIRFMPLDSENGLVPERLDFELACC
Cell division protein ZapD (Z ring-associated protein D)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
247
28,448
Cell cycle;Cell division;Cytoplasm;Reference proteome;Septation
GO:0000917; GO:0005737; GO:0032153; GO:0043093
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01092}. Note=Localizes to mid-cell in an FtsZ-dependent manner. {ECO:0000255|HAMAP-Rule:MF_01092}.
null
null
PF07072;
IPR009777;IPR027462;IPR036268;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
zapD SARI_02856
false
Salmonella enterica
1,178
row_337169
false
null
426,884
P67270
MKNTELEQLINDKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLQADAVIVHHGYFWKGESPVIRGMKRRRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVKGEIEPLVPWGELSMPVPGLELASWIEARLGRKPLWCGDTGPENVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTALDVTFIDIPNPA
GTP cyclohydrolase 1 type 2 homolog
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
247
26,946
DNA damage;DNA repair;Metal-binding;Reference proteome
GO:0005737; GO:0006281; GO:0046872
Inferred from homology
2
null
null
null
PF01784;
IPR002678;IPR036069;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
ybgI STM0711
false
Salmonella enterica
1,179
row_408978
false
null
514,214
Q8Z7E3
MSITAKSVYRDAGNFFRNQFITILLVSLLCAFITVVLGHAFSPSDAQIAQLSEGEHLAGSAGLFELVQNMTPEQQQILLRASAASTFSGLIGNAILAGGIILMIQLVSAGHRVSALRAIGASAPALPKLFILIFLTTLLVQIGIMLIVVPGIIMAIVLALAPVMLVEEKMGVFAAMRSSMRLAWANMKLVAPAVIGWLLAKTLLLLFAPSFAVLTPNVGAVLANTLSNLISAVLLIYLFRLYMLIRQ
UPF0259 membrane protein YciC
Salmonella typhi
90,370
247
26,343
Cell inner membrane;Cell membrane;Membrane;Transmembrane;Transmembrane helix
GO:0005886
Inferred from homology
2
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000250}; Multi-pass membrane protein {ECO:0000250}.
null
TRANSMEM 20..40; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 87..107; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 118..140; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 152..172; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 194..214; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 219..239; /note="Helical"; /evidence="ECO:0000255"
PF06790;
IPR009627;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
yciC STY1317 t1646
false
Salmonella enterica
1,180
row_494747
false
null
197,652
P26264
MLEQVCQLARNAGDAIMQVYDGAKPMEYARKQDDSPVTAADIAAHTVILEGLRTLTPDIPVLSEEDPPAWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIEQGKPVLGVVYAPVLKVMYYAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHTDDELTEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTSVWDTAAGHAIAVAAGAHVHDWQGKTLDYTPRESFLNPGFRVTIY
3'(2'),5'-bisphosphate nucleotidase CysQ (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (3'-phosphoadenosine 5'-phosphate phosphatase) (PAP phosphatase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
246
27,490
Cell inner membrane;Cell membrane;Hydrolase;Magnesium;Membrane;Metal-binding;Reference proteome
GO:0000103; GO:0000287; GO:0005886; GO:0008441; GO:0046854; GO:0050427
Evidence at transcript level
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_02095}; Peripheral membrane protein {ECO:0000255|HAMAP-Rule:MF_02095}; Cytoplasmic side {ECO:0000255|HAMAP-Rule:MF_02095}.
null
null
PF00459;
IPR006240;IPR050725;IPR020583;IPR000760;IPR020550;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
cysQ STM4404
false
Salmonella enterica
1,181
row_184276
false
null
353,952
A9MJ15
MTNNAAAPLYSLRGLPLIGWRDMPHALNYLFADGQLKQGTLVAINAEKLLTAEDNPDVRALIAAAEFKYADGISVVRSIRKKFPQAQVSRVAGADLWEALMARAGKEGTPVFLIGGKPEVLAQTEEKLRAQWNVNIVGSQDGYFTPEQSQALFARIHASGAQIVTVAMGSPKQEIVMHDCREVHPHALYMGVGGTYDVFTGHVKRAPKIWQNLGLEWLYRLLSQPSRITRQMRLLRYLRWHYTDDL
UDP-N-acetyl-D-mannosaminuronic acid transferase (UDP-ManNAcA transferase) (EC 2.4.1.180)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
246
27,524
Glycosyltransferase;Reference proteome;Transferase
GO:0009246; GO:0047241
Inferred from homology
2
null
null
null
PF03808;
IPR023085;IPR004629;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
wecG rffM SARI_03724
false
Salmonella enterica
1,182
row_336999
false
null
418,332
P33387
MYILNKFIRRTVIFFFFCYLPIASSESKKIEQPLLTQKYYGLRLGTTRVIYKEDAPSTSFWIMNEKEYPILVQTQVYNDDKSSKAPFIVTPPILKVESNARTRLKVIPTSNLFNKNEESLYWLCVKGVPPLNDNESNNKNNITTNLNVNVVTNSCIKLIYRPKTIDLTTMEIADKLKLERKGNSIVIKNPTSSYVNIANIKSGNLSFNIPNGYIEPFGYAQLPGGVHSKITLTILDDNGAEIIRDY
Chaperone protein SefB
Salmonella enteritidis
149,539
246
28,030
Chaperone;Disulfide bond;Fimbrium biogenesis;Immunoglobulin domain;Periplasm;Signal
GO:0030288; GO:0061077; GO:0071555
Inferred from homology
2
SUBCELLULAR LOCATION: Periplasm {ECO:0000250}.
SIGNAL 1..24; /evidence="ECO:0000255"
null
PF00345;
IPR013783;IPR008962;IPR050643;IPR036316;IPR001829;IPR018046;IPR016147;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies)
sefB
false
Salmonella enterica
1,183
row_400560
false
null
522,190
Q9L6Q3
MSILITRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLADRLATLTENDLVFALSQHAVAFAHAQLQRDGRNWPVAPRYFAIGRTTALALHTVSGFDIRYPLDREISEALLQLPELQNIAGKRALILRGNGGRELLGETLTARGAEVSFCECYQRCAKHYDGAEEAMRWHTRGVTTLVVTSGEMLQRLWSLTPQWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDALLRALQ
Uroporphyrinogen-III synthase (UROS) (EC 4.2.1.75) (Hydroxymethylbilane hydrolyase [cyclizing]) (Uroporphyrinogen-III cosynthase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
246
27,662
Lyase;Porphyrin biosynthesis;Reference proteome
GO:0004852; GO:0006780; GO:0006782
Inferred from homology
2
null
null
null
PF02602;
IPR036108;IPR003754;IPR039793;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
hemD STM3937 STMD1.54
false
Salmonella enterica
1,184
row_502606
false
null
156,968
B4T6V0
MTFTASSSSCAITESPVVVALDYHERDKALAFVDKIDPRDCRLKVGKEMFTLFGPQLVRDLQQRGFDVFLDLKFHDIPNTTARAVAAAADLGVWMVNVHASGGARMMAAARDALAPFGKDAPLLIAVTVLTSMETSDLHDLGVTLSPAEHAERLARLTQQCGLDGVVCSAQEAVRFKQVFGAAFKLVTPGIRPAGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKDINASLKREA
Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
Salmonella newport (strain SL254)
423,368
245
26,326
Decarboxylase;Lyase;Pyrimidine biosynthesis
GO:0004590; GO:0005829; GO:0006207; GO:0044205
Inferred from homology
3
null
null
null
PF00215;
IPR013785;IPR014732;IPR018089;IPR047596;IPR001754;IPR011060;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella newport (no rank)
pyrF SNSL254_A1831
false
Salmonella enterica
1,185
row_144486
false
null
190,220
P0A257
MLYIFRLIVTVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGRLAPLFGLKVECRKPADAENYGNAIYIANHQNNYDMVTAANIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRAKAHSTIAAVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSNTSNKVNLNRLNNGLVIVEMLPPVDVSEYGKDQVRELAAHCRALMEQKIAELDKEVAEREATGKV
1-acyl-sn-glycerol-3-phosphate acyltransferase (1-AGP acyltransferase) (1-AGPAT) (EC 2.3.1.51) (Lysophosphatidic acid acyltransferase) (LPAAT)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
245
27,339
Acyltransferase;Cell inner membrane;Cell membrane;Lipid biosynthesis;Lipid metabolism;Membrane;Phospholipid biosynthesis;Phospholipid metabolism;Reference proteome;Transferase
GO:0003841; GO:0005886; GO:0006654; GO:0016024
Inferred from homology
3
SUBCELLULAR LOCATION: Cell inner membrane; Peripheral membrane protein.
null
null
PF01553;
IPR004552;IPR002123;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
plsC parF STM3173
false
Salmonella enterica
1,186
row_177067
false
null
204,625
P54700
MRRLLFLSLAGLWLFSPAAAAQLPGLISQPLAGGGQSWSLSVQTLVFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVIDKIYVDAYQPFSEQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSGPLQGPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLMGSLAQSFYS
Flagellar biosynthetic protein FliP
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
245
26,787
3D-structure;Bacterial flagellum;Bacterial flagellum biogenesis;Bacterial flagellum protein export;Cell inner membrane;Cell membrane;Direct protein sequencing;Membrane;Protein transport;Reference proteome;Signal;Transmembrane;Transmembrane helix;Transport
GO:0005886; GO:0009306; GO:0009425; GO:0044780; GO:0071978
Evidence at protein level
3
SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body.
SIGNAL 1..21; /evidence="ECO:0000269|PubMed:9324257"
TRANSMEM 45..65; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 88..108; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 185..205; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 209..229; /note="Helical"; /evidence="ECO:0000255"
PF00813;
IPR005837;IPR005838;
6F2D;7BIN;7CG4;7CGO;7E80;8WK3;8WKK;8WKQ;8WL2;8WLH;8WLN;8WLQ;8WLT;8WO5;8WOE;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
fliP flaR STM1979
false
Salmonella enterica
1,187
row_191087
false
null
215,708
Q05594
MKLEQQLRQLSFSGLAAALLLMVVPQQAFAMHIMEGFLPPVWALAWWLLFLPCLWYGLVRLRRIVQEDNHQKVLLALCGAFIFVLSALKIPSVTGSCSHPTGVGLAVILFGPGVVAILGAVVLLFQALLLAHGGLTTLGANGMSMAVIGPVVGYLVWKMACRAGLRRDVAVFLCAMLADLATYFVTSVQLGVAFPDPHAGATGSVVKFMGIFCLTQIPVAIAEGLLTVMIYDQLTKRQVITVQGH
Cobalt transport protein CbiM (Energy-coupling factor transporter probable substrate-capture protein CbiM) (ECF transporter S component CbiM)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
245
26,299
Cell inner membrane;Cell membrane;Cobalamin biosynthesis;Cobalt;Cobalt transport;Ion transport;Membrane;Reference proteome;Signal;Transmembrane;Transmembrane helix;Transport
GO:0006824; GO:0009236; GO:0015087; GO:0043190
Evidence at protein level
3
SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
SIGNAL 1..30; /evidence="ECO:0000255"
TRANSMEM 36..56; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 73..93; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 105..125; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 137..157; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 169..189; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 210..230; /note="Helical"; /evidence="ECO:0000255"
PF01891;
IPR018024;IPR002751;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
cbiM STM2023
false
Salmonella enterica
1,188
row_201847
false
null
353,899
A9MH26
MYPVDLHMHTVASTHAYSTLSDYIAEAKRKGIKLFAITDHGPDMEDAPHHWHFINMRIWPRLVDGVGILRGIEANIKNINGEIDCSGKMFDSLDLIIAGFHELVFAPHDKETNTQAMIATIASGKVHIISHPGNPKYPVEVKAVAQAAAKHHVALEINNSSFLHSRKGSEDNCRAVAAAVRDAGGWVALGSDSHTAFTLGDFTECRKILDAVDFPEDRILNVSPQRLLSFLESRGMAPVPEFAEL
Probable phosphatase YcdX (EC 3.1.3.-)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
245
26,925
Hydrolase;Metal-binding;Reference proteome;Zinc
GO:0005829; GO:0008270; GO:0016791; GO:0071978
Inferred from homology
2
null
null
null
PF02811;
IPR023710;IPR004013;IPR050243;IPR003141;IPR016195;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
ycdX SARI_01861
false
Salmonella enterica
1,189
row_336946
false
null
354,002
A9ML12
MIIPALDLIDGVVVRLHQGDYARQRDYGNDPLPRLQDYVAQGAEVLHLVDLTGAKDPANRQISLIKTLVAGVNVPVQIGGGVRTEEDVAALLEAGVARVVVGSTAVKSPEVVKGWFERFGAQALVLALDVRIDEHGNKQVAVSGWQENSGISLEQLVETYLPVGLKHVLCTDISRDGTLAGSNVSLYQEVCARYPQIAFQSSGGIGDIDDIAALRGTGVHGVIVGRALLEGKFTVKEAIQCWQNA
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
245
26,157
Amino-acid biosynthesis;Cytoplasm;Histidine biosynthesis;Isomerase;Reference proteome
GO:0000105; GO:0000162; GO:0003949; GO:0005737
Inferred from homology
2
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01014}.
null
null
PF00977;
IPR013785;IPR006062;IPR006063;IPR044524;IPR023016;IPR011060;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
hisA SARI_00808
false
Salmonella enterica
1,190
row_337047
false
null
72,055
P0A2C9
MSFEGKIALVTGASRGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLMLNVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETLHVNGGMYMV
3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase) (Beta-Ketoacyl-acyl carrier protein reductase) (Beta-ketoacyl-ACP reductase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
244
25,545
3D-structure;Calcium;Fatty acid biosynthesis;Fatty acid metabolism;Lipid biosynthesis;Lipid metabolism;Metal-binding;NADP;Oxidoreductase;Reference proteome
GO:0004316; GO:0016616; GO:0030497; GO:0046872; GO:0050661; GO:0051287
Evidence at protein level
4
null
null
null
PF13561;
IPR011284;IPR036291;IPR020904;IPR050259;IPR002347;
6T5X;6T7M;
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
fabG STM1195
false
Salmonella enterica
1,191
row_62946
false
null
98,584
Q8ZP19
MSGYNEQFLKKNPLAILGVLRDLNKNQVPLRISWAHGQFISKILAVDPEKLIVDYGSQEYENSAVLRAGQVAIIAETQGAKVEFTLPQLVTGEYQRLPAFITPLPSSLWFVQRREYFRIGAPLYPPYYGVTTLPDTRTLRFRLFDLSLGGMGALLESAIPDGLIEGARFSQVELNMGQWGIFHVDAQLISISERKVIDGKNETITTPRLSFRFLNVSPAVERELQRIIFSLEREARERANKVRE
Flagellar brake protein YcgR (Cyclic di-GMP binding protein YcgR)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
244
27,668
Bacterial flagellum;c-di-GMP;Nucleotide-binding;Reference proteome
GO:0009425; GO:0035438; GO:0071945; GO:0071973
Evidence at protein level
4
SUBCELLULAR LOCATION: Bacterial flagellum basal body {ECO:0000269|PubMed:20346719}. Note=Localization lost in FliM mutants E-155 or E-160.
null
null
PF07238;PF07317;
IPR009875;IPR012349;IPR023787;IPR009926;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
ycgR STM1798
false
Salmonella enterica
1,192
row_87750
false
null
140,385
A9MF18
MSVLDLNALNDLPKVDRVLALAETNAELEKLVAEERVAWSLENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDALTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALQDLNAQTWFAGLRREQSGSRTSLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWHQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
Phosphoadenosine 5'-phosphosulfate reductase (PAPS reductase) (EC 1.8.4.8) (3'-phosphoadenylylsulfate reductase) (PAPS reductase, thioredoxin dependent) (PAPS sulfotransferase) (PAdoPS reductase)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
244
27,929
Cytoplasm;Oxidoreductase;Reference proteome
GO:0004604; GO:0005737; GO:0019379; GO:0070814
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00063}.
null
null
PF01507;
IPR004511;IPR002500;IPR011800;IPR014729;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
cysH SARI_00016
false
Salmonella enterica
1,193
row_128269
false
null
190,156
P0A1H7
MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQLQLADARSLDQASDIAAGFSAKSLSAQLINEAQNELELSQGSEDNEGIKERTGFRLERRVAAVGRYMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNASASAQPVRAAQKLRVG
Biopolymer transport protein ExbB
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
244
26,179
Bacteriocin transport;Cell inner membrane;Cell membrane;Membrane;Protein transport;Reference proteome;Transmembrane;Transmembrane helix;Transport
GO:0005886; GO:0017038; GO:0022857; GO:0043213
Inferred from homology
3
SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
null
TRANSMEM 21..41; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 133..153; /note="Helical"; /evidence="ECO:0000255"; TRANSMEM 178..198; /note="Helical"; /evidence="ECO:0000255"
PF01618;
IPR050790;IPR002898;IPR014164;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
exbB STM3159
false
Salmonella enterica
1,194
row_177003
false
null
353,964
A9MJN1
MKIDLNADLGEGFASDSELLTLVSSANIACGFHAGDAQTMLTCVREALKNGVAIGAHPSFPDRDNFGRTAMVLPPETVYAQTLYQIGALGAIVQAQGGVMRHVKPHGMLYNQAAKDPRLAQAIAKAVHDYDSSLILVGLAGSELIRAGERYRLATRQEVFADRGYQADGSLVPRTQPGALILDEGQALAQTLGMVQAGRVKSVTGVWTNVTAQTVCIHGDGEYALAFARRLRAAFNARNIHVSF
5-oxoprolinase subunit A (5-OPase subunit A) (EC 3.5.2.9) (5-oxoprolinase (ATP-hydrolyzing) subunit A)
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
41,514
244
26,035
ATP-binding;Hydrolase;Nucleotide-binding;Reference proteome
GO:0005524; GO:0005975; GO:0017168
Inferred from homology
2
null
null
null
PF03746;
IPR011330;IPR005501;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica subsp. arizonae (subspecies)
pxpA SARI_02222
false
Salmonella enterica
1,195
row_337011
false
null
190,152
P0A1G9
MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVINRRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPVFADVVDEFLDYIRGAELVIHNASFDIGFMDYEFGLLKRDIPKTNTFCKVTDSLALARKMFPGKRNSLDALCSRYEIDNSKRTLHGALLDAQILAEVYLAMTGGQTSMTFAMEGETQRQQGEATIQRIVRQASRLRVVFASEEELAAHESRLDLVQKKGGSCLWRA
DNA polymerase III subunit epsilon (EC 2.7.7.7)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
243
27,225
DNA replication;DNA-directed DNA polymerase;Exonuclease;Hydrolase;Magnesium;Manganese;Metal-binding;Nuclease;Nucleotidyltransferase;Reference proteome;Transferase
GO:0003677; GO:0003887; GO:0005829; GO:0008408; GO:0045004; GO:0046872
Inferred from homology
3
null
null
null
PF00929;
IPR006054;IPR006309;IPR013520;IPR012337;IPR036397;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
dnaQ mutD STM0264
false
Salmonella enterica
1,196
row_176999
false
null
208,114
P66974
MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAQIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNDELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGDAADHEETPYPLVDDLERFYGHLEQTLLSTGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGK
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
99,287
243
26,613
Cytoplasm;Methyltransferase;Reference proteome;S-adenosyl-L-methionine;Transferase;tRNA processing
GO:0002128; GO:0003723; GO:0005829; GO:0160206
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:P0AE01}.
null
null
PF00588;
IPR029028;IPR004384;IPR001537;IPR029026;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
trmJ STM2545
false
Salmonella enterica
1,197
row_194536
false
null
244,571
Q3V7K1
MAELLLGVNIDHIATLRNARGTDYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLHTRMNLEMAVTEEMLAIAVETRPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACARLAAAGIQVSLFIDADEAQINAAAEVGAPFIEIHTGCYANAETDAEQAKELARIASAATLAARLGLKVNAGHGLTYHNVKAIAALPEMHELNIGHAIIGRAVMTGLKEAVAEMKRLMLEARG
Pyridoxine 5'-phosphate synthase (PNP synthase) (EC 2.6.99.2)
Salmonella paratyphi A (strain ATCC 9150 / SARB42)
295,319
243
26,313
Cytoplasm;Pyridoxine biosynthesis;Transferase
GO:0005829; GO:0008615; GO:0033856
Inferred from homology
3
SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00279}.
null
null
PF03740;
IPR013785;IPR004569;IPR036130;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella paratyphi A (no rank)
pdxJ SPA0287
false
Salmonella enterica
1,198
row_230042
false
null
401,607
E1WH94
MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNGVQVSKVKVLLSSDSSEQPNGWREQQEILLHYLQSSNLHSLRLWVKERGQDYPAQTLTTNLFVPLRRRLQCQQPALQALLGILDGILINYIALCLASARKKQGKDALVIGWNIHDTTRLWLEGWVASQQGWRIDVLAHSLSQFRPELFDGKTLLVWCGENQTLAQQQQLLAWRAQGRDIHPLGV
HTH-type transcriptional regulator MlrA (MerR-like regulator A)
Salmonella typhimurium (strain SL1344)
216,597
243
27,902
Activator;DNA-binding;Transcription;Transcription regulation
GO:0003677; GO:0003700
Predicted
2
null
null
null
PF13411;PF22267;PF22270;
IPR009061;IPR000551;IPR047057;IPR053987;IPR053988;IPR048225;
null
cellular organisms (no rank), Bacteria (domain), Pseudomonadati (kingdom), Pseudomonadota (phylum), Gammaproteobacteria (class), Enterobacterales (order), Enterobacteriaceae (family), Salmonella (genus), Salmonella enterica (species), Salmonella enterica I (subspecies), Salmonella typhimurium (no rank)
mlrA SL1344_2138
false
Salmonella enterica
1,199
row_384183
false
null