animationInterpolation
/
.venv
/Lib
/site-packages
/networkx
/algorithms
/tests
/test_structuralholes.py
"""Unit tests for the :mod:`networkx.algorithms.structuralholes` module.""" | |
import math | |
import pytest | |
import networkx as nx | |
from networkx.classes.tests import dispatch_interface | |
class TestStructuralHoles: | |
"""Unit tests for computing measures of structural holes. | |
The expected values for these functions were originally computed using the | |
proprietary software `UCINET`_ and the free software `IGraph`_ , and then | |
computed by hand to make sure that the results are correct. | |
.. _UCINET: https://sites.google.com/site/ucinetsoftware/home | |
.. _IGraph: http://igraph.org/ | |
""" | |
def setup_method(self): | |
self.D = nx.DiGraph() | |
self.D.add_edges_from([(0, 1), (0, 2), (1, 0), (2, 1)]) | |
self.D_weights = {(0, 1): 2, (0, 2): 2, (1, 0): 1, (2, 1): 1} | |
# Example from http://www.analytictech.com/connections/v20(1)/holes.htm | |
self.G = nx.Graph() | |
self.G.add_edges_from( | |
[ | |
("A", "B"), | |
("A", "F"), | |
("A", "G"), | |
("A", "E"), | |
("E", "G"), | |
("F", "G"), | |
("B", "G"), | |
("B", "D"), | |
("D", "G"), | |
("G", "C"), | |
] | |
) | |
self.G_weights = { | |
("A", "B"): 2, | |
("A", "F"): 3, | |
("A", "G"): 5, | |
("A", "E"): 2, | |
("E", "G"): 8, | |
("F", "G"): 3, | |
("B", "G"): 4, | |
("B", "D"): 1, | |
("D", "G"): 3, | |
("G", "C"): 10, | |
} | |
# This additionally tests the @nx._dispatchable mechanism, treating | |
# nx.mutual_weight as if it were a re-implementation from another package | |
def test_constraint_directed(self, wrapper): | |
constraint = nx.constraint(wrapper(self.D)) | |
assert constraint[0] == pytest.approx(1.003, abs=1e-3) | |
assert constraint[1] == pytest.approx(1.003, abs=1e-3) | |
assert constraint[2] == pytest.approx(1.389, abs=1e-3) | |
def test_effective_size_directed(self): | |
effective_size = nx.effective_size(self.D) | |
assert effective_size[0] == pytest.approx(1.167, abs=1e-3) | |
assert effective_size[1] == pytest.approx(1.167, abs=1e-3) | |
assert effective_size[2] == pytest.approx(1, abs=1e-3) | |
def test_constraint_weighted_directed(self): | |
D = self.D.copy() | |
nx.set_edge_attributes(D, self.D_weights, "weight") | |
constraint = nx.constraint(D, weight="weight") | |
assert constraint[0] == pytest.approx(0.840, abs=1e-3) | |
assert constraint[1] == pytest.approx(1.143, abs=1e-3) | |
assert constraint[2] == pytest.approx(1.378, abs=1e-3) | |
def test_effective_size_weighted_directed(self): | |
D = self.D.copy() | |
nx.set_edge_attributes(D, self.D_weights, "weight") | |
effective_size = nx.effective_size(D, weight="weight") | |
assert effective_size[0] == pytest.approx(1.567, abs=1e-3) | |
assert effective_size[1] == pytest.approx(1.083, abs=1e-3) | |
assert effective_size[2] == pytest.approx(1, abs=1e-3) | |
def test_constraint_undirected(self): | |
constraint = nx.constraint(self.G) | |
assert constraint["G"] == pytest.approx(0.400, abs=1e-3) | |
assert constraint["A"] == pytest.approx(0.595, abs=1e-3) | |
assert constraint["C"] == pytest.approx(1, abs=1e-3) | |
def test_effective_size_undirected_borgatti(self): | |
effective_size = nx.effective_size(self.G) | |
assert effective_size["G"] == pytest.approx(4.67, abs=1e-2) | |
assert effective_size["A"] == pytest.approx(2.50, abs=1e-2) | |
assert effective_size["C"] == pytest.approx(1, abs=1e-2) | |
def test_effective_size_undirected(self): | |
G = self.G.copy() | |
nx.set_edge_attributes(G, 1, "weight") | |
effective_size = nx.effective_size(G, weight="weight") | |
assert effective_size["G"] == pytest.approx(4.67, abs=1e-2) | |
assert effective_size["A"] == pytest.approx(2.50, abs=1e-2) | |
assert effective_size["C"] == pytest.approx(1, abs=1e-2) | |
def test_constraint_weighted_undirected(self): | |
G = self.G.copy() | |
nx.set_edge_attributes(G, self.G_weights, "weight") | |
constraint = nx.constraint(G, weight="weight") | |
assert constraint["G"] == pytest.approx(0.299, abs=1e-3) | |
assert constraint["A"] == pytest.approx(0.795, abs=1e-3) | |
assert constraint["C"] == pytest.approx(1, abs=1e-3) | |
def test_effective_size_weighted_undirected(self): | |
G = self.G.copy() | |
nx.set_edge_attributes(G, self.G_weights, "weight") | |
effective_size = nx.effective_size(G, weight="weight") | |
assert effective_size["G"] == pytest.approx(5.47, abs=1e-2) | |
assert effective_size["A"] == pytest.approx(2.47, abs=1e-2) | |
assert effective_size["C"] == pytest.approx(1, abs=1e-2) | |
def test_constraint_isolated(self): | |
G = self.G.copy() | |
G.add_node(1) | |
constraint = nx.constraint(G) | |
assert math.isnan(constraint[1]) | |
def test_effective_size_isolated(self): | |
G = self.G.copy() | |
G.add_node(1) | |
nx.set_edge_attributes(G, self.G_weights, "weight") | |
effective_size = nx.effective_size(G, weight="weight") | |
assert math.isnan(effective_size[1]) | |
def test_effective_size_borgatti_isolated(self): | |
G = self.G.copy() | |
G.add_node(1) | |
effective_size = nx.effective_size(G) | |
assert math.isnan(effective_size[1]) | |