README.md

clinOracle team - tahoe-hack-2025

Predicting clinical outcomes from in vitro transcriptional responses.

Code

• representations/ - scripts to train and transcriptome effect representations on Tahoe-100M
• clinical_data_curation/ - scripts to curate clinical trial data
• approval_prediction_benchmark.ipynb - benchmark on clinical approval prediction
• classifier.py - Benchmarking classifier implementation

Data

• clinical_evidence_data/ - Curated clinical evidence data on Tahoe drugs
• data_for_classifier/ - input data for benchmarks
• data/ - misc processed data