Daniel Lundin
commited on
Commit
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c657243
1
Parent(s):
a9fd240
Adding CheckM data
Browse files
testdata/checkm.lineage_wf.qa_2.tsv
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Bin Id Marker lineage # genomes # markers # marker sets Completeness Contamination Strain heterogeneity Genome size (bp) # ambiguous bases # scaffolds # contigs N50 (scaffolds) N50 (contigs) Mean scaffold length (bp) Mean contig length (bp) Longest scaffold (bp) Longest contig (bp) GC GC std (scaffolds > 1kbp) Coding density Translation table # predicted genes 0 1 2 3 4 5+
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Bin Id Marker lineage # genomes # markers # marker sets Completeness Contamination Strain heterogeneity Genome size (bp) # ambiguous bases # scaffolds # contigs N50 (scaffolds) N50 (contigs) Mean scaffold length (bp) Mean contig length (bp) Longest scaffold (bp) Longest contig (bp) GC GC std (scaffolds > 1kbp) Coding density Translation table # predicted genes 0 1 2 3 4 5+
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GCA_000022305.1 f__Comamonadaceae (UID4119) 39 693 323 99.93 0.62 0.00 3796573 0 1 1 3796573 3796573 3796573 3796573 3796573 3796573 66.8 0.00 89.96 11 3526 2 687 4 0 0 0
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GCA_002688505.1 k__Bacteria (UID2495) 2993 136 80 77.08 0.00 0.00 271175 2 1 1 271175 271173 271175 271173 271175 271173 15.4 0.00 89.63 4 257 20 116 0 0 0 0
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