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--- |
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dataset_info: |
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features: |
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- name: text |
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dtype: string |
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splits: |
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- name: train |
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num_bytes: 24317303773 |
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num_examples: 520535 |
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download_size: 12927183654 |
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dataset_size: 24317303773 |
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configs: |
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- config_name: default |
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data_files: |
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- split: train |
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path: data/train-* |
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license: cc |
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pretty_name: PubMed Central (PMC) Open Access in Markdown |
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--- |
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# PubMed Central (PMC) Open Access in Markdown |
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This is a subset filtered for the words: obesity, weight loss, and diabetes. |
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The purpose of this extraction is to further research in Biomedicine + NLP. While there are many biomedical datasets, most of them focus on the clinical space, which is often different from the early developments and discovery. |
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The Markdown format includes figure description, tables, and a YAML header with some metadata like original license. It is filtered to remove Non-Derivative licenses as you cannot modify or remix the data for other purposes. |
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This used the 2025-06-26 snapshot from https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_bulk/oa_comm/xml/ |
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You can recreate this dataset by using this package: https://github.com/casper-hansen/pmc-python |
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