var shell = require('./phylo-node_pipes');

// execute multiple commands in series
shell.chain([
    //enter all the commands in series in this array 
    //separated by a comma and inside quotes
    'node ../Sequences/index.js NM_001028053.2 AF032112.1 NM_001129696.2',
    'node index_2.js NM_001028053.2.fasta'
], function (err) {
    console.log('\n' + 'multiple commands successfully piped' + '\n');
});
@@ -212,21 +212,19 @@
 quences/
-index
+app
 .js NM_0
@@ -276,13 +276,11 @@
 ode 
-index
+app
 _2.j
@@ -397,8 +397,9 @@
 n');%0A%7D);
+%0A

Update pipe_example.js