/*
 * Licensed to the Apache Software Foundation (ASF) under one or more
 * contributor license agreements.  See the NOTICE file distributed with
 * this work for additional information regarding copyright ownership.
 * The ASF licenses this file to You under the Apache License, Version 2.0
 * (the "License"); you may not use this file except in compliance with
 * the License.  You may obtain a copy of the License at
 *
 *      http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */
package org.apache.pdfbox.io;

import java.io.File;
import java.io.FileNotFoundException;
import java.io.IOException;
import java.io.InputStream;
import java.io.RandomAccessFile;
import java.util.LinkedHashMap;

/**
 * Provides {@link InputStream} access to portions of a file combined with
 * buffered reading of content. Start of next bytes to read can be set via seek method.
 * 
 * File is accessed via {@link RandomAccessFile} and is read in byte chunks which are
 * cached.
 * 
 * @author Timo Boehme (timo.boehme at ontochem com)
 */
public class RandomAccessBufferedFileInputStream extends InputStream implements RandomAccessRead
{

		private int  pageSizeShift  = 12;
		private int  pageSize       = 1 << pageSizeShift;
		private long pageOffsetMask = -1L << pageSizeShift;
		private int  maxCachedPages = 1000;
	
		private byte[] lastRemovedCachePage = null;
	
		/** Create a LRU page cache. */
		private final LinkedHashMap<Long,byte[]> pageCache = new LinkedHashMap<Long, byte[]>( maxCachedPages, 0.75f, true ) 
		{
				private static final long serialVersionUID = -6302488539257741101L;

				@Override
				protected boolean removeEldestEntry( java.util.Map.Entry<Long, byte[]> _eldest )
				{
						final boolean doRemove = size() > maxCachedPages;
						if ( doRemove )
							lastRemovedCachePage = _eldest.getValue();
						return doRemove;
				}
		};
	
		private long   curPageOffset    = -1;
		private byte[] curPage          = new byte[ pageSize ];
		private int    offsetWithinPage = 0;
	
		private final RandomAccessFile raFile;
		private final long             fileLength;
		private long                   fileOffset = 0;
	
		// ------------------------------------------------------------------------
		/** Create input stream instance for given file. */
		public RandomAccessBufferedFileInputStream( File _file )
		throws FileNotFoundException, IOException
		{
				raFile     = new RandomAccessFile( _file, "r" );
				fileLength = _file.length();
		
				seek( 0 );
		}
	
		// ------------------------------------------------------------------------
		/** Returns offset in file at which next byte would be read. */
		public final long getFilePointer()
		{
				return fileOffset;
		}
	
		// ------------------------------------------------------------------------
		/** Seeks to new position. If new position is outside of current page
		 *  the new page is either taken from cache or read from file and added to cache. */
		public final void seek( final long newOffset ) throws IOException
		{
				final long newPageOffset = newOffset & pageOffsetMask;
				if ( newPageOffset != curPageOffset )
				{
						byte[] newPage = pageCache.get( newPageOffset );
						if ( newPage == null )
						{
								raFile.seek( newPageOffset );
								newPage = readPage();
								pageCache.put( newPageOffset, newPage );
						}
						curPageOffset = newPageOffset;
						curPage       = newPage;
				}
		
				offsetWithinPage = (int) (newOffset - curPageOffset);
				fileOffset       = newOffset;
		}
	
		// ------------------------------------------------------------------------
		/** Reads a page with data from current file position. If we have a previously
		 *  removed page from cache the buffer of this page is reused. Otherwise a new
		 *  byte buffer is created. */
		private final byte[] readPage() throws IOException
		{
				byte[] page;
		
				if ( lastRemovedCachePage != null )
				{
						page = lastRemovedCachePage;
						lastRemovedCachePage = null;
				} else
					page = new byte[ pageSize ];
		
				int readBytes = 0;
				while ( readBytes < pageSize )
				{
						int curBytesRead = raFile.read( page, readBytes, pageSize - readBytes );
						if ( curBytesRead < 0 )
								// EOF
								break;
						readBytes += curBytesRead;
				}
		
				return page;
		}
	
	// ------------------------------------------------------------------------
	@Override
	public int read() throws IOException
	{
		if ( fileOffset >= fileLength )
		{
				return -1;
		}
		
		if ( offsetWithinPage == pageSize )
		{
				seek( fileOffset );
		}

		fileOffset++;
		return curPage[ offsetWithinPage++ ] & 0xff;
	}

	// ------------------------------------------------------------------------
	@Override
	public int read( byte[] b, int off, int len ) throws IOException
	{	
			if ( fileOffset >= fileLength )
			{
					return -1;
			}
			
			if ( offsetWithinPage == pageSize ) 
			{
					seek( fileOffset );
			}
	
			int commonLen = Math.min( pageSize - offsetWithinPage, len );
			if ( ( fileLength - fileOffset ) < pageSize )
					commonLen = Math.min( commonLen, (int) ( fileLength - fileOffset ) );
			
			System.arraycopy( curPage, offsetWithinPage, b, off, commonLen );
			
			offsetWithinPage += commonLen;
			fileOffset       += commonLen;
			
			return commonLen;
	}
	
	// ------------------------------------------------------------------------
	@Override
	public int available() throws IOException
	{
			return (int) Math.min( fileLength - fileOffset, Integer.MAX_VALUE );
	}
	
	// ------------------------------------------------------------------------
	@Override
	public long skip( long n ) throws IOException
	{	
			// test if we have to reduce skip count because of EOF
			long toSkip = n;
			
			if ( fileLength - fileOffset < toSkip )
					toSkip = fileLength - fileOffset;
			
			if ( ( toSkip < pageSize ) && ( ( offsetWithinPage + toSkip ) <= pageSize ) )
			{
					// we can skip within current page
					offsetWithinPage += toSkip;
				  fileOffset       += toSkip;
			}
			else
			{
					// seek to the page we will get after skipping
					seek( fileOffset + toSkip );
			}
			
			return toSkip;
	}
	
	// ------------------------------------------------------------------------
	public long length() throws IOException 
	{
			return fileLength;
	}
	
	// ------------------------------------------------------------------------
	@Override
	public void close() throws IOException
	{
			raFile.close();
			pageCache.clear();
	}
}

@@ -2944,22 +2944,16 @@
 %09public 
-final 
 long get
@@ -3245,22 +3245,16 @@
 %09public 
-final 
 void see

allow sub-classing of public methods in RandomAccessBufferedFileInputStream which was introduced in PDFBOX-1199