@@ -0,0 +1,3123 @@
+/*%0A * #%25L%0A * ImageJ software for multidimensional image processing and analysis.%0A * %25%25%0A * Copyright (C) 2009 - 2013 Board of Regents of the University of%0A * Wisconsin-Madison, Broad Institute of MIT and Harvard, and Max Planck%0A * Institute of Molecular Cell Biology and Genetics.%0A * %25%25%0A * Redistribution and use in source and binary forms, with or without%0A * modification, are permitted provided that the following conditions are met:%0A * %0A * 1. Redistributions of source code must retain the above copyright notice,%0A *    this list of conditions and the following disclaimer.%0A * 2. Redistributions in binary form must reproduce the above copyright notice,%0A *    this list of conditions and the following disclaimer in the documentation%0A *    and/or other materials provided with the distribution.%0A * %0A * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS %22AS IS%22%0A * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE%0A * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE%0A * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE%0A * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR%0A * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF%0A * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS%0A * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN%0A * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)%0A * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE%0A * POSSIBILITY OF SUCH DAMAGE.%0A * %0A * The views and conclusions contained in the software and documentation are%0A * those of the authors and should not be interpreted as representing official%0A * policies, either expressed or implied, of any organization.%0A * #L%25%0A */%0A%0Apackage imagej.core.commands.binary;%0A%0Aimport imagej.command.Command;%0Aimport imagej.data.Dataset;%0Aimport imagej.menu.MenuConstants;%0Aimport net.imglib2.img.Img;%0Aimport net.imglib2.ops.operation.randomaccessibleinterval.unary.morph.Dilate;%0Aimport net.imglib2.ops.operation.randomaccessibleinterval.unary.morph.Erode;%0Aimport net.imglib2.type.logic.BitType;%0A%0Aimport org.scijava.plugin.Menu;%0Aimport org.scijava.plugin.Plugin;%0A%0A/**%0A * Does a morphological open operation on a binary image. Input data is changed%0A * in place.%0A * %0A * @author Barry DeZonia%0A */%0A@Plugin(type = Command.class, menu = %7B%0A%09@Menu(label = MenuConstants.PROCESS_LABEL,%0A%09%09weight = MenuConstants.PROCESS_WEIGHT,%0A%09%09mnemonic = MenuConstants.PROCESS_MNEMONIC),%0A%09@Menu(label = %22Binary%22, mnemonic = 'b'), @Menu(label = %22Open%22) %7D,%0A%09headless = true)%0Apublic class OpenBinaryImage extends AbstractBinaryCommand %7B%0A%0A%09@Override%0A%09protected void updateDataset(Dataset ds) %7B%0A%09%09Erode opErode = new Erode(getConnectedType(), 1);%0A%09%09Dilate%3CImg%3CBitType%3E%3E opDilate =%0A%09%09%09new Dilate%3CImg%3CBitType%3E%3E(getConnectedType(), 1);%0A%09%09Dataset copy = ds.duplicate();%0A%09%09Img%3CBitType%3E copyData = (Img%3CBitType%3E) copy.getImgPlus();%0A%09%09Img%3CBitType%3E origData = (Img%3CBitType%3E) ds.getImgPlus();%0A%09%09opErode.compute(origData, copyData);%0A%09%09opDilate.compute(copyData, origData);%0A%09%7D%0A%0A%7D%0A

Add morphological open command