/*
 * #%L
 * ImageJ software for multidimensional image processing and analysis.
 * %%
 * Copyright (C) 2009 - 2013 Board of Regents of the University of
 * Wisconsin-Madison, Broad Institute of MIT and Harvard, and Max Planck
 * Institute of Molecular Cell Biology and Genetics.
 * %%
 * Redistribution and use in source and binary forms, with or without
 * modification, are permitted provided that the following conditions are met:
 * 
 * 1. Redistributions of source code must retain the above copyright notice,
 *    this list of conditions and the following disclaimer.
 * 2. Redistributions in binary form must reproduce the above copyright notice,
 *    this list of conditions and the following disclaimer in the documentation
 *    and/or other materials provided with the distribution.
 * 
 * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
 * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
 * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
 * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
 * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
 * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
 * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
 * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
 * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
 * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
 * POSSIBILITY OF SUCH DAMAGE.
 * 
 * The views and conclusions contained in the software and documentation are
 * those of the authors and should not be interpreted as representing official
 * policies, either expressed or implied, of any organization.
 * #L%
 */

package imagej.core.commands.io;

import imagej.command.Command;
import imagej.command.ContextCommand;
import imagej.data.Dataset;
import imagej.data.DatasetService;
import imagej.display.Display;
import imagej.menu.MenuConstants;
import imagej.ui.DialogPrompt;
import imagej.ui.DialogPrompt.Result;
import imagej.ui.UIService;
import imagej.widget.FileWidget;
import io.scif.img.ImgSaver;

import java.io.File;
import java.io.IOException;

import net.imglib2.img.ImgPlus;

import org.scijava.ItemIO;
import org.scijava.log.LogService;
import org.scijava.plugin.Menu;
import org.scijava.plugin.Parameter;
import org.scijava.plugin.Plugin;

/**
 * Saves the current {@link Dataset} to disk using a user-specified file name.
 * 
 * @author Mark Hiner
 */
@Plugin(type = Command.class, menu = {
	@Menu(label = MenuConstants.FILE_LABEL, weight = MenuConstants.FILE_WEIGHT,
		mnemonic = MenuConstants.FILE_MNEMONIC),
	@Menu(label = "Save As...", weight = 21) })
public class SaveAsImage extends ContextCommand {

	@Parameter
	private LogService log;

	@Parameter
	private DatasetService datasetService;

	@Parameter
	private UIService uiService;

	@Parameter(label = "File to save", style = FileWidget.SAVE_STYLE,
		initializer = "initOutputFile", persist = false)
	private File outputFile;

	@Parameter
	private Dataset dataset;

	@Parameter(type = ItemIO.BOTH)
	private Display<?> display;

	public void initOutputFile() {
		outputFile = new File(dataset.getImgPlus().getSource());
	}

	@Override
	public void run() {
		if (outputFile.exists()) {
			final Result result =
				uiService.showDialog("\"" + outputFile.getName() +
					"\" already exists. Do you want to replace it?", "Save",
					DialogPrompt.MessageType.WARNING_MESSAGE,
					DialogPrompt.OptionType.YES_NO_OPTION);
			if (result != DialogPrompt.Result.YES_OPTION) return; // abort
		}

		// FIXME: Hacky stuff for XYZCT hysterical raisins.
		// Remove once SCIFIO's ImgSaver is fully N-dimensional.
		final ImgSaver imageSaver = new ImgSaver();
		imageSaver.setContext(getContext());
		try {
			@SuppressWarnings("rawtypes")
			final ImgPlus img = dataset.getImgPlus();
			if (imageSaver.isCompressible(img)) {
				final Result result =
					uiService.showDialog("Your image contains axes other than XYZCT.\n"
						+ "When saving, these may be compressed to the "
						+ "Channel axis (or the save process may simply fail).\n"
						+ "Would you like to continue?", "Save",
						DialogPrompt.MessageType.WARNING_MESSAGE,
						DialogPrompt.OptionType.YES_NO_OPTION);
				if (result != DialogPrompt.Result.YES_OPTION) return; // abort
			}

			datasetService.save(dataset, outputFile.getAbsolutePath());
		}
		catch (final IOException exc) {
			log.error(exc);
			uiService.showDialog(exc.getMessage(), "IJ2: Save Error",
				DialogPrompt.MessageType.ERROR_MESSAGE);
			return;
		}

		display.setName(dataset.getName());
	}

}

@@ -2183,37 +2183,8 @@
 get;
-%0Aimport io.scif.img.ImgSaver;
 %0A%0Aim
@@ -2235,41 +2235,8 @@
 n;%0A%0A
-import net.imglib2.img.ImgPlus;%0A%0A
 impo
@@ -3609,765 +3609,15 @@
 %09%09%7D%0A
-%0A%09%09// FIXME: Hacky stuff for XYZCT hysterical raisins.%0A%09%09// Remove once SCIFIO's ImgSaver is fully N-dimensional.%0A%09%09final ImgSaver imageSaver = new ImgSaver();%0A%09%09imageSaver.setContext(getContext());%0A%09%09try %7B%0A%09%09%09@SuppressWarnings(%22rawtypes%22)%0A%09%09%09final ImgPlus img = dataset.getImgPlus();%0A%09%09%09if (imageSaver.isCompressible(img)) %7B%0A%09%09%09%09final Result result =%0A%09%09%09%09%09uiService.showDialog(%22Your image contains axes other than XYZCT.%5Cn%22%0A%09%09%09%09%09%09+ %22When saving, these may be compressed to the %22%0A%09%09%09%09%09%09+ %22Channel axis (or the save process may simply fail).%5Cn%22%0A%09%09%09%09%09%09+ %22Would you like to continue?%22, %22Save%22,%0A%09%09%09%09%09%09DialogPrompt.MessageType.WARNING_MESSAGE,%0A%09%09%09%09%09%09DialogPrompt.OptionType.YES_NO_OPTION);%0A%09%09%09%09if (result != DialogPrompt.Result.YES_OPTION) return; // abort%0A%09%09%09%7D%0A
+%09%09try %7B
 %0A%09%09%09

remove hacky 5D logic