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Expressivity of 185delAG in these families varied , from early - onset breast cancer without ovarian cancer .
[ { "name": "breast cancer", "pos": [ 71, 84 ], "type": "Disease" }, { "name": "ovarian cancer", "pos": [ 93, 107 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Mutation 4184delTCAA occurred independently in two families .
[]
ncbi
[ "Disease" ]
In one family , penetrance was complete , with females developing early - onset breast cancer or ovarian cancer and the male carrier developing prostatic cancer , whereas , in the other family , penetrance was incomplete and only breast cancer occurred , diagnosed at ages 38 - 81 years .
[ { "name": "breast cancer", "pos": [ 80, 93 ], "type": "Disease" }, { "name": "ovarian cancer", "pos": [ 97, 111 ], "type": "Disease" }, { "name": "prostatic cancer", "pos": [ 144, 160 ], "type": "Disease" }, { "name": "breast cancer", "pos": [ 230, 243 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Two novel nonsense mutations led to the loss of mutant BRCA1 transcript in families with 10 and 6 cases of early - onset breast cancer and ovarian cancer .
[ { "name": "breast cancer", "pos": [ 121, 134 ], "type": "Disease" }, { "name": "ovarian cancer", "pos": [ 139, 153 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
A 665 - nt segment of the BRCA1 3 - UTR and 1 .
[]
ncbi
[ "Disease" ]
3 kb of genomic sequence including the putative promoter region were invariant by single - strand conformation analysis in 13 families without coding - sequence mutations .
[]
ncbi
[ "Disease" ]
Overall in our series , BRCA1 mutations have been detected in 26 families 16 with positive BRCA1 lod scores , 7 with negative lod scores ( reflecting multiple sporadic breast cancers ) , and 3 not tested for linkage .
[ { "name": "breast cancers", "pos": [ 168, 182 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Three other families have positive lod scores for linkage to BRCA2 , but 13 families without detected BRCA1 mutations have negative lod scores for both BRCA1 and BRCA2 .
[]
ncbi
[ "Disease" ]
A new glucose - 6 - phosphate dehydrogenase variant , G6PD Orissa ( 44 Ala - - > Gly ) , is the major polymorphic variant in tribal populations in India .
[]
ncbi
[ "Disease" ]
Deficiency of glucose - 6 - phosphate dehydrogenase ( G6PD ) is usually found at high frequencies in areas of the world where malaria has been endemic .
[ { "name": "Deficiency of glucose - 6 - phosphate dehydrogenase", "pos": [ 0, 51 ], "type": "Disease" }, { "name": "malaria", "pos": [ 126, 133 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
The frequency and genetic basis of G6PD deficiency have been studied in Africa , around the Mediterranean , and in the Far East , but little such information is available about the situation in India .
[ { "name": "G6PD deficiency", "pos": [ 35, 50 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
To determine the extent of heterogeneity of G6PD , we have studied several different Indian populations by screening for G6PD deficiency , followed by molecular analysis of deficient alleles .
[ { "name": "G6PD deficiency", "pos": [ 121, 136 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
The frequency of G6PD deficiency varies between 3 % and 15 % in different tribal and urban groups .
[ { "name": "G6PD deficiency", "pos": [ 17, 32 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Remarkably , a previously unreported deficient variant , G6PD Orissa ( 44 Ala - - > Gly ) , is responsible for most of the G6PD deficiency in tribal Indian populations but is not found in urban populations , where most of the G6PD deficiency is due to the G6PD Mediterranean ( 188 Ser - - > Phe ) variant .
[ { "name": "G6PD deficiency", "pos": [ 123, 138 ], "type": "Disease" }, { "name": "G6PD deficiency", "pos": [ 226, 241 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
The KmNADP of G6PD Orissa is fivefold higher than that of the normal enzyme .
[]
ncbi
[ "Disease" ]
This may be due to the fact that the alanine residue that is replaced by glycine is part of a putative coenzyme - binding site . .
[]
ncbi
[ "Disease" ]
Evidence for linkage of bipolar disorder to chromosome 18 with a parent - of - origin effect .
[ { "name": "bipolar disorder", "pos": [ 24, 40 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
A susceptibility gene on chromosome 18 and a parent - of - origin effect have been suggested for bipolar affective disorder ( BPAD ) .
[ { "name": "bipolar affective disorder", "pos": [ 97, 123 ], "type": "Disease" }, { "name": "BPAD", "pos": [ 126, 130 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
We have studied 28 nuclear families selected for apparent unilineal transmission of the BPAD phenotype , by using 31 polymorphic markers spanning chromosome 18 .
[ { "name": "BPAD", "pos": [ 88, 92 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Evidence for linkage was tested with affected - sib - pair and LOD score methods under two definitions of the affected phenotype .
[]
ncbi
[ "Disease" ]
The affected - sibpair analyses indicated excess allele sharing for markers on 18p within the region reported previously .
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ncbi
[ "Disease" ]
The greatest sharing was at D18S37 64 % in bipolar and recurrent unipolar ( RUP ) sib pairs ( P = . 0006 ) .
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ncbi
[ "Disease" ]
In addition , excess sharing of the paternally , but not maternally , transmitted alleles was observed at three markers on 18q at D18S41 , 51 bipolar and RUP sib pairs were concordant for paternally transmitted alleles , and 21 pairs were discordant ( P = 0004 ) .
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ncbi
[ "Disease" ]
The evidence for linkage to loci on both 18p and 18q was strongest in the 11 paternal pedigrees , i .
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ncbi
[ "Disease" ]
e e . , those in which the father or one of the fathers sibs is affected .
[]
ncbi
[ "Disease" ]
In these pedigrees , the greatest allele sharing ( 81 % ; P = . 00002 ) and the highest LOD score ( 3 . 51 ; phi = 0 . 0 ) were observed at D18S41 .
[]
ncbi
[ "Disease" ]
Our results provide further support for linkage of BPAD to chromosome 18 and the first molecular evidence for a parent - of - origin effect operating in this disorder .
[ { "name": "BPAD", "pos": [ 51, 55 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
The number of loci involved , and their precise location , require further study
[]
ncbi
[ "Disease" ]
A prevalent mutation for galactosemia among black Americans .
[ { "name": "galactosemia", "pos": [ 25, 37 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
OBJECTIVE To define the mutation causing galactosemia in patients of black American origin who have no galactose - 1 - phosphate uridyltransferase ( GALT ) activity in erythrocytes but good clinical outcome .
[ { "name": "galactosemia", "pos": [ 41, 53 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
METHODS We discovered a mutation caused by a C - - > T transition at base - pair 1158 of the GALT gene that results in a serine - to - leucine substitution at codon 135 ( S135L ) .
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ncbi
[ "Disease" ]
We developed a method with which to screen populations for its prevalence .
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ncbi
[ "Disease" ]
We compared galactose - 1 - phosphate uridyltransferase among erythrocytes , leukocytes , and transformed lymphoblasts , as well as total body oxidation of D - ( 13C ) - galactose to 13CO2 among three genotypes for GALT ( S135L / S135L , Q188R / Q188R , and Normal / Normal ) .
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ncbi
[ "Disease" ]
RESULTS We found a 48 % prevalence of the S135L mutation among 17 black American patients with classic galactosemia and a 1 % prevalence in a population of 50 black Americans without galactosemia .
[ { "name": "classic galactosemia", "pos": [ 95, 115 ], "type": "Disease" }, { "name": "galactosemia", "pos": [ 183, 195 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
The S135L mutation was not found in 84 white patients with G / G galactosemia nor in 87 white control subjects without galactosemia .
[ { "name": "galactosemia", "pos": [ 65, 77 ], "type": "Disease" }, { "name": "galactosemia", "pos": [ 119, 131 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
We found normal whole body oxidation of D - ( 13C ) - galactose by the patient homozygous for S135L and various degrees of enzyme impairment among different tissues .
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ncbi
[ "Disease" ]
CONCLUSIONS The S135L mutation in the GALT gene is a prevalent cause of galactosemia among black patients .
[ { "name": "galactosemia", "pos": [ 72, 84 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Because GALT activity varies in different tissues of patients homozygous for S135L , they may have a better clinical outcome than patients who are homozygous for Q188R when both are treated from infancy . .
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ncbi
[ "Disease" ]
A high incidence of BRCA1 mutations in 20 breast - ovarian cancer families .
[ { "name": "breast - ovarian cancer", "pos": [ 42, 65 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
We have analyzed 20 breast - ovarian cancer families , the majority of which show positive evidence of linkage to chromosome 17q12 for germ - line mutations in the BRCA1 gene .
[ { "name": "breast - ovarian cancer", "pos": [ 20, 43 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
BRCA1 mutations cosegregating with breast and ovarian cancer susceptibility were identified in 16 families , including 1 family with a case of male breast cancer .
[ { "name": "breast and ovarian cancer", "pos": [ 35, 60 ], "type": "Disease" }, { "name": "male breast cancer", "pos": [ 143, 161 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Nine of these mutations have not been reported previously .
[]
ncbi
[ "Disease" ]
The majority of mutations were found to generate a premature stop codon leading to the formation of a truncated BRCA1 protein of 2 % - 88 % of the expected normal length .
[]
ncbi
[ "Disease" ]
Two mutations altered the RING finger domain .
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ncbi
[ "Disease" ]
Sequencing of genomic DNA led to the identification of a mutation in the coding region of BRCA1 in 12 families , and cDNA analysis revealed an abnormal or missing BRCA1 transcript in 4 of the 8 remaining families .
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ncbi
[ "Disease" ]
A total of eight mutations were associated with a reduced quantity of BRCA1 transcript .
[]
ncbi
[ "Disease" ]
We were unable to detect BRCA1 mutations in 4 of the 20 families , but only 1 of these was clearly linked to BRCA1 .
[]
ncbi
[ "Disease" ]
It is expected that the majority of clear examples of the breast - ovarian syndrome will be associated with germ - line mutations in the coding region of BRCA1 . .
[ { "name": "breast - ovarian syndrome", "pos": [ 58, 83 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Brca1 deficiency results in early embryonic lethality characterized by neuroepithelial abnormalities .
[ { "name": "Brca1 deficiency", "pos": [ 0, 16 ], "type": "Disease" }, { "name": "embryonic lethality", "pos": [ 34, 53 ], "type": "Disease" }, { "name": "neuroepithelial abnormalities", "pos": [ 71, 100 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
The breast and ovarian cancer susceptibility gene , BRCA1 , has been cloned and shown to encode a zinc - finger protein of unknown function .
[ { "name": "breast and ovarian cancer", "pos": [ 4, 29 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Mutations in BRCA1 account for at least 80 % of families with both breast and ovarian cancer , as well as some non - familial sporadic ovarian cancers .
[ { "name": "breast and ovarian cancer", "pos": [ 67, 92 ], "type": "Disease" }, { "name": "ovarian cancers", "pos": [ 135, 150 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
The loss of wild - type BRCA1 in tumours of individuals carrying one nonfunctional BRCA1 allele suggests that BRCA1 encodes a tumour suppressor that may inhibit the proliferation of mammary epithelial cells .
[ { "name": "tumours", "pos": [ 33, 40 ], "type": "Disease" }, { "name": "tumour", "pos": [ 126, 132 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
To examine the role of BRCA1 in normal tissue growth and differentiation , and to generate a potential model for the cancer susceptibility associated with loss of BRCA1 function , we have created a mouse line carrying a mutation in one Brca1 allele .
[ { "name": "cancer", "pos": [ 117, 123 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Analysis of mice homozygous for the mutant allele indicate that Brca1 is critical for normal development , as these mice died in utero between 10 and 13 days of gestation ( E10 - E13 ) .
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ncbi
[ "Disease" ]
Abnormalities in Brca1 - deficient embryos were most evident in the neural tube , with 40 % of the embryos presenting with varying degrees of spina bifida and anencephaly .
[ { "name": "Brca1 - deficient", "pos": [ 17, 34 ], "type": "Disease" }, { "name": "spina bifida", "pos": [ 142, 154 ], "type": "Disease" }, { "name": "anencephaly", "pos": [ 159, 170 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
In addition , the neuroepithelium in Brca1 - deficient embryos appeared disorganized , with signs of both rapid proliferation and excessive cell death . .
[ { "name": "Brca1 - deficient", "pos": [ 37, 54 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Identification of mutations in the ALD - gene of 20 families with adrenoleukodystrophy / adrenomyeloneuropathy .
[ { "name": "adrenoleukodystrophy", "pos": [ 66, 86 ], "type": "Disease" }, { "name": "adrenomyeloneuropathy", "pos": [ 89, 110 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Adrenoleukodystrophy ( ALD ) , an X - linked inherited metabolic disorder , is the most frequent inborn peroxisomal disease .
[ { "name": "Adrenoleukodystrophy", "pos": [ 0, 20 ], "type": "Disease" }, { "name": "ALD", "pos": [ 23, 26 ], "type": "Disease" }, { "name": "X - linked inherited metabolic disorder", "pos": [ 34, 73 ], "type": "Disease" }, { "name": "inborn peroxisomal disease", "pos": [ 97, 123 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
It leads to demyelination in the central and peripheral nervous system .
[ { "name": "demyelination in the central and peripheral nervous system", "pos": [ 12, 70 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Defective beta - oxidation of saturated very long chain fatty acids ( VLCFAs ; C22 0 - C26 0 ) in peroxisomes has been shown to lead to an accumulation of VLCFAs in leukoid areas of the central nervous system , peripheral nerves , adrenal gland , and blood .
[]
ncbi
[ "Disease" ]
The ALD gene has been recently identified and encodes a 745 - amino - acid protein .
[ { "name": "ALD", "pos": [ 4, 7 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
We screened patients with adrenoleukodystrophy / adrenomyeloneuropathy ( ALD / AMN ) from 20 kindreds for mutations in the ALD gene .
[ { "name": "adrenoleukodystrophy", "pos": [ 26, 46 ], "type": "Disease" }, { "name": "adrenomyeloneuropathy", "pos": [ 49, 70 ], "type": "Disease" }, { "name": "ALD", "pos": [ 73, 76 ], "type": "Disease" }, { "name": "AMN", "pos": [ 79, 82 ], "type": "Disease" }, { "name": "ALD", "pos": [ 123, 126 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Eleven missense and two nonsense mutations , five deletions , and one insertion were detected by direct sequencing of eight reverse transcribed fragments of the ALD - gene mRNA .
[ { "name": "ALD", "pos": [ 161, 164 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Four mutations could be shown to be de novo .
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ncbi
[ "Disease" ]
All mutations could be confirmed in carriers by sequencing genomic DNA .
[]
ncbi
[ "Disease" ]
No correlation between the type of mutation and the severity of the phenotype could be observed .
[]
ncbi
[ "Disease" ]
The mutations were not detected in the ALD gene of 30 healthy persons . .
[ { "name": "ALD", "pos": [ 39, 42 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
The murine homolog of the human breast and ovarian cancer susceptibility gene Brca1 maps to mouse chromosome 11D .
[ { "name": "breast and ovarian cancer", "pos": [ 32, 57 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
The recently cloned human breast and ovarian cancer susceptibility gene , BRCA1 , is located on human chromosome 17q21 .
[ { "name": "breast and ovarian cancer", "pos": [ 26, 51 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
We have isolated murine genomic clones containing Brca1 as a first step in generating a mouse model for the loss of BRCA1 function .
[]
ncbi
[ "Disease" ]
A mouse genomic library was screened using probes corresponding to exon 11 of the human BRCA1 gene .
[]
ncbi
[ "Disease" ]
Two overlapping mouse clones were identified that hybridized to human BRCA1 exons 9 - 12 .
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ncbi
[ "Disease" ]
Sequence analysis of 1 .
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ncbi
[ "Disease" ]
4 kb of the region of these clones corresponding to part of human exon 11 revealed 72 % nucleic acid identity but only 50 % amino acid identity with the human gene .
[]
ncbi
[ "Disease" ]
The longest of the mouse Brca1 genomic clones maps to chromosome 11D , as determined by two - color fluorescence in situ hybridization .
[]
ncbi
[ "Disease" ]
The synteny to human chromosome 17 was confirmed by cohybridization with the mouse probe for the NF1 - gene .
[]
ncbi
[ "Disease" ]
This comparative study confirms that the relative location of the BRCA1 gene has been conserved between mice and humans .
[]
ncbi
[ "Disease" ]
Atelosteogenesis type II is caused by mutations in the diastrophic dysplasia sulfate - transporter gene ( DTDST ) : evidence for a phenotypic series involving three chondrodysplasias .
[ { "name": "Atelosteogenesis type II", "pos": [ 0, 24 ], "type": "Disease" }, { "name": "diastrophic dysplasia", "pos": [ 55, 76 ], "type": "Disease" }, { "name": "chondrodysplasias", "pos": [ 165, 182 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Atelosteogenesis type II ( AO II ) is a neonatally lethal chondrodysplasia whose clinical and histological characteristics resemble those of another chondrodysplasia , the much less severe diastrophic dysplasia ( DTD ) .
[ { "name": "Atelosteogenesis type II", "pos": [ 0, 24 ], "type": "Disease" }, { "name": "AO II", "pos": [ 27, 32 ], "type": "Disease" }, { "name": "chondrodysplasia", "pos": [ 58, 74 ], "type": "Disease" }, { "name": "chondrodysplasia", "pos": [ 149, 165 ], "type": "Disease" }, { "name": "diastrophic dysplasia", "pos": [ 189, 210 ], "type": "Disease" }, { "name": "DTD", "pos": [ 213, 216 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
The similarity suggests a shared pathogenesis involving lesions in the same biochemical pathway and perhaps the same gene .
[]
ncbi
[ "Disease" ]
DTD is caused by mutations in the recently identified diastrophic dysplasia sulfate - transporter gene ( DTDST ) .
[ { "name": "DTD", "pos": [ 0, 3 ], "type": "Disease" }, { "name": "diastrophic dysplasia", "pos": [ 54, 75 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Here , we report that AOII patients also have DTDST mutations , which lead to defective uptake of inorganic sulfate and insufficient sulfation of macromolecules by patient mesenchymal cells in vitro .
[ { "name": "AOII", "pos": [ 22, 26 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Together with our recent observation that a third even more severe chondrodysplasia , achondrogenesis type IB , is also caused by mutations in DTDST , these results demonstrate a phenotypic series of three chondrodysplasias of increasing severity caused by lesions in a single sulfate - transporter gene .
[ { "name": "chondrodysplasia", "pos": [ 67, 83 ], "type": "Disease" }, { "name": "chondrodysplasias", "pos": [ 206, 223 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
The severity of the phenotype appears to be correlated with the predicted effect of the mutations on the residual activity of the DTDST protein . .
[]
ncbi
[ "Disease" ]
Haplotype and phenotype analysis of six recurrent BRCA1 mutations in 61 families : results of an international study .
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ncbi
[ "Disease" ]
Several BRCA1 mutations have now been found to occur in geographically diverse breast and ovarian cancer families .
[ { "name": "breast and ovarian cancer", "pos": [ 79, 104 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
To investigate mutation origin and mutation - specific phenotypes due to BRCA1 , we constructed a haplotype of nine polymorphic markers within or immediately flanking the BRCA1 locus in a set of 61 breast / ovarian cancer families selected for having one of six recurrent BRCA1 mutations .
[ { "name": "breast / ovarian cancer", "pos": [ 198, 221 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Tests of both mutations and family - specific differences in age at diagnosis were not significant .
[]
ncbi
[ "Disease" ]
A comparison of the six mutations in the relative proportions of cases of breast and ovarian cancer was suggestive of an effect ( P = . 069 ) , with 57 % of women presumed affected because of the 1294 del 40 BRCA1 mutation having ovarian cancer , compared with 14 % of affected women with the splice - site mutation in intron 5 of BRCA1 .
[ { "name": "breast and ovarian cancer", "pos": [ 74, 99 ], "type": "Disease" }, { "name": "ovarian cancer", "pos": [ 230, 244 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
For the BRCA1 mutations studied here , the individual mutations are estimated to have arisen 9 - 170 generations ago .
[]
ncbi
[ "Disease" ]
In general , a high degree of haplotype conservation across the region was observed , with haplotype differences most often due to mutations in the short - tandem - repeat markers , although some likely instances of recombination also were observed .
[]
ncbi
[ "Disease" ]
For several of the instances , there was evidence for multiple , independent , BRCA1 mutational events .
[]
ncbi
[ "Disease" ]
Isolation of the mouse homologue of BRCA1 and genetic mapping to mouse chromosome 11 .
[]
ncbi
[ "Disease" ]
The BRCA1 gene is in large part responsible for hereditary human breast and ovarian cancer .
[ { "name": "hereditary human breast and ovarian cancer", "pos": [ 48, 90 ], "type": "Disease" } ]
ncbi
[ "Disease" ]
Here we report the isolation of the murine Brca1 homologue cDNA clones .
[]
ncbi
[ "Disease" ]
In addition , we identified genomic P1 clones that contain most , if not all , of the mouse Brca1 locus .
[]
ncbi
[ "Disease" ]
DNA sequence analysis revealed that the mouse and human coding regions are 75 % identical at the nucleotide level while the predicted amino acid identity is only 58 % .
[]
ncbi
[ "Disease" ]
A DNA sequence variant in the Brca1 locus was identified and used to map this gene on a ( Mus m . musculus Czech II x C57BL / KsJ ) F1 x C57BL / KsJ intersubspecific backcross to distal mouse chromosome 11 .
[]
ncbi
[ "Disease" ]
The mapping of this gene to a region highly syntenic with human chromosome 17 , coupled with Southern and Northern analyses , confirms that we isolated the murine Brca1 homologue rather than a related RING finger gene .
[]
ncbi
[ "Disease" ]
The isolation of the mouse Brca1 homologue will facilitate the creation of mouse models for germline BRCA1 defects . .
[ { "name": "BRCA1 defects", "pos": [ 101, 114 ], "type": "Disease" } ]
ncbi
[ "Disease" ]