as a developer, I can follow docs to run the reference implmentation, so I can test it out and then contribute improvements or passing test-suites

#user-story
Acceptance Criteria:

Anyone can find documentation at https://github.com/decentralized-identity/decentralized-web-node/tree/main/packages/implementations/javascript , and the result of following the instructions is this software running on the developer's machine

Even better:

This should work:git clone git@github.com:decentralized-identity/decentralized-web-node.git && cd decentralized-web-node
npm i
# -w value corresponds to https://github.com/decentralized-identity/decentralized-web-node/blob/main/packages/implementations/javascript/package.json#L2
npm -w identity-hub start

Inspiration:

https://github.com/textileio/powergate#installation
https://github.com/web3-storage/web3.storage/tree/main/packages#build-and-run-locally

@gobengo yes, you're right, sorry for neglecting the code in this repo - our implementation is here (which we would be willing to donate, per the thinking of the WG): https://github.com/TBD54566975/dwn-sdk-js

ACTION: Will remove janky early prototype and point to other implementations (e.g. https://github.com/TBD54566975/dwn-sdk-js)

@csuwildcat can this be closed?

@csuwildcat following up here. OK to close?


Updated 15 of the translation files so 'maximumSelected' is used instead of 'maximumSelection'

Hi there !
I have updated code and compiled with Grunt according to issue https://github.com/select2/select2/issues/3137.
Please let me know if anything is wrong so I can change the code.
Cheers!
Quentin

I did a quick check and everything looks good, thanks!


Move Badge & CCMenue into own package

as title

Codecov Report

Merging #908 (d65bf8e) into master (be0dfb2) will not change coverage.
The diff coverage is 100.00%.

@@           Coverage Diff           @@
##           master     #908   +/-   ##
=======================================
  Coverage   51.70%   51.70%
=======================================
  Files          80       80
  Lines        6090     6090
=======================================
  Hits         3149     3149
  Misses       2759     2759
  Partials      182      182

Impacted Files
Coverage Δ

server/ccmenu/cc.go
100.00% <100.00%> (ø)

server/store/datastore/build.go
69.60% <100.00%> (ø)

Continue to review full report at Codecov.

Legend - Click here to learn more
Δ = absolute <relative> (impact), ø = not affected, ? = missing data
Powered by Codecov. Last update be0dfb2...d65bf8e. Read the comment docs.


scripts/build.sh fails when using nix setup on ubuntu

What's your CLI version?
main
Description & steps to reproduce
Follow the nix setup steps from the readme and try to run scripts/build.sh on ubuntu from main. The build fails with
ok  	github.com/kurtosis-tech/kurtosis/cli/cli/out	(cached)
  • starting build...
  • loading                                          path=.goreleaser.yml
  • building only for linux/amd64                    reason=single target is enabled
  • skipping validate...
  • loading environment variables
  • getting and validating git state
    • git state                                      commit=9d39fc232e755d48135335c8e83c7ce238929174 branch=bgazzard/experimental-dry-run-visualise current_tag=0.86.12 previous_tag=api/golang/v0.86.11 dirty=true
    • pipe skipped                                   reason=disabled during snapshot mode
  • parsing tag
  • setting defaults
    • DEPRECATED:  brews.tap  should not be used anymore, check https://goreleaser.com/deprecations#brewstap for more info
    • DEPRECATED:  brews.tap  should not be used anymore, check https://goreleaser.com/deprecations#brewstap for more info
  • snapshotting
    • building snapshot...                           version=9d39fc-dirty
  • running before hooks
    • running                                        hook=./scripts/completions.sh
    • took: 6s
  • checking distribution directory
    • cleaning dist
  • loading go mod information
  • build prerequisites
  • writing effective config file
    • writing                                        config=dist/config.yaml
  • building binaries
    • building                                       binary=dist/cli_linux_amd64_v1/kurtosis
    • took: 3s
  ⨯ build failed after 8s                    error=failed to build for linux_amd64_v1: exit status 1: # github.com/kurtosis-tech/kurtosis/cli/cli
/nix/store/f6087ybhyc86w648cng7yg0caci1qpvx-go-1.20.12/share/go/pkg/tool/linux_amd64/link: running g++ failed: exit status 1
/nix/store/idiaraknw071d20nlqp49s18gbvw4wa0-binutils-2.40/bin/ld: cannot find -lresolv: No such file or directory
/nix/store/idiaraknw071d20nlqp49s18gbvw4wa0-binutils-2.40/bin/ld: cannot find -lpthread: No such file or directory
/nix/store/idiaraknw071d20nlqp49s18gbvw4wa0-binutils-2.40/bin/ld: cannot find -lm: No such file or directory
/nix/store/idiaraknw071d20nlqp49s18gbvw4wa0-binutils-2.40/bin/ld: cannot find -lc: No such file or directory
collect2: error: ld returned 1 exit status

Error: Couldn't build the CLI binary for the current OS/arch
Error: An error occurred building the CLI
Error: Build script '/home/ben/dev/kurtosis/kurtosis/cli/scripts/build.sh' failed

Desired behavior
The build should succeed.
What is the severity of this bug?
Painful; this is causing significant friction in my workflow.
What area of the product does this pertain to?
Other: anything not covered by the above

Thanks for submitting this @Dartoxian ! tagging in @lostbean  for context, our resident nix wizard


tic tac toe added

I have added my tic tac toe project which was made using React.js

Can you make a PR again so that it can undergo code check?

I have removed tic tac toe and added shopping cart counter in it

I really like this game, good job!!


Multiple Labels, Single Command

Ability to add label on more than one side at a time, would be awesome

@hyraxx There are times when I only want the dimensions of one side, so this would have to be an option to "dimension all" or something similar.

Maybe have it as a check box next to each side

This could work if a single object is selected, but not for two objects. I'll look into it :)
Leaving the issue open while I research (also gives me time to think of the nicest UI)

I have just done some playing around with the JSX and implemented the Top/Left/Right/Bottom as checkboxes to enable doing all 4 at the same time (or any combination of).
Works for Single or Double objects (although double objects just does the same thing twice, e.g. Top/Bottom gives same result, just placed in different location & Right/Left gives same result, again just placed in different location).
Find edited JSX here (as a text file, change file extension to .jsx). Couldn't upload zip file for some reason.
Specify - Edited.txt

@hyraxx: I'm using @yuusuf-sallahuddin's idea as a jumping-off point and I think I have a pretty clean solution. I'll further test tomorrow... stay tuned.

@adamdehaven I've further played with things & added the option to rotate the vertical axis-text (again via checkbox) because sometimes it fits nicer that way (in my cramped patterns), other times it fits better with the text displayed horizontally. Would be nice also if we could also select the font-size from the window when we Specify the object/s. Not adding as a new issue, as it's just suggestions :)

upload your text rotation and I'll take a look

@hyraxx @yuusuf-sallahuddin Complete! Check out all the improvements in version 1.1

Totally forgot about this & haven't logged into github in a while. I'll check out the improvements in the new version :) Thanks heaps for the update & work @adamdehaven

Specify.jsx.old.txt
Here is my old version that had the option to rotate (or not) the vertical text. A very clumsy attempt at it anyway.

@yuusuf-sallahuddin I played around with the rotated text but received feedback (well, from the people I work with that use the script daily) that thought 9/10 times they'd prefer the vertical, so I didn't implement. Thanks for posting the old version though for anyone that stumbles across this issue via search 👍

@adamdehaven It's very rare that I would use the text for the vertical axis rotated on a horizontal aspect also, just sometimes when I created Specify on objects, the text created was longer than the object's height. I guess, sometimes it would be the same with horizontal axis text being wider than the object's width too.


Path is underspecified

What Data Package version are you using?
v2
Describe the Issue
The definition of URL or path is not sufficient as "POSIX path" is not formally specified - the link to Wikipedia leads to examples such as hostname:/directorypath/resource but I doubt this is wanted. Furthermore the description of forbidden pathes could be made more clear:

is only / disallowed or every path beginning with /?
is only .hidden disallowed or also other names starting with a dot and/or what about path/to/.hidden/file?

Do avoid having to read the full POSIX specification, how about a formal definition of path such as

any non-empty sequence of bytes except slash and null byte and not starting with a dot is a valid filename
a path is a non-empty sequence of filenames, separated with slash

Participation

[X] I am willing to submit a pull request for this issue.

@nichtich
I agree


Installation failed when used in an empty debian VM

I'm trying to easily install the platform in a debian Github Codespace (https://github.com/features/codespaces).
The platform installer is not working as expected. When running it, it fails with the following error message:
@TheLortex ➜ /workspaces/ocaml-codespace (main) $ sudo bash < <(curl -L https://github.com/tarides/ocaml-platform-installer/releases/latest/download/installer.sh)
[...]
=> Install into /usr/local/bin
Installation is done. Please run 'ocaml-platform' to install the Platform tools inside your set switch.
@TheLortex ➜ /workspaces/ocaml-codespace (main) $ ocaml-platform
ocaml-platform: [ERROR] Command 'opam show ocaml -f installed-version --normalise --yes -q
           --color=never --root /home/codespace/.opam' failed: exited with 50

When running the opam command manually I get [ERROR] Opam has not been initialised, please run 'opam init'

The root cause is an error during opam init, which is not reported properly: https://github.com/tarides/ocaml-platform-installer/pull/79
With this patch, I now get:
ocaml-platform: [DEBUG] Running: 'opam' 'init' '--yes' '-q' '--color=never' '--root' '/root/.opam'
ocaml-platform: [DEBUG] Error in execution:
# bwrap: Creating new namespace failed: Operation not permitted
### output ###
# output-file          /tmp/opam-xxx-11/ocaml-system-11-8b8a2d.out
# env-file             /tmp/opam-xxx-11/ocaml-system-11-8b8a2d.env
# exit-code            1
# command              ~/.opam/opam-init/hooks/sandbox.sh build ocaml gen_ocaml_config.ml
# path                 ~/.opam/default/.opam-switch/build/ocaml-system.4.11.1
# context              2.0.8 | linux/x86_64 |  | https://opam.ocaml.org#6447b747
#=== ERROR while compiling ocaml-system.4.11.1 ================================#

[ERROR] The compilation of ocaml-system failed at "/root/.opam/opam-init/hooks/sandbox.sh build ocaml gen_ocaml_config.ml".
[NOTE] Will configure from built-in defaults.
[WARNING] Running as root is not recommended
ocaml-platform: [ERROR] Command 'opam init --yes -q --color=never --root /root/.opam' failed: exited with 31

As a workaround for now, you can init opam manually with opam init --disable-sandboxing and run ocaml-platform again.


Catch Throwable instead of Exception from loadLibrary

Summary
We're seeing cases where RN initialization fails due to:
UnsatisfiedLinkError: could find DSO to load: libreactnativejni.so
We're using NativeModuleCallExceptionHandler to catch initialization
exceptions and prevent the app from crashing. However, since
UnsatisfiedLinkerError is an Error instead of Exception, it is not
caught and thus the app crashes anyways.
This change fixes that by catching Throwable instead of Exception
from XReactInstanceManagerImpl.doInBackground(). I also had to change
Result.of() to take a Throwable as well, thus a few other places had
to be updated as well.
Test plan
All tests pass, throwing an Error from SoLoader.loadLibrary() is correctly caught
and reported to NativeModuleCallExceptionHandler

@felipecsl updated the pull request - view changes

@felipecsl updated the pull request - view changes

Looks like you need to rebase from master.

@felipecsl updated the pull request - view changes

@facebook-github-bot shipit

@felipecsl updated the pull request - view changes

@felipecsl updated the pull request - view changes

@lelandrichardson can you try to ship it again?

@facebook-github-bot shipit

Thanks for importing. If you are an FB employee go to Phabricator to review internal test results.

I tried to merge this pull request into the Facebook internal repo but some checks failed. To unblock yourself please check the following: Does this pull request pass all open source tests on GitHub? If not please fix those. Does the code still apply cleanly on top of GitHub master? If not can please rebase. In all other cases this means some internal test failed, for example a part of a fb app won't work with this pull request. I've added the Import Failed label to this pull request so it is easy for someone at fb to find the pull request and check what failed. If you don't see anyone comment in a few days feel free to comment mentioning one of the core contributors to the project so they get a notification.

@facebook-github-bot shipit

cc @mkonicek could you help us take a look at the stack trace or reason why the import failed?

@felipecsl updated the pull request - view changes - changes since last import

@facebook-github-bot shipit

Failed due to this exception:
/data/sandcastle/boxes/instance-fb4a-fbsource-android-instrumentation-tests/fbandroid/java/com/instagram/android/react/IgReactExceptionManager.java:25: error: com.instagram.android.react.IgReactExceptionManager is not abstract and does not override abstract method handleException(java.lang.Throwable) in com.facebook.react.bridge.NativeModuleCallExceptionHandler
public class IgReactExceptionManager extends BaseJavaModule implements
       ^
/data/sandcastle/boxes/instance-fb4a-fbsource-android-instrumentation-tests/fbandroid/java/com/instagram/android/react/IgReactExceptionManager.java:153: error: method does not override or implement a method from a supertype
  @Override
  ^
/data/sandcastle/boxes/instance-fb4a-fbsource-android-instrumentation-tests/fbandroid/java/com/instagram/android/react/SimpleReactFragment.java:35: error: com.instagram.android.react.SimpleReactFragment is not abstract and does not override abstract method handleException(java.lang.Throwable) in com.facebook.react.bridge.NativeModuleCallExceptionHandler
public class SimpleReactFragment extends IgFragment implements
       ^
/data/sandcastle/boxes/instance-fb4a-fbsource-android-instrumentation-tests/fbandroid/java/com/instagram/android/react/SimpleReactFragment.java:244: error: method does not override or implement a method from a supertype
  @Override
  ^
/data/sandcastle/boxes/instance-fb4a-fbsource-android-instrumentation-tests/fbandroid/java/com/instagram/android/activity/MainTabActivity.java:-1: note: Some input files use or override a deprecated API.
/data/sandcastle/boxes/instance-fb4a-fbsource-android-instrumentation-tests/fbandroid/java/com/instagram/android/activity/MainTabActivity.java:-1: note: Recompile with -Xlint:deprecation for details.
/data/sandcastle/boxes/instance-fb4a-fbsource-android-instrumentation-tests/fbandroid/java/com/instagram/android/activity/FlickrAuthActivity.java:-1: note: Some input files use unchecked or unsafe operations.
/data/sandcastle/boxes/instance-fb4a-fbsource-android-instrumentation-tests/fbandroid/java/com/instagram/android/activity/FlickrAuthActivity.java:-1: note: Recompile with -Xlint:unchecked for details.
Errors: 4. Warnings: 20.

I guess this requires Facebook to make internal changes to accomodate this. The only thing is replacing Exception with Throwable in places where you implement NativeModuleCallExceptionHandler

Ping on this again

Why catch all Throwables? Most errors aren't recoverable from so they should rightly so crash the system; we shouldn't be catching everything. Have you looked into catching the UnsatisfiedLinkError, which sometimes can be recovered from, at the root of crash site?

We can't catch this because it happens inside an AsyncTask started from RN:
java.lang.RuntimeException: An error occured while executing doInBackground()
        at android.os.AsyncTask$3.done(AsyncTask.java:300)
        at java.util.concurrent.FutureTask.finishCompletion(FutureTask.java:355)
        at java.util.concurrent.FutureTask.setException(FutureTask.java:222)
        at java.util.concurrent.FutureTask.run(FutureTask.java:242)
        at android.os.AsyncTask$SerialExecutor$1.run(AsyncTask.java:231)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1112)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:587)
        at java.lang.Thread.run(Thread.java:841)
Caused by: java.lang.UnsatisfiedLinkError: could find DSO to load: libreactnativejni.so
        at com.facebook.soloader.SoLoader.loadLibraryBySoName(SoLoader.java:213)
        at com.facebook.soloader.SoLoader.loadLibrary(SoLoader.java:178)
        at com.facebook.react.bridge.ReactBridge.staticInit(ReactBridge.java:39)
        at com.facebook.react.bridge.ReactBridge.<clinit>(ReactBridge.java:31)
        at com.facebook.react.bridge.NativeMap.<clinit>(NativeMap.java:22)
        at com.facebook.react.JSCConfig$1.getConfigMap(JSCConfig.java:14)
        at com.facebook.react.ReactInstanceManagerImpl$ReactContextInitAsyncTask.doInBackground(ReactInstanceManagerImpl.java:193)
        at com.facebook.react.ReactInstanceManagerImpl$ReactContextInitAsyncTask.doInBackground(ReactInstanceManagerImpl.java:179)
        at android.os.AsyncTask$2.call(AsyncTask.java:288)
        at java.util.concurrent.FutureTask.run(FutureTask.java:237)
        at android.os.AsyncTask$SerialExecutor$1.run(AsyncTask.java:231)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1112)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:587)
        at java.lang.Thread.run(Thread.java:841)

Also we don't want to crash the app at startup because RN failed to initialize. Most of the app is still usable. While you won't be able to use the RN flows, the rest works fine and we want to gracefully recover from that

I think you're confounding the boundaries between error vs exception. In general, it's bad practice to catch errors and it's ok to catch checked Exceptions, which doesn't include RuntimeExceptions/uncheck Exceptions, but lucky for us UnsatisfiedLinkError is an ... exception (har har).
I'm sure you've tried fixing the SoLoader issue and haven't been able to find a real solution and that's resulted in this pull request. cc @michalgr
Try doing something like
try {
    ReactBridge.staticInit(); // b/c this is what's causing your crash.
} catch (UnsatisfiedLinkError e) {
    // Set some flag to not start RN.
}

before attempting to initialize RN.

I don't know what you mean by UnsatisfiedLinkError being an Exception. It extends Error instead: https://developer.android.com/reference/java/lang/UnsatisfiedLinkError.html


solved issue #3073

Fixes:  #3073
Description
make the dropdown button work.

Type of PR

[*] Bug fix
[ ] Feature enhancement
[ ] Documentation update
[ ] Other (specify): _______________

Screenshots / videos (if applicable)
https://github.com/user-attachments/assets/fb2ff1fd-be7f-4fda-80b4-250f47ddc4db
Checklist:

[x] I have made this change from my own.
[ ] I have taken help from some online resources.
[x] My code follows the style guidelines of this project.
[x] I have performed a self-review of my own code.
[x] I have commented my code, particularly in hard-to-understand areas.
[ ] I have made corresponding changes to the documentation.
[x] My changes generate no new warnings.
[x] I have tested the changes thoroughly before submitting this pull request.
[x] I have provided relevant issue numbers and screenshots after making the changes.

@anuragverma108 Please review the PR and merge it accordingly.

Can I post a video where you made changes @Devanshu1603

Can u post a video where you made changes @Devanshu1603

ok i am posting one

@sailaja-adapa  I have updated the comment and added a video.

Can you update the branch please

Can you update the branch please

Can you please explain what to do. couldn't get it.

U raised PR from a branch right
go to that branch you can see update branch there this will help ur branch to be upto date since I made some changes in project

@sailaja-adapa  there is no options of updation

Ok leave it branch is upto date @Devanshu1603


Dependency Upgrade to fix CVE Vulnerabilities

Currently the following dependency has 12 CVE vulnerabilities and there is a latest version 1.7.2 of it that fixes these issues. Please bump up the version.
<dependency>
      <groupId>com.microsoft.azure</groupId>
      <artifactId>azure-client-authentication</artifactId>
      <version>1.7.0</version>
</dependency>

@conniey @hemanttanwar @yvgopal PTAL

@alzimmermsft is updating this as part of: https://github.com/Azure/azure-sdk-for-java/issues/8270

Thanks for working on this! I was able to upgrade and consolidate multiple dependencies. :)


Really...

Programming waifus.
Why didn't I get any kind of ideas like this.

lol, this isn't my own idea actually, the actual repo is https://github.com/cat-milk/Anime-Girls-Holding-Programming-Books, i just made a web app for it so that people can view the images easily.


Revert "fix: run postinstall script explicitly with bash (#4116)"

Summary
This reverts commit b32b4edf3d1167f87cb3f4aaf1acd3d5378cefb3.
We are reverting this because we found out that while this fixes the postinstall
on Windows, it breaks it on mac and other devices.
See: https://github.com/cdr/code-server/issues/3874#issuecomment-925397980
Additional Context
This change came in #4116 came from @maxloh with the goal of:

Currently, Windows default script-shell (cmd) fails to run the postinstall script.
This commit fixes the problem by running postinstall.sh explicitly with the default bash executable of the OS.

While that fixed the postinstall issue on Windows, it broke it for anyone installing with Homebrew since our formula does not depend on bash. Instead of modifying the formula, we are opting for reverting b32b4edf3d1167f87cb3f4aaf1acd3d5378cefb3 and using sh instead.
Our reasoning is that if someone on Windows has bash, surely they have sh as well.
Note: we don't know how @maxloh was actually installing code-server so we don't have an exact way to test for their situation but this should work. I had also proposed doing this:
"scripts": {
      "postinstall": "[ $(command -v bash) >/dev/null ] && bash ./postinstall.sh || ./postinstall.sh"
    }

but that assumes the person has command installed Windows which may or may not be the case.
We think we should also try to add some tests for this, which we may do in a follow-up PR.
Todos

[x] open up follow-up issue https://github.com/cdr/code-server/issues/4232

Fixes #3874
Fixes #4209

has this been tested on mac / windows / linux? if not happy to jump in and do so :)

has this been tested on mac / windows / linux? if not happy to jump in and do so :)

Thanks for offering Ben! Sadly, @code-asher came to the realize that this is not easily tested (at least with the way code-server is packaged up for Homebrew).
We know sh works on mac + Linux so no issues there and we assume it should be fine on Windows. I think if it uses WSL then I assume sh exists and it should work.
I think we'll have to merge and then have the community test and report any issues.


interaction model

Greetings and thanks for providing this excellent software. I am seeking clarification regarding unexpected behavior of the single_snp function in implementing a LMM with an interaction term. According to the API documentation http://microsoftgenomics.github.io/FaST-LMM/ SNP by covariate interactions can be implemented as follows:
interact_with_snp – index of a covariate to perform an interaction test with. Allows for interaction testing (interact_with_snp x snp will be tested) default: None
I have a covariate file with 39 columns, including the first two columns with subject IDs:
`awk '{print NF}' covmat.txt | sort -nu | tail -n 1
39
head -3 covmat.txt | cut -f1-4
GTEX-111CU-0003-SM-5DWTR	GTEX-111CU-0003-SM-5DWTR	 0.000000000	-0.018000000
GTEX-111FC-0001-SM-5DWSO	GTEX-111FC-0001-SM-5DWSO	 0.000000000	-0.015600000
GTEX-111VG-0004-SM-5DWSX	GTEX-111VG-0004-SM-5DWSX	 0.000000000	-0.019700000`
I would like to examine SNP by covariate interactions for the 37th covariate in the 39th column of the covariate file. When I run this code,
results_df = single_snp(bed_fn,  pheno_fn, covar=cov_fn, count_A1=True, interact_with_snp=37, output_file_name="outint.txt")
I get an error:
assert 0 <= interact_with_snp and interact_with_snp < covar.shape[1]-1, "interact_with_snp is out of range"
It looks to me that I need to enter interact_with_snp=36 to test the interaction for the 37th covariate (39th column of covariate file). Could you please confirm/clarify/advise?
Thanks much, W

Warren,
Thanks for using FastLMM!
Yes, if you have 37 covariates and you want to test the interaction with the last one, then interact_with_snp=36
Should work. This is because the family and iid columns don’t count and because we start counting covariates with “0”.

Carl

From<EMAIL_ADDRESS>Sent: Wednesday, March 14, 2018 8:19 AM
To<EMAIL_ADDRESS>Cc<EMAIL_ADDRESS>Subject: [MicrosoftGenomics/FaST-LMM] interaction model (#29)
Greetings and thanks for providing this excellent software. I am seeking clarification regarding unexpected behavior of the single_snp function in implementing a LMM with an interaction term. According to the API documentation http://microsoftgenomics.github.io/FaST-LMM/ SNP by covariate interactions can be implemented as follows:
interact_with_snp – index of a covariate to perform an interaction test with. Allows for interaction testing (interact_with_snp x snp will be tested) default: None
I have a covariate file with 39 columns, including the first two columns with subject IDs:
`awk '{print NF}' covmat.txt | sort -nu | tail -n 1
39
head -3 covmat.txt | cut -f1-4
GTEX-111CU-0003-SM-5DWTR GTEX-111CU-0003-SM-5DWTR 0.000000000 -0.018000000
GTEX-111FC-0001-SM-5DWSO GTEX-111FC-0001-SM-5DWSO 0.000000000 -0.015600000
GTEX-111VG-0004-SM-5DWSX GTEX-111VG-0004-SM-5DWSX 0.000000000 -0.019700000`
I would like to examine SNP by covariate interactions for the 37th covariate in the 39th column of the covariate file. When I run this code,
results_df = single_snp(bed_fn, pheno_fn, covar=cov_fn, count_A1=True, interact_with_snp=37, output_file_name="outint.txt")
I get an error:
assert 0 <= interact_with_snp and interact_with_snp < covar.shape[1]-1, "interact_with_snp is out of range"
It looks to me that I need to enter interact_with_snp=36 to test the interaction for the 37th covariate (39th column of covariate file). Could you please confirm/clarify/advise?
Thanks much, W
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Thanks, Carl. Much appreciated.
Best, Warren

From: Carl Kadie<EMAIL_ADDRESS>Sent: Friday, March 16, 2018 1:02:16 PM
To: MicrosoftGenomics/FaST-LMM
Cc: WarrenDavidAnderson; Author
Subject: Re: [MicrosoftGenomics/FaST-LMM] interaction model (#29)
Warren,
Thanks for using FastLMM!
Yes, if you have 37 covariates and you want to test the interaction with the last one, then interact_with_snp=36
Should work. This is because the family and iid columns don’t count and because we start counting covariates with “0”.

Carl

From<EMAIL_ADDRESS>Sent: Wednesday, March 14, 2018 8:19 AM
To<EMAIL_ADDRESS>Cc<EMAIL_ADDRESS>Subject: [MicrosoftGenomics/FaST-LMM] interaction model (#29)
Greetings and thanks for providing this excellent software. I am seeking clarification regarding unexpected behavior of the single_snp function in implementing a LMM with an interaction term. According to the API documentation http://microsoftgenomics.github.io/FaST-LMM/ SNP by covariate interactions can be implemented as follows:
interact_with_snp – index of a covariate to perform an interaction test with. Allows for interaction testing (interact_with_snp x snp will be tested) default: None
I have a covariate file with 39 columns, including the first two columns with subject IDs:
`awk '{print NF}' covmat.txt | sort -nu | tail -n 1
39
head -3 covmat.txt | cut -f1-4
GTEX-111CU-0003-SM-5DWTR GTEX-111CU-0003-SM-5DWTR 0.000000000 -0.018000000
GTEX-111FC-0001-SM-5DWSO GTEX-111FC-0001-SM-5DWSO 0.000000000 -0.015600000
GTEX-111VG-0004-SM-5DWSX GTEX-111VG-0004-SM-5DWSX 0.000000000 -0.019700000`
I would like to examine SNP by covariate interactions for the 37th covariate in the 39th column of the covariate file. When I run this code,
results_df = single_snp(bed_fn, pheno_fn, covar=cov_fn, count_A1=True, interact_with_snp=37, output_file_name="outint.txt")
I get an error:
assert 0 <= interact_with_snp and interact_with_snp < covar.shape[1]-1, "interact_with_snp is out of range"
It looks to me that I need to enter interact_with_snp=36 to test the interaction for the 37th covariate (39th column of covariate file). Could you please confirm/clarify/advise?
Thanks much, W
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Hi Carl,
Could you please confirm that when I run fast lmm with an interaction terms, the columns PValue and SnpWeight indicate the nominal p-value and the regression coefficient (beta) for the snp x covariate interaction term.
Thanks much,
Warren

From: Carl Kadie<EMAIL_ADDRESS>Sent: Friday, March 16, 2018 1:02:16 PM
To: MicrosoftGenomics/FaST-LMM
Cc: WarrenDavidAnderson; Author
Subject: Re: [MicrosoftGenomics/FaST-LMM] interaction model (#29)
Warren,
Thanks for using FastLMM!
Yes, if you have 37 covariates and you want to test the interaction with the last one, then interact_with_snp=36
Should work. This is because the family and iid columns don’t count and because we start counting covariates with “0”.

Carl

From<EMAIL_ADDRESS>Sent: Wednesday, March 14, 2018 8:19 AM
To<EMAIL_ADDRESS>Cc<EMAIL_ADDRESS>Subject: [MicrosoftGenomics/FaST-LMM] interaction model (#29)
Greetings and thanks for providing this excellent software. I am seeking clarification regarding unexpected behavior of the single_snp function in implementing a LMM with an interaction term. According to the API documentation http://microsoftgenomics.github.io/FaST-LMM/ SNP by covariate interactions can be implemented as follows:
interact_with_snp – index of a covariate to perform an interaction test with. Allows for interaction testing (interact_with_snp x snp will be tested) default: None
I have a covariate file with 39 columns, including the first two columns with subject IDs:
`awk '{print NF}' covmat.txt | sort -nu | tail -n 1
39
head -3 covmat.txt | cut -f1-4
GTEX-111CU-0003-SM-5DWTR GTEX-111CU-0003-SM-5DWTR 0.000000000 -0.018000000
GTEX-111FC-0001-SM-5DWSO GTEX-111FC-0001-SM-5DWSO 0.000000000 -0.015600000
GTEX-111VG-0004-SM-5DWSX GTEX-111VG-0004-SM-5DWSX 0.000000000 -0.019700000`
I would like to examine SNP by covariate interactions for the 37th covariate in the 39th column of the covariate file. When I run this code,
results_df = single_snp(bed_fn, pheno_fn, covar=cov_fn, count_A1=True, interact_with_snp=37, output_file_name="outint.txt")
I get an error:
assert 0 <= interact_with_snp and interact_with_snp < covar.shape[1]-1, "interact_with_snp is out of range"
It looks to me that I need to enter interact_with_snp=36 to test the interaction for the 37th covariate (39th column of covariate file). Could you please confirm/clarify/advise?
Thanks much, W
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Warren,
I’m sorry I don’t know that option well. I believe that it was added by Christoph Lippert who is now at https://www.mdc-berlin.de/lippert.
You might also want to look at the source code: https://github.com/MicrosoftGenomics/FaST-LMM/blob/master/fastlmm/association/single_snp.py. The part related to interaction seems relatively simple.

Carl

From: WarrenDavidAnderson<EMAIL_ADDRESS>Sent: Tuesday, March 20, 2018 2:01:35 PM
To: MicrosoftGenomics/FaST-LMM
Cc: Carl Kadie; Comment
Subject: Re: [MicrosoftGenomics/FaST-LMM] interaction model (#29)
Hi Carl,
Could you please confirm that when I run fast lmm with an interaction terms, the columns PValue and SnpWeight indicate the nominal p-value and the regression coefficient (beta) for the snp x covariate interaction term.
Thanks much,
Warren

From: Carl Kadie<EMAIL_ADDRESS>Sent: Friday, March 16, 2018 1:02:16 PM
To: MicrosoftGenomics/FaST-LMM
Cc: WarrenDavidAnderson; Author
Subject: Re: [MicrosoftGenomics/FaST-LMM] interaction model (#29)
Warren,
Thanks for using FastLMM!
Yes, if you have 37 covariates and you want to test the interaction with the last one, then interact_with_snp=36
Should work. This is because the family and iid columns don’t count and because we start counting covariates with “0”.

Carl

From<EMAIL_ADDRESS>Sent: Wednesday, March 14, 2018 8:19 AM
To<EMAIL_ADDRESS>Cc<EMAIL_ADDRESS>Subject: [MicrosoftGenomics/FaST-LMM] interaction model (#29)
Greetings and thanks for providing this excellent software. I am seeking clarification regarding unexpected behavior of the single_snp function in implementing a LMM with an interaction term. According to the API documentation http://microsoftgenomics.github.io/FaST-LMM/ SNP by covariate interactions can be implemented as follows:
interact_with_snp – index of a covariate to perform an interaction test with. Allows for interaction testing (interact_with_snp x snp will be tested) default: None
I have a covariate file with 39 columns, including the first two columns with subject IDs:
`awk '{print NF}' covmat.txt | sort -nu | tail -n 1
39
head -3 covmat.txt | cut -f1-4
GTEX-111CU-0003-SM-5DWTR GTEX-111CU-0003-SM-5DWTR 0.000000000 -0.018000000
GTEX-111FC-0001-SM-5DWSO GTEX-111FC-0001-SM-5DWSO 0.000000000 -0.015600000
GTEX-111VG-0004-SM-5DWSX GTEX-111VG-0004-SM-5DWSX 0.000000000 -0.019700000`
I would like to examine SNP by covariate interactions for the 37th covariate in the 39th column of the covariate file. When I run this code,
results_df = single_snp(bed_fn, pheno_fn, covar=cov_fn, count_A1=True, interact_with_snp=37, output_file_name="outint.txt")
I get an error:
assert 0 <= interact_with_snp and interact_with_snp < covar.shape[1]-1, "interact_with_snp is out of range"
It looks to me that I need to enter interact_with_snp=36 to test the interaction for the 37th covariate (39th column of covariate file). Could you please confirm/clarify/advise?
Thanks much, W
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Warren,
Not sure Christoph got back to you.  I believe the answer is yes, but to confirm, would need to see how you are calling the code.
Thanks,
David

Hi David,
Thanks for getting in touch. I have not heard from Christoph. I am calling the function as follows:
results_df = single_snp(bed_fn,  pheno_fn, covar=cov_fn, count_A1=True, interact_with_snp=17, output_file_name=outname)
Best,
Warren

From: David Heckerman<EMAIL_ADDRESS>Sent: Friday, March 23, 2018 10:21:12 AM
To: MicrosoftGenomics/FaST-LMM
Cc: WarrenDavidAnderson; Author
Subject: Re: [MicrosoftGenomics/FaST-LMM] interaction model (#29)
Warren,
Not sure Christoph got back to you. I believe the answer is yes, but to confirm, would need to see how you are calling the code.
Thanks,
David
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Hi Warren,
What David writes is correct. The regression weights as well as the standard errors correspond to the (multiplicative) interaction term between a SNP at the corresponding position and the variable that you provided as input for the interaction.
Cheers,
Christoph

On 23. Mar 2018, at 15:26, WarrenDavidAnderson<EMAIL_ADDRESS>wrote:
Hi David,
Thanks for getting in touch. I have not heard from Christoph. I am calling the function as follows:
results_df = single_snp(bed_fn, pheno_fn, covar=cov_fn, count_A1=True, interact_with_snp=17, output_file_name=outname)
Best,
Warren

From: David Heckerman<EMAIL_ADDRESS>Sent: Friday, March 23, 2018 10:21:12 AM
To: MicrosoftGenomics/FaST-LMM
Cc: WarrenDavidAnderson; Author
Subject: Re: [MicrosoftGenomics/FaST-LMM] interaction model (#29)
Warren,
Not sure Christoph got back to you. I believe the answer is yes, but to confirm, would need to see how you are calling the code.
Thanks,
David
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Hi Christoph,
Many thanks for confirming that.
Best,
Warren

From: Christoph Lippert<EMAIL_ADDRESS>Sent: Friday, March 23, 2018 10:52:22 AM
To: MicrosoftGenomics/FaST-LMM
Cc: WarrenDavidAnderson; Author
Subject: Re: [MicrosoftGenomics/FaST-LMM] interaction model (#29)
Hi Warren,
What David writes is correct. The regression weights as well as the standard errors correspond to the (multiplicative) interaction term between a SNP at the corresponding position and the variable that you provided as input for the interaction.
Cheers,
Christoph

On 23. Mar 2018, at 15:26, WarrenDavidAnderson<EMAIL_ADDRESS>wrote:
Hi David,
Thanks for getting in touch. I have not heard from Christoph. I am calling the function as follows:
results_df = single_snp(bed_fn, pheno_fn, covar=cov_fn, count_A1=True, interact_with_snp=17, output_file_name=outname)
Best,
Warren

From: David Heckerman<EMAIL_ADDRESS>Sent: Friday, March 23, 2018 10:21:12 AM
To: MicrosoftGenomics/FaST-LMM
Cc: WarrenDavidAnderson; Author
Subject: Re: [MicrosoftGenomics/FaST-LMM] interaction model (#29)
Warren,
Not sure Christoph got back to you. I believe the answer is yes, but to confirm, would need to see how you are calling the code.
Thanks,
David
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fix(types): allow string for watch handlers

What kind of change does this PR introduce? (check at least one)

[x] Bugfix
[ ] Feature
[ ] Code style update
[ ] Refactor
[ ] Build-related changes
[ ] Other, please describe:

Does this PR introduce a breaking change? (check one)

[ ] Yes
[x] No

If yes, please describe the impact and migration path for existing applications:
The PR fulfills these requirements:

[x] It's submitted to the dev branch for v2.x (or to a previous version branch), not the master branch
[ ] When resolving a specific issue, it's referenced in the PR's title (e.g. fix #xxx[,#xxx], where "xxx" is the issue number)
[x] All tests are passing: https://github.com/vuejs/vue/blob/dev/.github/CONTRIBUTING.md#development-setup
[x] New/updated tests are included

If adding a new feature, the PR's description includes:

[ ] A convincing reason for adding this feature (to avoid wasting your time, it's best to open a suggestion issue first and wait for approval before working on it)

Other information:
Adds missing TypeScript type info allowing watcher handler to be of string type

@posva anything on my side to get this merged in?

No, just waiting :)


[NeuralChat] add customized system prompts

Type of Change
enhancement
Description
allow users to set system prompts
Expected Behavior & Potential Risk
allow users to set system prompts
How has this PR been tested?
ut
Dependency Change?
None

System prompts should be set properly. Users can check intel-extension-for-transformers/intel_extension_for_transformers/neural_chat/prompts/prompt.py to get the knowledge of how each supported model relates to its template.


Crash in FlurryContentLoadingManager deRegisterPreCachingDelegate (string equality)

Version 7.6.3 of the FlurrySDK and FlurryAds frameworks.
We're seeing a crash during runtime that looks like:
Fatal Exception: NSInvalidArgumentException
0  CoreFoundation                 0x181382db0 __exceptionPreprocess
1  libobjc.A.dylib                0x1809e7f80 objc_exception_throw
2  CoreFoundation                 0x181389c4c __methodDescriptionForSelector
3  CoreFoundation                 0x181386bec ___forwarding___
4  CoreFoundation                 0x181284c5c _CF_forwarding_prep_0
5  Flurry_iOS_SDK                 0x100c4c650 __60-[FlurryContentLoadingManager deRegisterPreCachingDelegate:]_block_invoke (FlurryContentLoadingManager.m:1382)
6  Flurry_iOS_SDK                 0x100c45ed0 __65-[FlurryPreCachingDelegatesMapManager processReadBlockWithBlock:]_block_invoke (FlurryContentLoadingManager.m:88)
7  libdispatch.dylib              0x180dcd4bc _dispatch_call_block_and_release
8  libdispatch.dylib              0x180dcd47c _dispatch_client_callout
9  libdispatch.dylib              0x180dd7d50 _dispatch_async_redirect_invoke
10 libdispatch.dylib              0x180dcd47c _dispatch_client_callout
11 libdispatch.dylib              0x180ddb914 _dispatch_root_queue_drain
12 libdispatch.dylib              0x180ddb0b0 _dispatch_worker_thread3
13 libsystem_pthread.dylib        0x180fe5470 _pthread_wqthread
14 libsystem_pthread.dylib        0x180fe5020 start_wqthread

The exception thrown is:
Fatal Exception: NSInvalidArgumentException
-[__NSCFString isEqualToValue:]: unrecognized selector sent to instance 0x13e4021f0

Re

Fixed as of 7.8.0.


Vapor 3 support

Is it coming?

The S3 definitely. We will be starting new project soon and it will require AWS S3 to store the content.

In that case, then yes. Have a look at https://github.com/nodes-vapor/readme/projects/2 for a better overview of what we're migrating and the current status.

@steffendsommer I am also working on a more abstract version of your Storage https://github.com/zdnk/vapor-filesystem. Maybe we could join forces if you are interested. It is heavily inspired by https://github.com/thephpleague/flysystem, but I believe it brings more flexibility and wider usage than Storage.

Maybe it would make sense to take a look at this, for the S3 connection stuff https://github.com/swift-aws/s3


Allow disable viewcrawler master

Ready to merge!

Great! This is huge!

@yogurtearl fyi

Was trying to follow along with issues/requests and still not quite sure how to disable the crawler.
We use the MixpanelAPI.getInstance(context, token) method. Is there a method to disable it via the API or do you have to pass in a MPConfig object?

You can disable the ViewCrawler by adding the following permission to your AndroidManifest.xml file:
<meta-data android:name="com.mixpanel.android.MPConfig.DisableViewCrawler"
    android:value="true" />

At this time there is no means to disable the ViewCrawler outside of this permission. Will this work for your needs?

Thank you for adding this option.
It would be nice if it was easy to find documentation for this configuration option. I couldn't find it anywhere aside from this PR, which seems odd.

@ryanseams isn't there another way to do this? i'm afraid if anyone is using mixpanel in a library, doing it only through the manifest, will forcefully disable that feature for the host app as well. which is really bad.
the only solution might be to indicate users of such library that they need to explicitly enable it through:
<meta-data android:name="com.mixpanel.android.MPConfig.DisableViewCrawler"
    android:value="true" />

is this correct?

hi @takecare does this PR to allow disabling of the viewcrawler per project token work?

don't think so. i'd say that's a different issue. and that solution is still based on meta-data entry.
given it's based on the manifest (as manifests get merged) you can only have one meta-data entry per key. if you define one in a library project's manifest file, it will be overridden by the host app's manifest (if it also defines that meta-data entry).
suppose someone develops a library called 'mylib' which uses mixpanel and they don't want to enable the view crawler. they go in the manifest for the library project and add the meta-data entry disabling it.
now you create an app - 'mysuperapp' - that has 'mylib' as a dependency and also uses mixpanel, but you want to enable the view crawler on the app. two things can happen:

you don't add the meta-data entry assuming view crawler is enabled by default, but upon the manifests being merged (the one from your app + the one from the lib) the entry from the lib gets into the final manifest thus disabling view crawler. this is wrong.

you're aware of 'mylib' disabling view crawler, so you add the meta-data in your manifest (which prevails over mylib's) but now view crawler will be enabled on mylib's mixpanel instance. this is also wrong.

the way i see it, the only solution would be to allow disabling the view crawler in a way that's not based on entries on the manifest.


Explorer doesn't fit width when double clicking on the resize handler

VSCode Version: Code 1.7.1 (02611b40b24c9df2726ad8b33f5ef5f67ac30b44, 2016-11-03T13:46:46.244Z)
OS Version: Linux x64 4.8.6-1-ARCH
Extensions:

Extension
Author
Version

rainbow-brackets
2gua
0.0.6

vscode-markdownlint
DavidAnson
0.5.0

EditorConfig
EditorConfig
0.3.4

material-icon-theme
PKief
1.1.3

vscode-docker
PeterJausovec
0.0.7

vscode-file-peek
abierbaum
1.0.1

theme-colorful-defaults
aeschli
0.1.10

path-intellisense
christian-kohler
1.1.0

vscode-eslint
dbaeumer
1.0.8

tslint
eg2
0.5.40

vscode-npm
fknop
3.3.0

flow-for-vscode
flowtype
0.3.3

Theme-MarkdownKit
ms-vscode
0.1.1

csharp
ms-vscode
1.4.1

debugger-for-chrome
msjsdiag
2.2.2

vscode-mssql
sanagama
0.0.4

whitespace
sandcastle
0.0.4

RustyCode
saviorisdead
0.19.1

theme-tesla
smlombardi
0.0.1

es6-mocha-snippets
spoonscen
0.0.1

guides
spywhere
0.5.1

change-case
wmaurer
1.0.0

JavaScriptSnippets
xabikos
1.2.0

ReactSnippets
xabikos
1.2.0

Steps to Reproduce:
While on Explorer tab, when you double click  it used to collapse or expand to fixed width. But now if its expanded beyond the fixed with double clicking on the resize handler doesn't reduce the size it keeps expanding.

Wow, good catch. No clue how we broke that...

This seems to be caused by https://github.com/Microsoft/vscode/commit/42ec7da2ba58cfb7b25b930a54dd5bb038e5aba4 which was a fix for https://github.com/Microsoft/vscode/issues/13787

@joaomoreno maybe something for you as CSS wizard :). When you double click on the explorer, we compute the optimal width of the DOM nodes that contain the label of the file. Since the label has flex: 1 set, somehow the optimal width is growing and growing each time you double click.
Now, when I remove flex: 1 it works again but then this happens:

have a file with long text
enable icons in the explorer (use minimal icon theme, not seti)
resize the explorer
=> the label moves


support upload data to QingStor from stdin

it is a convenient feature to upload data to QingStor from stdin. We can pipeline data from upstream command and upload data to QingStor without write to local disk.
some_command_generate_lot_data | gzip |  qsctl cp - qs://some_bucket/some_key

Reasonable, accepted.

Supported by https://github.com/yunify/qsctl/pull/5 , thx @wangzw


fix: image captions

Ref RM-10929

🧰 Changes
Fixes rendering some captions.
It's super unclear to me why sometimes the image saves the caption as children and sometimes as a prop. But it wasn't rendering the children!
🧬 QA & Testing

Broken on production.
Working in this PR app.

This PR was released!
🚀 Changes included in v7.6.6


podman support for vscode:extension/ms-vscode-remote.remote-containers

Hi, I'm trying to build an application inside VS-Code and using podman for OCI not docker.
The extension
vscode:extension/ms-vscode-remote.remote-containers
presently as described/deployed here:
https://code.visualstudio.com/docs/remote/containers-tutorial
does not present work with podman (I don't alias docker to podman) and I'm hope to find a link to the best way to add//fix this code for my project
https://github.com/elasticdotventures/candi-date

Hello,
I wanted to add I am also experiencing this issue and found a Stack Overflow post with the exact same problem I am facing:
https://stackoverflow.com/questions/72297060/what-could-be-the-reason-why-podman-isnt-working-on-remote-containers
As an aside, I was able to successfully develop in a container using Docker Desktop on my machine (Windows 11, WSL2 - Debian).
While I haven't seen any formal Microsoft documentation on using "Remote - Containers" extension with Podman, I followed the steps outlined here:
https://opensource.com/article/21/7/vs-code-remote-containers-podman
Thanks.


GH-392: Allow system admins to provide a block of text to display in output of /jira help

Summary

In system console, jira admin can specify extra help-text to be shown along with the output of command /jira help.
Ticket Link

Fixes https://github.com/mattermost/mattermost-plugin-jira/issues/392

closing this PR as the source branch is not from master


servicebroker: provisionservice

this commit is based on previous PR#42

Make sure you update the root README since it documents the unit test steps which have changed given your changes to your script definitions.

@qibobo I realize res.sendFile sends it every time, but how often is getCatalog really called? It is a memory vs speed tradeoff. I vote for less memory since it shouldn't be called that often. The downside is that we do need to verify the file once to make sure it is valid json.

Merging the current code but please address the new issues.


add method to remove unsupported thesauri form SH

Supported thesauri in both BPL & NYPL are pretty much uniform. It makes sense to create a method that will remove any other terms.

done in PR #3


Microsoft Purview Data Classification

Proposed name of the new command
puclassifiers
Description
Microsoft Purview Data Classification
Category
Microsoft 365
Url
https://compliance.microsoft.com/dataclassificationclassifiers

Thanks @lisaawengler this has been added now.


ja: Make docs/tutorials/stateful-application/cassandra.md follow v1.18 of the original text

This is a Feature Request

What would you like to be added
Update docs/tutorials/stateful-application/cassandra.md to follow v1.18 of the original (English) text.
Why is this needed
content/ja/docs/tutorials/stateful-application/cassandra.md is outdated.
Comments
/language ja
/good-first-issue
File to update
https://github.com/kubernetes/website/blob/dev-1.18-ja.1/content/ja/docs/tutorials/stateful-application/cassandra.md
Original
https://github.com/kubernetes/website/blob/fb6364d/content/en/docs/tutorials/stateful-application/cassandra.md
diff between translated and v1.18
https://gist.github.com/3a8a4c7b310dfab93bf31479499875d1
Note
Currently, we use dev-1.18-ja.1 branch. Please open a PR targeting the branch.
ref
https://kubernetes.io/ja/docs/contribute/localization/
If you have a question, feel free to ask us at slack.k8s.io #kubernetes-docs-ja channel.

/milestone 1.18-ja.1

/assign

/close


Greenkeeper/@angular devkit/build ng packagr 0.10.5

Codecov Report

Merging #34 into master will not change coverage.
The diff coverage is n/a.

@@          Coverage Diff           @@
##           master     #34   +/-   ##
======================================
  Coverage    90.4%   90.4%
======================================
  Files          27      27
  Lines         750     750
  Branches      151     151
======================================
  Hits          678     678
  Misses         72      72

Continue to review full report at Codecov.

Legend - Click here to learn more
Δ = absolute <relative> (impact), ø = not affected, ? = missing data
Powered by Codecov. Last update fbf083a...2b4b1e7. Read the comment docs.


feature request: open in a browser.

If the share option had 'open in a browser' or open with 'chrome' etc that would be great for the testing I am using this for.
As it stands pasting the URL from the clip board to chrome doesn't work as the text gets wrapped in single quotes at some point.

Could you provide an example for me please @peppertreeit ?


[stable/docker-registry] Add imagePullSecrets

What this PR does / why we need it:
add imagePullSecret to helm chart to get images from a private docker registry
Which issue this PR fixes (optional, in fixes #<issue number>(, fixes #<issue_number>, ...) format, will close that issue when PR gets merged): fixes #
get docker-registry image from a private registry
Special notes for your reviewer:

/assign @rendhalver

/ok-to-test

Good plan.
Thanks!

/lgtm


Release version 1.1.0 to NPM

Hi @maslianok,
Could you release the 1.1.0 to NPM so we can install with npm. Thanks.

I'm really sorry for this. Done


Mail from myself says “improperly forwarded” when writing to a mailing list

Which browser (+ version)?

Palemoon 27.7.1 (but I’d say it’s not relevant)

Which OS (+ version)?

Windows 7 32bit (idem)

Which layout mode?

Column mode (idem)

Which threading mode?

Conversation mode (idem)

Can you reproduce the problem each time?

Yes

Which url?

Not sure what to answer… https://mail.protonmail.com/inbox/?

What steps will reproduce the problem?

Have a mailing list address on which you have write permission— for privacy purposes I cannot disclose the address of the list I use
Send an email with any contents to that list
Wait a moment…
Check inbox (or spam) folder and find the copy of your message that went through the list

What is the expected result?
The received email should never go to the spam folder, and you shouldn’t be warned about the email being improperly forwarded.
What happens instead?
The received email sometimes goes to the spam folder, and you notice a red warning box containing this message:

This email seems to be from a ProtonMail address but came from outside our system and failed our authentication requirements. It may be spoofed or improperly forwarded!

Please provide any additional information below. Attach a screenshot if possible.

It's sort of a problem with mailing lists and DMARC in general that's not super-fixable.
https://blogs.msdn.microsoft.com/tzink/2015/05/28/solving-the-problem-of-dmarcs-incompatibility-with-mailing-lists-part-1/
We could change the the message when it's a mailing list but we shouldn't hide it entirely, because spammers can just put mailing list headers in their spam.
We could hide this message if the email is in the spam whitelist perhaps. Could still be issues with other clients reading the message.

Actually what I thought is a bug here, is the fact that the email comes from myself and ProtonMail should be able to recognize this case. Maybe by comparing message hashes client-side or something.
… But now I realize this might be overly complex, and wouldn’t be worth the development time put into it.
Closing the issue :)

Yeah, fundamentally this is sort of a 'standard' problem with DMARC (which we use for our domains) and mailing lists. Some reading if you'd like to learn more:
https://blogs.msdn.microsoft.com/tzink/2015/05/28/solving-the-problem-of-dmarcs-incompatibility-with-mailing-lists-part-1/


Issues with the latest release?

Ask your question
Hello!
I'm starting a new nuxt project where I need auth, so, according to their website, I installed this one just like the documentation says.
I'm running two issues, but it may be me (I just do not know what to look after):

When registering global middleware using those instructions:

export default defineNuxtConfig({
   modules: [
       [...],
       '@sidebase/nuxt-auth'
   ],
    auth: {
        globalAppMiddleware: true
    },
   [...]
});

the middleware does not seems to be registers. The nuxt inspector list only nuxt.validate, nothing else.
The second issue is with guest mode.
In my login page, I've got this config:

definePageMeta({
    auth: {
        unauthenticatedOnly: true,
        navigateAuthenticatedTo: '/user',
    }
});

Despite that, even being logged in, I'm never redirected. Maybe it is a consequence of the first one.
Any idea?
Additional information
No response

had the same issue, apprently the needs to be
globalAppMiddleware: {
    isEnabled: true //or is_enabled
}

I'm having issues too
I enabled the globalAppMiddleware using boolean and the object {isEnabled: true}
Created a simple route /dashboard/protected, and the protection is not being applied

Also, there is no JWT available, why? It doesn't seems to be mentioned
elsewhere in the doc, but I may have missed something...
From what I understand, JWT or session are two distinct modes, but I can't
see how or why I should use one or the other.
On Fri, 5 May 2023, 22:43 Willian Josefi, @.***> wrote:

I'm having issues too
I enabled the globalAppMiddleware using boolean and the object {isEnabled:
true}
Created a simple route /dashboard/protected, and the protection is not
being applied
—
Reply to this email directly, view it on GitHub
https://github.com/sidebase/nuxt-auth/issues/369#issuecomment-1536760032,
or unsubscribe
https://github.com/notifications/unsubscribe-auth/AAORHVPOKXOKN43B6KKUVMTXEVQ53ANCNFSM6AAAAAAXXB6IHQ
.
You are receiving this because you authored the thread.Message ID:
@.***>

Hey there 👋
Will have a look into this - please be aware that v0.6 is still a beta, use v0.5 for a smooth, tested experience if this is what you are looking for (:

Okay, lookedat this issue again - would one of you please provide:

a specific problem,
a reproduction for said problem?

Then I can actually help (: Other than that: Please keep in mind that v0.6 is still in beta, if you are looking for a stable experience use v0.5 please, thanks!

Instead of opening a new issue, this is a repo with a newly generated nuxt3 project and nuxt-auth v0.5.0.
https://github.com/imduchy/nuxt3-auth
I'm running into same problems. I registered the Auth0 provider and after clicking on sign in button, I'm able to complete the auth flow. However, protected pages are available even without an active session.
I tried to follow the example with a custom log in page but after logging-in, I was never redirected.
auth: {
  unauthenticatedOnly: true,
  navigateAuthenticatedTo: '/protected',
}

Nuxt version: 3.5.2
Node version: 16

@BracketJohn any updates on this, please?

https://github.com/sidebase/nuxt-auth/issues/369#issuecomment-1536242756

This was (another?) problem, but resolved + released via https://github.com/sidebase/nuxt-auth/pull/423
I'll still look into the other report about /protected not being protected :+1:

@BracketJohn I was curious if you had a chance look at it

Hi, I'm experiencing the same issue with 0.6.0-beta.5. I've checked the middlewared in<EMAIL_ADDRESS>and the logic seems correct to me. I tried using console.log to check if values such as status and metaAuth is correctly passed but it doesn't show up in the console.

@MuhammadM1998 Thanks for the investigation 💪
I updated the docs, to be more inline with what you described. This should make it more clear how to use the middleware.

@zoey-kaiser Glad to help 🙏  Thanks for the module!


Enhancements to the Immersive Experience 3D 👾 🍎 🥽

Here are the key changes I made:

I added the -defaultSize option to the immersive space.
Adding an SF Symbol icon made the button more visible.
I added an automatic immersive space opening when the view appears.
I improved the button styling and layout.

Now, you should:

See the 3D visualization automatically when you launch the app.
Have a more visible button to toggle the immersive view.
Switch between the window and immersive views using the button.

The immersive experience should start automatically, and you can use the button to toggle between views.

Video
https://github.com/user-attachments/assets/ea8f42c0-eb22-401f-965d-2f6894b4e1bc

What if we could use the ISS telemetry to superimpose in the actual 3d space the exact position of that tank relative to where I am on the plent right now?

What if we could use the ISS telemetry to superimpose in the actual 3d space the exact position of that tank relative to where I am on the planet right now?

It can be an expensive ( time cost ) improvement, but I like that.  👍🏻

I don't really have any way of reviewing this so I'm just going to trust your judgement on whether it's good to go. Go ahead and mash the merge button if so 😀

What if we could use the ISS telemetry to superimpose in the actual 3d space the exact position of that tank relative to where I am on the planet right now?

Just as a side note, the telemetry data doesn't have location data, just attitude, so we'd need to get the ISS's position from somewhere else. Absolutely doable though; Somebody on Hackernews mentioned they'd done something similar as pISSStream but also included location data so they could show which countries are "getting pissed on the most" (their words) 😀
Could show a giant AR toilet that's in the ISS's real position relative to you, pointed in the direction the ISS is pointing


strelka: add aarch64-linux support

Description of changes
Supersedes #157303.
Things done

Built on platform(s)

[ ] x86_64-linux
[x] aarch64-linux
[ ] x86_64-darwin
[ ] aarch64-darwin

For non-Linux: Is sandboxing enabled in nix.conf? (See Nix manual)

[ ] sandbox = relaxed
[ ] sandbox = true

[ ] Tested, as applicable:

NixOS test(s) (look inside nixos/tests)
and/or package tests
or, for functions and "core" functionality, tests in lib/tests or pkgs/test
made sure NixOS tests are linked to the relevant packages

[ ] Tested compilation of all packages that depend on this change using nix-shell -p nixpkgs-review --run "nixpkgs-review rev HEAD". Note: all changes have to be committed, also see nixpkgs-review usage
[x] Tested basic functionality of all binary files (usually in ./result/bin/)
24.05 Release Notes (or backporting 23.05 and 23.11 Release notes)

[ ] (Package updates) Added a release notes entry if the change is major or breaking
[ ] (Module updates) Added a release notes entry if the change is significant
[ ] (Module addition) Added a release notes entry if adding a new NixOS module

[x] Fits CONTRIBUTING.md.

Add a :+1: reaction to pull requests you find important.

Moving away from vendored boost has broken the build for me:
...
include/boost/math/tools/config.hpp:23:6: error: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [8;;https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp-Werror=cpp8;;]
cc1plus: all warnings being treated as errors
...

Oh, forgot to paste cmakeFlags.


Specific blade syntaxes are outputed as text

Hey there,
thanks for this really good package.
I use the rappasoft boilerplate wich add some blade extensions (url), but those extensions when used are outputed as plain text when minified.
Anyway to add those extensions to the minifier list ?

Make sure packages register extensions in the boot method, and that you put this service provider before others that have extensions to register. If you don't do this, their extensions just get discarded.

That was it. Thanks a lot.


Fixed zip file handling

Makes sure zips are extracted correctly (prevent double folder)

we should really switch to crc32 for zip files though, since it way faster than md5

Yeah, i dont know how to isolate commits, so uri path fix comes here instead

Okay, that uri fix destroys any hope of ever loading the game for people with many songs, so, removed.

Hey, could you update this to the new version I just pushed to master? And please stick to the code formatting the project already has.

Okay, this time it closed when trying to update the fork, i will just make a new pull thats ready to be accepted immediately.


Brainstorm: On the loading of pages within a view container and focus policies

When the OnboardingWizard is loaded, all pages within are all loaded. This has implications for tab functionality and accessibility features like screen readers.
If all pages are loaded, then by default; tabbing can go onto other pages that are not in view essentially making tabbing useless, and screenreader can go off the page, also making them useless.
It appears we have two options to address this:
Option A: Only load one page at a time
We can edit/choose containers that will only have one page loaded at a time. The action of continuing to the next page or going back to a previous page will be responsible for containing the logic that will allow for the correct animation to show.
The SwipeView documentation contains info on how to limit the amount of pages loaded, and

Option B: Make a hard boundary between pages
We can make hard boundaries between pages by playing around with focus policies (maybe): https://doc.qt.io/qt-6/qtquick-input-focus.html
I'm not so clear on how we would accomplish this one, but conceptually it's possible.

An option is to control the flow of focus with KeyNavigation attached properties. https://github.com/johnny9/gui-qml/commits/tab-focus-navigation. The downside to this is it can be very fragile and will require tests to prevent regression.

While playing with the KeyNavigation my initial thought for fixing this was some form of Option A where the SwipeViews are reimplemented with StackViews using animations. However, I haven't validated what the tab focus chain is like for StackView.


Update to puppeteer v2.0.0

PR created by bot:
https://github.com/buildkite/docker-puppeteer/pull/94

@toolmantim is this a priority? The docker image is one major version release behind puppeteer upstream and 5 minor releases behind.

Sorry those versions weren't being published properly. We've just published a new version, but no v2.0.0 I'm afraid — straight to v3.0.1, and fixed it up so the automated builds are working correctly again.

nice, thanks @toolmantim!


"Edit Post" Button/Link

I find it odd how Ghost has not yet implemented an "Edit Post" button or similar.
Do you think it could be implemented for the next version? It would be useful.
This would be on the post page, and would only show when you're logged in as an editor.

Here is a contributed work-around:
https://chrome.google.com/webstore/detail/ghost-edit-button/okakplkodjenjgaeehmlfcgaedngomac

For anyone else searching for this, here is a simple solution:
Create a bookmark in your browser that links to the following address:
javascript:window.location+='edit/';


Cannot start project with latest configuration - npm run dev fails to launch

What is the location of your example repository?
Private
Which package or tool is having this issue?
Hydrogen
What version of that package or tool are you using?
Templates > Skeleton > Latest as of 15th April 2024 (package.json below)
What version of Remix are you using?
^2.8.0
Steps to Reproduce

My project was working fine.
Decided to update package.json (and relevant files) to latest found in Templates > Skeleton.
Attempt to execute "npm run dev".
Failed to run / start local web server with absolutely no error.
Cannot diagnose error because the command prompt is exiting and providing no error info.  Like someone used a try catch next.
This project uses all of the latest configuration from the Skeleton > Template project
Have re-checked all local root files and updated the entry.client.tsx, entry.server.tsx and root.tsx
No errors in project

Package.json
{
  "name": "hydrogen",
  "private": true,
  "sideEffects": false,
  "version": "1.0.7",
  "type": "module",
  "scripts": {
    "build": "shopify hydrogen build --codegen",
    "dev": "shopify hydrogen dev --codegen",
    "preview": "npm run build && shopify hydrogen preview",
    "lint": "eslint --no-error-on-unmatched-pattern --ext .js,.ts,.jsx,.tsx .",
    "typecheck": "tsc --noEmit",
    "codegen": "shopify hydrogen codegen"
  },
  "browserslist": [
    "defaults"
  ],
  "prettier": "@shopify/prettier-config",
  "dependencies": {
    "@headlessui/react": "^1.7.2",
    "@headlessui/tailwindcss": "0.2.0",
    "@remix-run/react": "^2.8.0",
    "@remix-run/server-runtime": "^2.8.0",
    "@shopify/cli": "3.52.0",
    "@shopify/cli-hydrogen": "^8.0.0",
    "@shopify/hydrogen": "2024.4.0",
    "@shopify/remix-oxygen": "^2.0.4",
    "clsx": "^1.2.1",
    "cross-env": "^7.0.3",
    "graphql": "^16.6.0",
    "graphql-tag": "^2.12.6",
    "isbot": "^3.8.0",
    "react": "^18.2.0",
    "react-dom": "^18.2.0",
    "react-intersection-observer": "^9.4.1",
    "react-use": "^17.4.0",
    "schema-dts": "^1.1.0",
    "tiny-invariant": "^1.2.0",
    "typographic-base": "^1.0.4",
    "js-cookie": "3.0.5",
    "pdfmake": "0.2.10"
  },
  "devDependencies": {
    "@graphql-codegen/cli": "5.0.2",
    "@playwright/test": "^1.40.1",
    "@remix-run/dev": "^2.8.0",
    "@remix-run/eslint-config": "^2.8.0",
    "@shopify/hydrogen-codegen": "^0.3.0",
    "@shopify/mini-oxygen": "^3.0.0",
    "@shopify/eslint-plugin": "^44.0.0",
    "@shopify/oxygen-workers-types": "^4.0.0",
    "@shopify/prettier-config": "^1.1.2",
    "@tailwindcss/forms": "^0.5.3",
    "@tailwindcss/typography": "^0.5.9",
    "@total-typescript/ts-reset": "^0.4.2",
    "@types/eslint": "^8.4.10",
    "@types/react": "^18.2.22",
    "@types/react-dom": "^18.2.7",
    "cross-env": "^7.0.3",
    "eslint": "^8.20.0",
    "eslint-plugin-hydrogen": "0.12.2",
    "postcss": "^8.4.21",
    "postcss-import": "^15.1.0",
    "postcss-preset-env": "^8.2.0",
    "prettier": "3.2.4",
    "rimraf": "^3.0.2",
    "tailwindcss": "^3.3.0",
    "typescript": "^5.2.2",
    "postcss-nesting": "11.2.2",
    "prettier-plugin-tailwindcss": "0.5.11",
    "react-icons": "5.0.1",
    "@types/pdfmake": "0.2.9",
    "vite": "^5.1.0",
    "vite-tsconfig-paths": "^4.3.1"
  },
  "engines": {
    "node": ">=18.0.0"
  }
}

Expected Behavior

Run the command "npm run dev"
Local server development environment runs
Click on the localhost:3000 link to view website locally

Actual Behavior
PROBLEM 1 - The web development server does not load - command exits with no error (or anything at all) and back to where you can type in the next command.
Running the npm run dev command (shown below), the terminal in VSCode just exits without displaying an error.
PS C:\GitHub\XXXX\hydrogen\hydrogen> npm run dev

<EMAIL_ADDRESS>dev
shopify hydrogen dev --codegen

PS C:\GitHub\XXXX\hydrogen\hydrogen>
PROBLEM 2 - A new file is created called "vite.config.ts.timestamp-xxxx.mjs (where x is a timestamp).
The content of the vite config file that is automatically created (every time I run npm run dev) outputs the following...
// vite.config.ts
import { defineConfig } from "file:///C:/GitHub/XXX/hydrogen/hydrogen/node_modules/vite/dist/node/index.js";
import { hydrogen } from<EMAIL_ADDRESS>import { oxygen } from<EMAIL_ADDRESS>import { vitePlugin as remix } from<EMAIL_ADDRESS>import tsconfigPaths from "file:///C:/GitHub/XXX/hydrogen/hydrogen/node_modules/vite-tsconfig-paths/dist/index.mjs";
var vite_config_default = defineConfig({
  plugins: [
    hydrogen(),
    oxygen(),
    remix({
      presets: [hydrogen.preset()],
      future: {
        v3_fetcherPersist: true,
        v3_relativeSplatPath: true,
        v3_throwAbortReason: true
      }
    }),
    tsconfigPaths()
  ]
});
export {
  vite_config_default as default
};
// then a base64 mapping with no useful information inside.

I cannot view my website locally anymore.  I cannot develop my app.
When I tried to run npm run dev with debug attached, there is a small popup that shows "Debug adapter process has terminated unexpectedly".
cli-hydrogen is 8.0.0 (based on the version number - most likely to be the culprit).
It should at least give an error e.g. where about it encountered the error.
Now cannot do anything on the project.  Any help appreciated or possibly indicate how I diagnose this critical error.
PS I've really been enjoying developing my Hydrogen project!
Edit: Stack Overflow issue submitted here

@danabdn From the looks of it, I think your project may be missing some vite setup. Run h2 setup vite. Afterwards, make sure to run npm install (May need to clean out node_modules and/or package-lock.json)

Step forward - to resolve the above error, you can rename postcss.config.js to postcss.config.cjs (or possibly just delete the file).
Reference - https://github.com/QwikDev/qwik/issues/836
The web development server text now appears in the CLI :-)
However, when launching the web dev server in a browser, the following message is displayed on black background with white text.
ReferenceError: exports is not defined
AND /graphiql results in the same error message.

As mentioned by others, I would recommend reverting back to your original project, then do h2 upgrade to update dependencies plus h2 setup vite to start using Vite.
This last command already renames your postcss.config.js to postcss.config.cjs and it does the same for .eslintrc.js.
Otherwise, if you prefer to do it manually, here's what we do in the command to have a reference of what you need to change: https://github.com/Shopify/hydrogen/blob/main/packages/cli/src/commands/hydrogen/setup/vite.ts#L52

However, when launching the web dev server in a browser, the following message is displayed on black background with white text.

This is unrelated to the first issue. The problem here is that typographic-base uses CJS internally and you need to tell Vite to optimize it for ESM. You can see here how we do it in the demo-store: https://github.com/Shopify/hydrogen-demo-store/blob/main/vite.config.ts#L23


[chat] Remove unused parameters

Description
Brief description of what this PR is about

If this change is a backward incompatible change, why must this change be made?
Interesting edge cases to note here

Hi
When is the next release planned?
Is there a 'nightly' build?
What is the workaround for this issue for the current stable build?
Thank you!

By the way. I see that the change was made in relation to 'chat', please be aware that I'm seeing the same errors with the base model as well (meta-llama/Llama-2-7b-hf)

@yaronr
You can find night image: https://hub.docker.com/layers/deepjavalibrary/djl-serving/lmi-nightly/images/sha256-c8c248b7a797b65fff3c18007749ee6fb1a1fa1e42285de68f7c2b91b8fa70b2?context=explore


Read auth_data_len from InitialHandshake packet instead of hard code

Now
When Fake Slave receive initialHandshake packet from Master, it'll decodes this packet. The current implementation uses hard-coded methods to obtain auth_data_part_2.
Change
But actually we can get auth_data_len from initHandshake packet.  We can use the same method to get auth_plugin_name(ref to MySQL Doc)
Test
I've tested this change with my local MySQL, it's ok

Btw, when syncer receive an EOF Packet, it's means that user set 'BINLOG_DUMP_NON_BLOCK' flag in COM_BINLOG_DUMP command and there is no more binlog event now. master will send this Packet instead of blocking


Investigate high cpu usage with reload API call and Hashicorp vault

High CPU usage has been observed when reload API call (once a day) with keys loaded from Hashicorp. The CPU usage doesn't come down.
vCPU 2 - 4GB
Web3Signer - 1GB mx
1000-2000 keys.

Unable to reproduce.

Used https://github.com/usmansaleem/web3signer_loadtest to generate blocksigning requests
Used https://github.com/usmansaleem/web3signer-hashicorp-loader to generate and load 1000 keys in Hashicorp instance, followed by 200 keys to make total of 2000 keys loaded.
Called curl -X POST "http://192.168.1.xx:9000/reload" -H  "accept: */*" -d "" after each load of keys
Connected Mission Control with Web3Signer and observed CPU usage. CPU usage was within expected parameters.


Can't set x:Name property to xfx Combobox

Bug

Version Number of Control: 1.0.4
Device Tested On: YU Yuphoria
Xamarin Forms Version: <IP_ADDRESS>
Simulator Tested On:

Expected Behavior
Set x:Name property to Combobox, so I can access the control in the codebehind xaml.cs page.
Actual Behavior
Setting x:Name property results in the following error
_Error: Sampling.Home.xaml.g.cs: error CS0400: The type or namespace name 'Xfx' could not be found in the global namespace (are you missing an assembly reference?)_
Steps to reproduce the Behavior
Feature Request:
Please fill in what you would like

Same error here, any news?

I cannot reproduce this. Can you please send me a repro?

I tested again to reproduce this error and could not. If you continue to have this issue, please re-open this ticket and include a reproduction either via ZIP or in a github repo.


OneShotSource requestIdleCallback optimization

This optimization allows the browser to tell Tone a more opportune time to garbage collect during onended on OneShotSource. Otherwise, the 1 second timeout can trigger at an inopportune time.
It should be backwards compatible with browsers that don't support requestIdleCallback
Note about formatting: I think a version of prettier may need to be defined because this is what's outputted when using the config in the package.json on my machine. The actual changes are here. I think it should be a dev dependency? And possibly a part of the linting command/s?

Here's an example of the timers firing on a crowded frames:

awesome thanks!


Should reclaimChild need to check the child is not in _pendingChildren and _children?

Because when child is in pendingChildren or children, the reclaimChild can still be called and this will cause record issue.

That makes sense, right know it will probably produce an inconsistency. Will fix soon.

Added protection on this PR
Thanks!


error: faidx could not get contig length for contig 22

Hello,
I got a following error:
error: faidx could not get contig length for contig 22
I am running this command:
python3 nanopolish_makerange.py paternal_CYP2D6.fa | parallel --results nanopolish.results -P 8 nanopolish variants --consensus -o polished.{1}.vcf -w {1} -r /nanopore/reference_sequence/CYP2D6_refseq.fasta -b aln_paternal_CYP2D6_sorted.bam -g paternal_CYP2D6.fa -t 4 --min-candidate-frequency 0.1 -w "22:42512501-42536812"
I am not sure why this could not get contig length.

There are a few possible issues here:

You passed paternal_CYP2D6.fa into makerange, but then provided the window option anyway (-w). makerange will output a list of windows to run over. You should tell parallel to fill in the window with -w {1} (see the README.md) for the full command
the -r option doesn't match what you passed to makerange (CYP2D6_refseq.fasta vs paternal_CYP2D6.fa).

Jared

Thanks. I figured out the issue by myself. The reference sequence should not be one line sequence. It should break to multiple lines with 100 base width for each line. Then it can read the length.


Add local dev instructions to perfdash readme

This updates the readme with specific commands on how to start perfdash
locally. Commit also includes minor style changes to the readme code (line
wrapping, extra newlines etc).
Testing:

ran perfdash according to the readme

fixes #585

/assign @mborsz

/lgtm

I don't have approval power here.
@krzysied, could you review, please?

/approve


[New Feature Request] Will support horizontal mode ?

Hi, this wheel picker widget helped me a lot. But I also need it to be horizontally displayed. Do you have any plan to support it ?
Thanks.

Hey @ZhiwenLuoAllIn,
Thank you for using this package, i'm glad you found it useful.
I will absolutely add it in the next version, currently I am a bit busy so it might take me a while.
If you want you can also add this feature, the current code is quite simple and intuitive so it shouldn't take long to add it.
I will make sure to keep you updated in the meantime.

Hey @ZhiwenLuoAllIn,
I wanted to let you know that I've updated the package and added support for the horizontal scroll feature.
Feel free to check out the latest version and confirm if everything is working as expected. If you have any further feedback or questions, please don't hesitate to reach out.
Hope it helps!

I'm closing this issue as the feature has been added. If you come across any issues with the implementation, please let me know.


[SILGen] eliminate SILGen for var parameters

What's in this pull request?

var parameter is no longer a thing in Swift 3. So we can remove the SILGen for it.
Resolved bug number: (SR-)

Before merging this pull request to apple/swift repository:

[ ] Test pull request on Swift continuous integration.

Triggering Swift CI
The swift-ci is triggered by writing a comment on this PR addressed to the GitHub user @swift-ci. Different tests will run depending on the specific comment that you use. The currently available comments are:
Smoke Testing
    Platform     | Comment
    ------------ | -------------
    All supported platforms     | @swift-ci Please smoke test
    OS X platform               | @swift-ci Please smoke test OS X platform
    Linux platform              | @swift-ci Please smoke test Linux platform

Validation Testing
    Platform     | Comment
    ------------ | -------------
    All supported platforms     | @swift-ci Please test
    OS X platform               | @swift-ci Please test OS X platform
    Linux platform              | @swift-ci Please test Linux platform

Note: Only members of the Apple organization can trigger swift-ci.

Done.

@swift-ci Please test and merge

Thanks!

@swift-ci Please test

Failing tests are failing for every pull request. Safe to assume it's unrelated.


French Translation index.html

Translation of visible text of the page.

You closed it immediately again? On purpose?

Hello, sorry for inconvenience , i am newbie on github... i will RTFM
before doing my translation :-)
Thank you for that code, that's exactly that tool i want to explain
people the importance of good passwords.
But, my public is french and low tech, so i started to translate it on
my own.
Le 3 juin 2016 16:26:28 GMT+02:00, Rene Schwietzke
<EMAIL_ADDRESS>a écrit :
You closed it immediately again? On purpose?

—
You are receiving this because you modified the open/close state.
Reply to this email directly, view it on GitHub
<https://github.com/rschwietzke/yetanotherpasswordmeter/pull/5#issuecomment-223593403>,
or mute the thread
<https://github.com/notifications/unsubscribe/ANqwx0ljkzyAVqZ7stqMJZHKiqD9SCsaks5qIDmUgaJpZM4ItlO9>.

No problem. You are very welcome. My GIT knowledge is good, but my JavaScript knowledge is average, hence the code has much room for improvement including a good way to localize things.


Proxy Settings

I think that it is worth mentioning that Arc does not support authenticated proxy and mention how that would look like. Many customers have this use case

Document Details
⚠ Do not edit this section. It is required for learn.microsoft.com ➟ GitHub issue linking.

ID: 14a66a45-7f5b-b9c4-c675-bd2cc963b44d
Version Independent ID: 253cc884-5a70-c313-67c7-68f42b6e44c3
Content: Define Azure Monitor Agent network settings - Azure Monitor
Content Source: articles/azure-monitor/agents/azure-monitor-agent-data-collection-endpoint.md
Service: azure-monitor
Sub-service: agents
GitHub Login: @guywi-ms
Microsoft Alias: guywild

@lanicolas
Thanks for your feedback! We will investigate and update as appropriate.

@lanicolas - Thanks again for bringing this to our attention. We have added this to our backlog, and it will be picked up based on priority and it will be live once it's merged.  We will now proceed to close this thread. If there are further questions regarding this matter, please tag me in your reply. We will gladly continue the discussion and we will reopen the issue.


Fix Anthropic Bedrock support

Why are these changes needed?
The current implementation of AnthropicBedrock as created by @makkzone here does not properly add the AWS variables to the openai_config. Resulting in the following error:
Traceback (most recent call last):
  File "/Applications/PyCharm.app/Contents/plugins/python/helpers/pydev/pydevd.py", line 1551, in _exec
    pydev_imports.execfile(file, globals, locals)  # execute the script
  File "/Applications/PyCharm.app/Contents/plugins/python/helpers/pydev/_pydev_imps/_pydev_execfile.py", line 18, in execfile
    exec(compile(contents+"\n", file, 'exec'), glob, loc)
  File "autogen/autogen_test.py", line 43, in <module>
    classifier = ConversableAgent(
  File "autogen/agentchat/conversable_agent.py", line 159, in __init__
    self._validate_llm_config(llm_config)
  File "autogen/agentchat/conversable_agent.py", line 263, in _validate_llm_config
    self.client = None if self.llm_config is False else OpenAIWrapper(**self.llm_config)
  File "autogen/oai/client.py", line 422, in __init__
    self._register_default_client(config, openai_config)  # could modify the config
  File "autogen/oai/client.py", line 501, in _register_default_client
    client = AnthropicClient(**openai_config)
  File "autogen/oai/anthropic.py", line 114, in __init__
    raise ValueError("API key or AWS credentials are required to use the Anthropic API.")
ValueError: API key or AWS credentials are required to use the Anthropic API.

This change introduces the _configure_openai_config_for_bedrock method to include the necessary AWS variables (aws_access_key, aws_secret_key, aws_session_token, and aws_region) in openai_config if no api_key is present in the config and the api_type startswith anthropic. This ensures that the AnthropicBedrock client can be set correctly and function as expected.
Related PR number
https://github.com/microsoft/autogen/pull/3103
Related issue number
Closes #1234
Checks

[x] I've included any doc changes needed for https://microsoft.github.io/autogen/.
[ ] I've added tests (if relevant) corresponding to the changes introduced in this PR.
[ ] I've made sure all auto checks have passed.

@joris-swapfiets can you remove the check for the aws_session_token, i think it is not necessary(Optional)

@Hk669 Done!

@Hk669 Done!

also from the AnthropicClient, where there is a check for the session_key. thanks

@microsoft-github-policy-service agree

@Hk669 Did you mean the check I just commited or something else?

@Hk669 Did you mean the removal of the check I just committed or removal of all instances of the aws_session_token from AnthropicClient

you can use this for reference.

@Hk669 Removed it based on your reference

@Hk669 Removed it based on your reference

can you run pre-commit to fix the formatting check.

Running pre-commit now

Codecov Report
Attention: Patch coverage is 14.28571% with 6 lines in your changes missing coverage. Please review.

Project coverage is 37.74%. Comparing base (6279247) to head (9f60a7f).
Report is 42 commits behind head on main.

Files
Patch %
Lines

autogen/oai/client.py
14.28%
6 Missing :warning:

Additional details and impacted files
@@            Coverage Diff             @@
##             main    #3210      +/-   ##
==========================================
+ Coverage   32.90%   37.74%   +4.83%
==========================================
  Files          94       96       +2
  Lines       10235    10608     +373
  Branches     2193     2439     +246
==========================================
+ Hits         3368     4004     +636
+ Misses       6580     6259     -321
- Partials      287      345      +58

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this should fix the issue #3198

I double checked that my access key, secret key and session token are working using AnthropicBedrock module. But I get the following error after I use autogen.

PermissionDeniedError                     Traceback (most recent call last)
Cell In [28], line 22
15 assistant = autogen.AssistantAgent("assistant", llm_config={"config_list": config_list})
17 support_request = {
18         "content": "I am unable to install the latest update of the software.",
19         "role": "user"
20     }
---> 22 assistant.generate_reply(messages=[support_request])
File ~/Library/Python/3.9/lib/python/site-packages/autogen/agentchat/conversable_agent.py:1973, in ConversableAgent.generate_reply(self, messages, sender, **kwargs)
1971     continue
1972 if self._match_trigger(reply_func_tuple["trigger"], sender):
-> 1973     final, reply = reply_func(self, messages=messages, sender=sender, config=reply_func_tuple["config"])
1974     if logging_enabled():
1975         log_event(
1976             self,
1977             "reply_func_executed",
(...)
1981             reply=reply,
1982         )
File ~/Library/Python/3.9/lib/python/site-packages/autogen/agentchat/conversable_agent.py:1341, in ConversableAgent.generate_oai_reply(self, messages, sender, config)
1339 if messages is None:
1340     messages = self._oai_messages[sender]
...
(...)
1053     stream_cls=stream_cls,
1054 )
PermissionDeniedError: Error code: 403 - {'message': 'The security token included in the request is invalid.'}

@billdoors  Can you post your code which you tried to execute?

@makkzone code is posted in this issue report: https://github.com/microsoft/autogen/issues/3295


Multistage (target) Dockerfiles

🚀 Feature Request
See if we can make our development experience a little easier, if this functions as expected, we should be able to test (against any database of our choice) through docker instead of relying on slqite3 as our test database (which is not ideal)

After further research, docker compose does not support a --target flag like docker does. So we could have a single dockerfile with multiple targets like the following.
From python3.x as build
...

From build as test
...

From build as dev
...

But then to take advantage of this, we would need to create three separate docker-compose files (.yaml, test.yaml, dev.yaml) which does not really help our developer experience.

The way I have it setup now...
From python3.x as build
...

From builder as test
...

From builder as dev
...

From builder as production
...


cache best runs in memory

Right now, every new "best run" gets pickled and written to disk. It would be cool if you could write the pickled objects to a cache in memory and then only sink to a file when the run ends or is interrupted.

I am going to work on this.


ByConity server leader election

Question
Hello, I have a ByConity kubernetes deployment from default helm values. This deploys byconity-server statefulset with 2 replicas. When i go into the pod logs of byconity-server-0 I see this error:
<Error> CnchServerManager: More than one server in cluster without leader-election is not supported now, stop refreshTopology, psm: byconity-server

How do I activate the leader election properly?

Currently multi replicas of byconity-server support is experimental.
Personally, I suggest you can try this pre-release solution https://github.com/ByConity/ByConity/pull/757, according to pull the branch "sync_storage_election" and deploy following https://github.com/ByConity/ByConity/blob/ad2ad4677bf2793ffadf98fbcf33896fe8240202/doc/ha_support.md#2-i-want-to-use-this-feature-and-want-to-increase-or-decrease-the-replicas-count.

Currently multi replicas of byconity-server support is experimental.
Personally, I suggest you can try this pre-release solution #757, according to pull the branch "sync_storage_election" and deploy following https://github.com/ByConity/ByConity/blob/ad2ad4677bf2793ffadf98fbcf33896fe8240202/doc/ha_support.md#2-i-want-to-use-this-feature-and-want-to-increase-or-decrease-the-replicas-count.

It is already merged into master branch. Feel free to use it or raise the issue you meet.

Thank you for your confirmation


Sort "Publications Requiring Preferred Version Check" list by journal/publisher

Manually checking the "preferred version" for an article requires identifying the journal that published the article and reviewing the journal's policy on author article sharing. Often, journals from a single publisher have similar or identical policies.
Organizing the list of publications that require this check according to the journal and/or the publisher would make this process more efficient. Journal data lives in two places in RMD, and RMD often doesn't have publisher data at all, so this could be tricky. One way to approximate this would be to sort or group the items according to DOI prefix (and possibly then according to the structure of the rest of the DOI, which can indicate the journal).

Let's do #965 instead.


fix(helia-coord): Updating to v1.5.14

:tada: This PR is included in version 5.4.7 :tada:
Your semantic-release bot :package::rocket:


Implement CreditCard Cfgu Type

Suggestion
Add a CreditCard type to the Cfgu type system of Configu.
Using type: CreditCard in a ConfigSchema should enforce a valid Credit Card number (amex, visa, mastercard, etc..) as a config value at upsert or eval.
Motivation
I added it a week ago as mentioned in #142. But I noticed that the structure of this repository has been changed and the CreditCard Cfgu type is not present in the .cfgu.json file.
Context
No response

@rannn505 @davidmeirlevy , please tell me you need to add it. So that I can generate a PR for it.