from __future__ import print_function
import fitsio
from legacypipe.common import LegacySurveyData
from astrometry.util.fits import fits_table

def add_depth_tag(survey, brick, overwrite=True):
    outfn = survey.find_file('tractor', brick=brick, output=True)
    if os.path.exists(outfn) and not overwrite:
        print('Exists:', outfn)
        return
    fn = survey.find_file('tractor', brick=brick)
    if not os.path.exists(fn):
        print('Input does not exist:', fn)
        return
    T = fits_table(fn, lower=False)
    primhdr = fitsio.read_header(fn)
    hdr = fitsio.read_header(fn, ext=1)
    print('Read', len(T), 'from', fn)
    T.decam_depth    = np.zeros((len(T), len(survey.allbands)), np.float32)
    T.decam_galdepth = np.zeros((len(T), len(survey.allbands)), np.float32)
    bands = 'grz'
    ibands = [survey.index_of_band(b) for b in bands]
    ix = np.clip(np.round(T.bx).astype(int), 0, 3599)
    iy = np.clip(np.round(T.by).astype(int), 0, 3599)
    for iband,band in zip(ibands, bands):
        fn = survey.find_file('depth', brick=brick, band=band)
        if os.path.exists(fn):
            print('Reading', fn)
            img = fitsio.read(fn)
            T.decam_depth[:,iband] = img[iy, ix]
        else:
            print('Did not find depth file:', fn)

        fn = survey.find_file('galdepth', brick=brick, band=band)
        if os.path.exists(fn):
            print('Reading', fn)
            img = fitsio.read(fn)
            T.decam_galdepth[:,iband] = img[iy, ix]
        else:
            print('Did not find galdepth file:', fn)

    for s in [
        'Data product of the DECam Legacy Survey (DECaLS)',
        'Full documentation at http://legacysurvey.org',
        ]:
        primhdr.add_record(dict(name='COMMENT', value=s, comment=s))

    with survey.write_output('tractor', brick=brick) as out:
        # Yuck, all this to get the units right
        fits = fitsio.FITS(out.fn, 'rw', clobber=True)
        fits.write(None, header=primhdr)
        cols = T.get_columns()
        units = []
        for i in range(1, len(cols)+1):
            u = hdr.get('TUNIT%i' % i, '')
            units.append(u)
        # decam_depth units
        fluxiv = '1/nanomaggy^2'
        units[-2] = fluxiv
        units[-1] = fluxiv
        fits.write([T.get(c) for c in cols], names=cols, header=hdr,
                   units=units)
        fits.close()
        print('Wrote', out.fn)

if __name__ == '__main__':
    import sys
    import argparse
    
    parser = argparse.ArgumentParser()
    parser.add_argument('--survey-dir', type=str, default=None,
                        help='Override the $LEGACY_SURVEY_DIR environment variable')
    parser.add_argument('-d', '--outdir', help='Set output base directory',
                        default='tractor2')
    opt = parser.parse_args()

    survey = LegacySurveyData(survey_dir=opt.survey_dir,
                              output_dir=opt.outdir)

    bricks = survey.get_bricks()
    bricks.cut(bricks.dec > -25)
    bricks.cut(bricks.dec <  40)

    ## HACK -- cut to COSMOS
    #bricks.cut((np.abs(bricks.ra - 150) < 2) *
    #           (np.abs(bricks.dec - 2.2) < 2))
    #print('Cut to', len(bricks), 'bricks near COSMOS')

    # Note to self: don't bother multiprocessing this; I/O bound
    for brick in bricks.brickname:
        add_depth_tag(survey, brick, opt.outdir)


        
    # Add has_[grz] tags and cut to bricks that exist in DR2.
    if False:
        bricks.nobs_med_g = np.zeros(len(bricks), np.uint8)
        bricks.nobs_med_r = np.zeros(len(bricks), np.uint8)
        bricks.nobs_med_z = np.zeros(len(bricks), np.uint8)
        bricks.nobs_max_g = np.zeros(len(bricks), np.uint8)
        bricks.nobs_max_r = np.zeros(len(bricks), np.uint8)
        bricks.nobs_max_z = np.zeros(len(bricks), np.uint8)
        bricks.in_dr2 = np.zeros(len(bricks), bool)

        for ibrick,brick in enumerate(bricks.brickname):

            fn = '/project/projectdirs/desiproc/dr2/tractor/%s/tractor-%s.fits' % (brick[:3], brick)
            bricks.in_dr2[ibrick] = os.path.exists(fn)

            dirnm = '/project/projectdirs/desiproc/dr2/coadd/%s/%s' % (brick[:3], brick)
            for band in 'grz':
                fn = os.path.join(dirnm, 'legacysurvey-%s-nexp-%s.fits.gz' % (brick, band))
                if not os.path.exists(fn):
                    continue
                N = fitsio.read(fn)
                mn = np.min(N)
                md = np.median(N)
                mx = np.max(N)
                print('Brick', brick, 'band', band, 'has min/median/max nexp', mn,md,mx)
                bricks.get('nobs_med_%s' % band)[ibrick] = md
                bricks.get('nobs_max_%s' % band)[ibrick] = mx

        bricks.writeto('legacysurvey-brick-dr2-a.fits')
        mxobs = reduce(np.logical_or, [bricks.nobs_max_g, bricks.nobs_max_r, bricks.nobs_max_r])
        assert(np.all(mxobs > 0 == bricks.in_dr2))
        bricks.cut(mxobs > 0)
        bricks.delete('in_dr2')
        print(len(bricks), 'bricks with coverage')
        bricks.writeto('legacysurvey-brick-dr2.fits')

        sys.exit(0)




@@ -38,22 +38,51 @@
 %0Aimport 
-fitsio
+os%0Aimport fitsio%0Aimport numpy as np
 %0Afrom le

add missing imports