from distutils.core import setup
from distutils.extension import Extension
from Cython.Distutils import build_ext
import numpy as np

ext_modules = [Extension('fiber_properties.filter_image',
                         ['fiber_properties/filter_image.pyx'],
                         include_dirs=[np.get_include()])]
cmdclass = {'build_ext': build_ext}

setup(name='fiber_properties',
      version='1.0',
      author='Ryan Petersburg',
      author_email='ryan.petersburg@yale.edu',
      description='Image Analysis for Fiber Characterization Station',
      license='MIT',
      url='https://github.com/rpetersburg/fiber_properties',
      packages=['fiber_properties'],
      cmdclass=cmdclass,
      ext_modules=ext_modules
     )
@@ -132,16 +132,18 @@
 s np%0D%0A%0D%0A
+# 
 ext_modu
@@ -189,24 +189,26 @@
 er_image',%0D%0A
+# 
             
@@ -256,24 +256,26 @@
 age.pyx'%5D,%0D%0A
+# 
             
@@ -322,16 +322,34 @@
 e()%5D)%5D%0D%0A
+ext_modules = %5B%5D%0D%0A
 cmdclass

change setup.py for median filter removal