Use broad peaks for ATAC-seq calling.
Use broad peaks for ATAC-seq calling.

There are conflicting recommendations, but for the most part folks
are using broad peaks for calling ATAC-seq peaks.

lbeltrame/bcbio-nextgen,vladsaveliev/bcbio-nextgen,chapmanb/bcbio-nextgen,lbeltrame/bcbio-nextgen,lbeltrame/bcbio-nextgen,a113n/bcbio-nextgen,vladsaveliev/bcbio-nextgen,vladsaveliev/bcbio-nextgen,chapmanb/bcbio-nextgen,a113n/bcbio-nextgen,a113n/bcbio-nextgen,chapmanb/bcbio-nextgen