Added option for users to specifiy half-open (1-based) return value for BamAlignment::GetEndPosition().  By default, returns 0-based coordinate after recent modification.
Added option for users to specifiy half-open (1-based) return value for BamAlignment::GetEndPosition().  By default, returns 0-based coordinate after recent modification.

SANBI-SA/bamtools,pezmaster31/bamtools,sksaskrobinsons/code,kdmurray91/bamtools,kdmurray91/bamtools,iontorrent/bamtools,boratonAJ/bamtools,domibel/bamtools,pezmaster31/bamtools,domibel/bamtools,pezmaster31/bamtools,sksaskrobinsons/code,pezmaster31/bamtools,boratonAJ/bamtools,iontorrent/bamtools,SANBI-SA/bamtools