change to use a.allele=tva.allele to a.allele=IF(tva.substrand_reversed_flag,tra.rev_allele, tra.allele), also get rid of pop_id=0 in loading other allele bit
change to use a.allele=tva.allele to a.allele=IF(tva.substrand_reversed_flag,tra.rev_allele, tra.allele), also get rid of pop_id=0 in loading other allele bit

Ensembl/ensembl-variation,dbolser-ebi/ensembl-variation,dbolser/ensembl-variation,dbolser-ebi/ensembl-variation,dbolser-ebi/ensembl-variation,willmclaren/ensembl-variation,Ensembl/ensembl-variation,willmclaren/ensembl-variation,Ensembl/ensembl-variation,willmclaren/ensembl-variation,dbolser/ensembl-variation,dbolser/ensembl-variation,Ensembl/ensembl-variation,willmclaren/ensembl-variation,willmclaren/ensembl-variation,dbolser/ensembl-variation,Ensembl/ensembl-variation