Export reference genome as uppercase even if it is softmasked
Export reference genome as uppercase even if it is softmasked

johnwallace123/dx-toolkit,dnanexus/dx-toolkit,johnwallace123/dx-toolkit,olegnev/dx-toolkit,andyshinn/dx-toolkit,jhuttner/dx-toolkit,dnanexus/dx-toolkit,dnanexus/dx-toolkit,johnwallace123/dx-toolkit,johnwallace123/dx-toolkit,jhuttner/dx-toolkit,dnanexus/dx-toolkit,dnanexus/dx-toolkit,olegnev/dx-toolkit,andyshinn/dx-toolkit,johnwallace123/dx-toolkit,andyshinn/dx-toolkit,olegnev/dx-toolkit,olegnev/dx-toolkit,olegnev/dx-toolkit,dnanexus/dx-toolkit,johnwallace123/dx-toolkit,dnanexus/dx-toolkit,olegnev/dx-toolkit,jhuttner/dx-toolkit,andyshinn/dx-toolkit,jhuttner/dx-toolkit,andyshinn/dx-toolkit,olegnev/dx-toolkit,jhuttner/dx-toolkit,johnwallace123/dx-toolkit,jhuttner/dx-toolkit,jhuttner/dx-toolkit,andyshinn/dx-toolkit,dnanexus/dx-toolkit,olegnev/dx-toolkit,andyshinn/dx-toolkit,jhuttner/dx-toolkit,andyshinn/dx-toolkit,johnwallace123/dx-toolkit