Made run script run from the root allosystem dir which simplifies using relative paths in files
Made run script run from the root allosystem dir which simplifies using relative paths in files

AlloSphere-Research-Group/AlloSystem,AlloSphere-Research-Group/AlloSystem,AlloSphere-Research-Group/AlloSystem,AlloSphere-Research-Group/AlloSystem,AlloSphere-Research-Group/AlloSystem