Change dorothea-py and progeny-py to decoupler (#2186)
Change dorothea-py and progeny-py to decoupler (#2186)

The packages dorothea-py and progeny-py are now deprecated, instead one should use decoupler (https://github.com/saezlab/decoupler-py). It contains both prior knowledge resources plus many more since it integrates the meta-resource OmniPath, and it also contains many footprint enrichment methods instead of a fixed one.
theislab/scanpy,theislab/scanpy