Updating output of PopulateReactions module
Updating output of PopulateReactions module

The species names (when listed with their thermochemistry, when listed in a
pathReaction, and when listed in a pdepreaction) were not consistent.  This
commit fixes the inconsistency.

nyee/RMG-Java,ReactionMechanismGenerator/RMG-Java,keceli/RMG-Java,nyee/RMG-Java,keceli/RMG-Java,rwest/RMG-Java,KEHANG/RMG-Java,jwallen/RMG-Java,connie/RMG-Java,KEHANG/RMG-Java,nyee/RMG-Java,keceli/RMG-Java,enochd/RMG-Java,jwallen/RMG-Java,jwallen/RMG-Java,jwallen/RMG-Java,keceli/RMG-Java,connie/RMG-Java,keceli/RMG-Java,enochd/RMG-Java,faribas/RMG-Java,KEHANG/RMG-Java,ReactionMechanismGenerator/RMG-Java,faribas/RMG-Java,rwest/RMG-Java,ReactionMechanismGenerator/RMG-Java,faribas/RMG-Java,KEHANG/RMG-Java,connie/RMG-Java,KEHANG/RMG-Java,enochd/RMG-Java,ReactionMechanismGenerator/RMG-Java,connie/RMG-Java,enochd/RMG-Java,rwest/RMG-Java,nyee/RMG-Java,jwallen/RMG-Java,jwallen/RMG-Java,KEHANG/RMG-Java,connie/RMG-Java,enochd/RMG-Java,rwest/RMG-Java,faribas/RMG-Java,nyee/RMG-Java,nyee/RMG-Java,ReactionMechanismGenerator/RMG-Java,keceli/RMG-Java,enochd/RMG-Java,rwest/RMG-Java