changed deprecated flags in run_mixcr.py for compatibility with post-2.0 versions of MiXCR
changed deprecated flags in run_mixcr.py for compatibility with post-2.0 versions of MiXCR

jaeddy/bripipetools,BenaroyaResearch/bripipetools,jaeddy/bripipetools,jaeddy/bripipetools,BenaroyaResearch/bripipetools,jaeddy/bripipetools,BenaroyaResearch/bripipetools,BenaroyaResearch/bripipetools