Added --strandSpecific option to produce strand-specific counts. This allows CHH methylation to be tabulated; in fact it is necessary in order to run CHH methylation. Closes #18.
Added --strandSpecific option to produce strand-specific counts. This allows CHH methylation to be tabulated; in fact it is necessary in order to run CHH methylation. Closes #18.

PeteHaitch/methtuple,PeteHaitch/methtuple,PeteHaitch/methtuple