Include residue numbering in Topology.to_openmm() and from_openmm()
Include residue numbering in Topology.to_openmm() and from_openmm()

mdtraj/mdtraj,dwhswenson/mdtraj,rmcgibbo/mdtraj,dwhswenson/mdtraj,gph82/mdtraj,jchodera/mdtraj,dwhswenson/mdtraj,mdtraj/mdtraj,jchodera/mdtraj,jchodera/mdtraj,rmcgibbo/mdtraj,jchodera/mdtraj,gph82/mdtraj,mattwthompson/mdtraj,mattwthompson/mdtraj,rmcgibbo/mdtraj,mattwthompson/mdtraj,mdtraj/mdtraj,mattwthompson/mdtraj,gph82/mdtraj