corrected error in getting gapcosts when using tblastx. get_params now checks to see what program is being run. changed archaic and confusing cn and bn ids to coge_radio and ncbi_radio, respectively.
corrected error in getting gapcosts when using tblastx. get_params now checks to see what program is being run. changed archaic and confusing cn and bn ids to coge_radio and ncbi_radio, respectively.

LyonsLab/coge,asherkhb/coge,LyonsLab/coge,LyonsLab/coge,LyonsLab/coge,asherkhb/coge,asherkhb/coge,LyonsLab/coge,asherkhb/coge,asherkhb/coge,asherkhb/coge,LyonsLab/coge,asherkhb/coge,LyonsLab/coge,LyonsLab/coge,asherkhb/coge,asherkhb/coge,LyonsLab/coge