Addresses #86 on refactor branch.
Addresses #86 on refactor branch.

BrendelGroup/AEGeAn,BrendelGroup/AEGeAn,BrendelGroup/AEGeAn,standage/AEGeAn,standage/AEGeAn,BrendelGroup/AEGeAn,standage/AEGeAn,standage/AEGeAn