Initial impl of interactions_only assembly for Phosphorylations
Initial impl of interactions_only assembly for Phosphorylations

The interactions_only "policy" specifies only the binding relationships
between proteins, which can subsequently be used to generate a contact
map which is useful for understanding the overall structure of the
network.

Phosphorylations are represented by a binding between the modified site
of the substrate and the kinase_site (active site) of the kinase.

johnbachman/belpy,bgyori/indra,sorgerlab/belpy,sorgerlab/belpy,sorgerlab/indra,johnbachman/indra,pvtodorov/indra,johnbachman/belpy,jmuhlich/indra,sorgerlab/belpy,johnbachman/indra,pvtodorov/indra,decarlin/indra,pvtodorov/indra,bgyori/indra,bgyori/indra,decarlin/indra,jmuhlich/indra,pvtodorov/indra,johnbachman/indra,sorgerlab/indra,sorgerlab/indra,decarlin/indra,johnbachman/belpy,jmuhlich/indra