Reduce strictness of arg parsing in Configure
Reduce strictness of arg parsing in Configure

Also put arg parsing before logging setup to allow args to modify logging.

jettisonjoe/openhtf,grybmadsci/openhtf,fahhem/openhtf,grybmadsci/openhtf,fahhem/openhtf,jettisonjoe/openhtf,ShaperTools/openhtf,google/openhtf,fahhem/openhtf,grybmadsci/openhtf,google/openhtf,ShaperTools/openhtf,jettisonjoe/openhtf,ShaperTools/openhtf,ShaperTools/openhtf,grybmadsci/openhtf,ShaperTools/openhtf,fahhem/openhtf,google/openhtf,amyxchen/openhtf,google/openhtf,jettisonjoe/openhtf,amyxchen/openhtf