align_families.py: Fix handling of stats, disable logging and --slurm. - fix stats counting to work across multiple processes. - properly count mafft-processed pairs, move counting up a function. - make the workers list just hold the pipes since that's all we need access to. - remove logging support until I make a multiprocess solution. - remove --slurm (user should use --ntasks instead).
align_families.py: Fix handling of stats, disable logging and --slurm.
- fix stats counting to work across multiple processes.
- properly count mafft-processed pairs, move counting up a function.
- make the workers list just hold the pipes since that's all we need access to.
- remove logging support until I make a multiprocess solution.
- remove --slurm (user should use --ntasks instead).

makrutenko/dunovo,makrutenko/dunovo,makrutenko/dunovo