Check whether pdep rates exceed high-P-limit
Check whether pdep rates exceed high-P-limit

While parsing a fame output file, I have added code to check whether
any of the pdep rates (within a given PDepNetwork) exceed their
high-P-limit rate.  In this case, "exceeding" means more than twice
the high-P-limit rate.  This tolerance can be tightened, at the expense
of the run-time.

If the rates are deemed a discrepancy, the number of grains (written
to the fame input file) is increased by 200 and fame is re-executed.
This continues until (a) the pdep rates are within a factor of 2 or
(b) the number of grains exceeds 1000, in which case we alert the user
of the discrepancy but continue the simulation with the results from
the previous fame run.

Before moving to the next fame calculation, the number of grains is
restored to 201.

nyee/RMG-Java,KEHANG/RMG-Java,ReactionMechanismGenerator/RMG-Java,faribas/RMG-Java,nyee/RMG-Java,rwest/RMG-Java,faribas/RMG-Java,rwest/RMG-Java,connie/RMG-Java,connie/RMG-Java,keceli/RMG-Java,nyee/RMG-Java,ReactionMechanismGenerator/RMG-Java,enochd/RMG-Java,enochd/RMG-Java,connie/RMG-Java,nyee/RMG-Java,KEHANG/RMG-Java,keceli/RMG-Java,connie/RMG-Java,enochd/RMG-Java,faribas/RMG-Java,nyee/RMG-Java,KEHANG/RMG-Java,keceli/RMG-Java,rwest/RMG-Java,ReactionMechanismGenerator/RMG-Java,keceli/RMG-Java,enochd/RMG-Java,faribas/RMG-Java,connie/RMG-Java,jwallen/RMG-Java,jwallen/RMG-Java,jwallen/RMG-Java,KEHANG/RMG-Java,jwallen/RMG-Java,ReactionMechanismGenerator/RMG-Java,KEHANG/RMG-Java,KEHANG/RMG-Java,jwallen/RMG-Java,nyee/RMG-Java,keceli/RMG-Java,jwallen/RMG-Java,rwest/RMG-Java,enochd/RMG-Java,keceli/RMG-Java,enochd/RMG-Java,rwest/RMG-Java,ReactionMechanismGenerator/RMG-Java