Some gfinisher runs produce a 'result_alternative.fasta', which generally seems to be more contiguous than the result1.fasta file, however does not always occur. We were using result_alternative.fasta, however this is not always generated so in these cases use result1.fasta instead
Some gfinisher runs produce a 'result_alternative.fasta', which generally seems to be more contiguous than the result1.fasta file, however does not always occur. We were using result_alternative.fasta, however this is not always generated so in these cases use result1.fasta instead

jamesabbott/BugBuilder,jamesabbott/BugBuilder,jamesabbott/BugBuilder