Add code to disable proper pair check. Clean up tabs vs spaces so we're consistant for the whole of bam_mate.c.
Add code to disable proper pair check.
Clean up tabs vs spaces so we're consistant for the whole of bam_mate.c.

mcshane/samtools,mcshane/samtools,mcshane/samtools,mcshane/samtools,mcshane/samtools,mcshane/samtools