Write HaplotypeCaller output to VariantCalling/HaplotypeCallerGVCF
Write HaplotypeCaller output to VariantCalling/HaplotypeCallerGVCF

instead of just VariantCalling/HaplotypeCaller to make it clear
which type of VCF is written.

szilvajuhos/CAW,marcelm/CAW,szilvajuhos/CAW,marcelm/CAW,szilvajuhos/CAW,marcelm/CAW