make the program could just re-aligne specific chromosome
make the program could just re-aligne specific chromosome

bioinformatics-centre/AsmVar,ShujiaHuang/AsmVar,ShujiaHuang/AsmVar,ShujiaHuang/AsmVar,ShujiaHuang/AsmVar,ShujiaHuang/AsmVar,bioinformatics-centre/AsmVar,bioinformatics-centre/AsmVar,ShujiaHuang/AsmVar,bioinformatics-centre/AsmVar,bioinformatics-centre/AsmVar,bioinformatics-centre/AsmVar