Downsample large whole genome input files during base quality recalibration to avoid long run times
Downsample large whole genome input files during base quality recalibration to avoid long run times

brainstorm/bcbio-nextgen,hjanime/bcbio-nextgen,brainstorm/bcbio-nextgen,fw1121/bcbio-nextgen,chapmanb/bcbio-nextgen,gifford-lab/bcbio-nextgen,biocyberman/bcbio-nextgen,mjafin/bcbio-nextgen,lpantano/bcbio-nextgen,hjanime/bcbio-nextgen,biocyberman/bcbio-nextgen,brainstorm/bcbio-nextgen,vladsaveliev/bcbio-nextgen,biocyberman/bcbio-nextgen,guillermo-carrasco/bcbio-nextgen,a113n/bcbio-nextgen,elkingtonmcb/bcbio-nextgen,fw1121/bcbio-nextgen,gifford-lab/bcbio-nextgen,chapmanb/bcbio-nextgen,Cyberbio-Lab/bcbio-nextgen,guillermo-carrasco/bcbio-nextgen,Cyberbio-Lab/bcbio-nextgen,verdurin/bcbio-nextgen,lbeltrame/bcbio-nextgen,SciLifeLab/bcbio-nextgen,lbeltrame/bcbio-nextgen,mjafin/bcbio-nextgen,lbeltrame/bcbio-nextgen,mjafin/bcbio-nextgen,fw1121/bcbio-nextgen,vladsaveliev/bcbio-nextgen,SciLifeLab/bcbio-nextgen,a113n/bcbio-nextgen,verdurin/bcbio-nextgen,SciLifeLab/bcbio-nextgen,Cyberbio-Lab/bcbio-nextgen,elkingtonmcb/bcbio-nextgen,gifford-lab/bcbio-nextgen,chapmanb/bcbio-nextgen,verdurin/bcbio-nextgen,guillermo-carrasco/bcbio-nextgen,vladsaveliev/bcbio-nextgen,a113n/bcbio-nextgen,hjanime/bcbio-nextgen,elkingtonmcb/bcbio-nextgen,lpantano/bcbio-nextgen,lpantano/bcbio-nextgen