Latest version of the gene tree pipeline. Now recursively breaks unresolved clusters (those that don't run neither muscle nor phyml). Don't use clustalw anymore, and incorporate the OrthoTree tree data flattening and missed duplication searches
Latest version of the gene tree pipeline. Now recursively breaks unresolved clusters (those that don't run neither muscle nor phyml). Don't use clustalw anymore, and incorporate the OrthoTree tree data flattening and missed duplication searches

ckongEbi/ensembl-compara,ckongEbi/ensembl-compara,danstaines/ensembl-compara,Ensembl/ensembl-compara,dbolser-ebi/ensembl-compara,etapanari/ensembl-compara,Ensembl/ensembl-compara,kumarsaurabh20/ensembl-compara,etapanari/ensembl-compara,Ensembl/ensembl-compara,etapanari/ensembl-compara,kumarsaurabh20/ensembl-compara,Ensembl/ensembl-compara,danstaines/ensembl-compara,kumarsaurabh20/ensembl-compara,dbolser-ebi/ensembl-compara,dbolser-ebi/ensembl-compara,danstaines/ensembl-compara,danstaines/ensembl-compara,Ensembl/ensembl-compara,ckongEbi/ensembl-compara,etapanari/ensembl-compara,kumarsaurabh20/ensembl-compara,Ensembl/ensembl-compara,Ensembl/ensembl-compara,Ensembl/ensembl-compara,danstaines/ensembl-compara