updating how _includes/command-line-usage.html is generated on the docs page: moving from virtual include to markdown include
updating how _includes/command-line-usage.html is generated on the docs
page: moving from virtual include to markdown include

see: https://github.com/broadinstitute/picard/issues/77

alecw/picard,nh13/picard,alecw/picard,nh13/picard,annkupi/picard,broadinstitute/picard,nh13/picard,alecw/picard,broadinstitute/picard,annkupi/picard,alecw/picard,broadinstitute/picard,nh13/picard,annkupi/picard,annkupi/picard,broadinstitute/picard,broadinstitute/picard