Added/tweaked Logger output.
Added/tweaked Logger output.

Needed tweaking.
Also note that there is no logger output here if you have GenerateReactions: ON
This should be fixed.

ReactionMechanismGenerator/RMG-Java,ReactionMechanismGenerator/RMG-Java,enochd/RMG-Java,nyee/RMG-Java,enochd/RMG-Java,jwallen/RMG-Java,nyee/RMG-Java,enochd/RMG-Java,enochd/RMG-Java,jwallen/RMG-Java,KEHANG/RMG-Java,keceli/RMG-Java,keceli/RMG-Java,connie/RMG-Java,faribas/RMG-Java,KEHANG/RMG-Java,connie/RMG-Java,jwallen/RMG-Java,jwallen/RMG-Java,nyee/RMG-Java,keceli/RMG-Java,ReactionMechanismGenerator/RMG-Java,faribas/RMG-Java,enochd/RMG-Java,keceli/RMG-Java,rwest/RMG-Java,keceli/RMG-Java,nyee/RMG-Java,nyee/RMG-Java,enochd/RMG-Java,rwest/RMG-Java,faribas/RMG-Java,ReactionMechanismGenerator/RMG-Java,connie/RMG-Java,ReactionMechanismGenerator/RMG-Java,rwest/RMG-Java,rwest/RMG-Java,rwest/RMG-Java,connie/RMG-Java,keceli/RMG-Java,jwallen/RMG-Java,faribas/RMG-Java,KEHANG/RMG-Java,KEHANG/RMG-Java,KEHANG/RMG-Java,nyee/RMG-Java,jwallen/RMG-Java,KEHANG/RMG-Java,connie/RMG-Java