Update to -M option
Update to -M option

-M option is updated so non-somatic variants will be soft-filtered by
setting FILTER flag using p-values, instead of hard filtering.  -M
option is intended if somatic mutations are of only interest.
Otherwise, default option is recommended and one can use STATUS info to
know whether a variant is somatic, germline, or LOH.

chapmanb/VarDict,chapmanb/VarDict,AstraZeneca-NGS/VarDict,chapmanb/VarDict,AstraZeneca-NGS/VarDict,AstraZeneca-NGS/VarDict