Update phar-packaged app layout.
Update phar-packaged app layout.

mehlah/lithium,davidpersson/lithium,wbeater/lithium,qoqa/lithium,pixelcog/lithium,whowgames/lithium,graphis/lithium,datachand/lithium,whowgames/lithium,m4rcsch/lithium-core-library,SensCritique/lithium,muyehub/lithium,SensCritique/lithium,muyehub/lithium,wbeater/lithium,graphis/lithium,jails/lithium,UnionOfRAD/lithium,m4rcsch/lithium-core-library,jails/lithium,datachand/lithium,qoqa/lithium,mehlah/lithium,UnionOfRAD/lithium,pixelcog/lithium,davidpersson/lithium