Modified chipSeqAnalyzeStep2.sh so that it includes the full path to bin/ sub-programs. This is not ideal and should probably be changed back at some point.
Modified chipSeqAnalyzeStep2.sh so that it includes the full path to bin/ sub-programs. This is not ideal and should probably be changed back at some point.

erinosb/chipSeqAutoAnalyzePipeline,erinosb/chipSeqAutoAnalyzePipeline