remove depreciated argument in edgeR function call glmLRT - the count table is no longer given as the first argument
remove depreciated argument in edgeR function call glmLRT - the count table is no longer given as the first argument

AntonioJBT/CGATPipeline_core,CGATOxford/CGATPipelines,AntonioJBT/CGATPipeline_core,AntonioJBT/CGATPipeline_core,CGATOxford/CGATPipelines,CGATOxford/CGATPipelines,AntonioJBT/CGATPipeline_core,CGATOxford/CGATPipelines,CGATOxford/CGATPipelines