Updating the manual to use the new names for things.
Updating the manual to use the new names for things.

Various parts of the raven install have been renamed, so this updates
the documentation.  Also, some of the build and test process have been updated.

joshua-cogliati-inl/raven,idaholab/raven,joshua-cogliati-inl/raven,idaholab/raven,joshua-cogliati-inl/raven,idaholab/raven,joshua-cogliati-inl/raven,idaholab/raven,joshua-cogliati-inl/raven,idaholab/raven,idaholab/raven,idaholab/raven,joshua-cogliati-inl/raven,joshua-cogliati-inl/raven