added a check for skipping sequences with only X and N in sub generate_fasta
added a check for skipping sequences with only X and N in sub generate_fasta

asherkhb/coge,LyonsLab/coge,asherkhb/coge,asherkhb/coge,asherkhb/coge,LyonsLab/coge,LyonsLab/coge,LyonsLab/coge,LyonsLab/coge,LyonsLab/coge,asherkhb/coge,asherkhb/coge,asherkhb/coge,asherkhb/coge,asherkhb/coge,LyonsLab/coge,LyonsLab/coge,LyonsLab/coge