Modify makefile to reflect additional git submodules
Modify makefile to reflect additional git submodules

ohsu-comp-bio/funnel,buchanae/funnel,buchanae/funnel,adamstruck/funnel,adamstruck/funnel,adamstruck/funnel,ohsu-comp-bio/funnel,buchanae/funnel,ohsu-comp-bio/funnel,ohsu-comp-bio/funnel,buchanae/funnel,adamstruck/funnel