Fixed the broken TrajWriter function
Fixed the broken TrajWriter function

Added a file (namdTraj.sh) to the main simulation directory that will search for successful trajectory files and combine them into a single file that can be viewed using VMD.  This replaces the broken TrajWriter function.

Former-commit-id: 3039147ade78c2757afc7ed31513b17b1592941d
westpa/westpa