First iteration of what I htink is a correctly formatted makefile. Future steps will be to programmatically generate pieces of makefile in this format for each STUDY_ASSAY combination that is defined by a list of unique study ID's (i.e. given a list of study ID's and the appropriate assay names for each, along with xcms parameters, I should be able to write out a makefile that processes each study appropriately
First iteration of what I htink is a correctly formatted makefile. Future steps will be to programmatically generate pieces of makefile in this format for each STUDY_ASSAY combination that is defined by a list of unique study ID's (i.e. given a list of study ID's and the appropriate assay names for each, along with xcms parameters, I should be able to write out a makefile that processes each study appropriately

irockafe/revo_healthcare,irockafe/revo_healthcare,irockafe/revo_healthcare