Account for insertion length in max MD ref calculation
Account for insertion length in max MD ref calculation

kyleabeauchamp/pysam,pysam-developers/pysam,pysam-developers/pysam,kyleabeauchamp/pysam,pysam-developers/pysam,pysam-developers/pysam,kyleabeauchamp/pysam,kyleabeauchamp/pysam,kyleabeauchamp/pysam