Small changes to gridengine batch system to use current directory,  and make it run more quietly.
Small changes to gridengine batch system to use current directory, 
and make it run more quietly.




git-svn-id: f7ac333d3f078fc2d8ea384f67eaebefe0f0ab5a@7369 a8237c23-d22b-0410-ac1a-db40f18c2caa

cooketho/jobTree,BD2KGenomics/toil-old,BD2KGenomics/slugflow,benedictpaten/jobTree,BD2KGenomics/slugflow,harvardinformatics/jobTree