added debugging lines to try to figure out why MM4 is hanging midway through optimization
added debugging lines to try to figure out why MM4 is hanging midway through optimization

examples where I have seen this occuring are PRHXUNDTCMNQSI-UHFFFAOYAX and WTNKNGDMXNJRPB-UHFFFAOYAT

enochd/RMG-Java,connie/RMG-Java,KEHANG/RMG-Java,ReactionMechanismGenerator/RMG-Java,KEHANG/RMG-Java,ReactionMechanismGenerator/RMG-Java,keceli/RMG-Java,ReactionMechanismGenerator/RMG-Java,connie/RMG-Java,connie/RMG-Java,keceli/RMG-Java,keceli/RMG-Java,KEHANG/RMG-Java,keceli/RMG-Java,KEHANG/RMG-Java,jwallen/RMG-Java,enochd/RMG-Java,ReactionMechanismGenerator/RMG-Java,nyee/RMG-Java,enochd/RMG-Java,rwest/RMG-Java,faribas/RMG-Java,jwallen/RMG-Java,jwallen/RMG-Java,nyee/RMG-Java,faribas/RMG-Java,connie/RMG-Java,nyee/RMG-Java,connie/RMG-Java,nyee/RMG-Java,jwallen/RMG-Java,rwest/RMG-Java,jwallen/RMG-Java,keceli/RMG-Java,rwest/RMG-Java,nyee/RMG-Java,faribas/RMG-Java,jwallen/RMG-Java,KEHANG/RMG-Java,enochd/RMG-Java,nyee/RMG-Java,enochd/RMG-Java,KEHANG/RMG-Java,enochd/RMG-Java,rwest/RMG-Java,rwest/RMG-Java,keceli/RMG-Java,faribas/RMG-Java,ReactionMechanismGenerator/RMG-Java