configure.ac: Remove unused directories from doxygen calculation.
configure.ac: Remove unused directories from doxygen calculation.

b1v1r/ironbee,b1v1r/ironbee,ironbee/ironbee,ironbee/ironbee,b1v1r/ironbee,b1v1r/ironbee,b1v1r/ironbee,ironbee/ironbee,b1v1r/ironbee,ironbee/ironbee,ironbee/ironbee,b1v1r/ironbee,b1v1r/ironbee,ironbee/ironbee,b1v1r/ironbee,ironbee/ironbee,b1v1r/ironbee,b1v1r/ironbee,b1v1r/ironbee,ironbee/ironbee,ironbee/ironbee,ironbee/ironbee,ironbee/ironbee,ironbee/ironbee