updated for new PAML version
updated for new PAML version

CGATOxford/CGATPipelines,CGATOxford/CGATPipelines,AntonioJBT/CGATPipeline_core,CGATOxford/CGATPipelines,CGATOxford/CGATPipelines,CGATOxford/CGATPipelines,AntonioJBT/CGATPipeline_core,AntonioJBT/CGATPipeline_core,AntonioJBT/CGATPipeline_core