2/13/09 gmagoon: fixing a bug in symmetry number estimation: matchedGC was being modified in thermo matching, which was messing up subsequent symmetry number estimation; also adding functions for gauche and 1,5 interactions
2/13/09 gmagoon: fixing a bug in symmetry number estimation: matchedGC was being modified in thermo matching, which was messing up subsequent symmetry number estimation; also adding functions for gauche and 1,5 interactions

KEHANG/RMG-Java,KEHANG/RMG-Java,keceli/RMG-Java,enochd/RMG-Java,rwest/RMG-Java,rwest/RMG-Java,connie/RMG-Java,faribas/RMG-Java,connie/RMG-Java,ReactionMechanismGenerator/RMG-Java,rwest/RMG-Java,KEHANG/RMG-Java,faribas/RMG-Java,nyee/RMG-Java,jwallen/RMG-Java,ReactionMechanismGenerator/RMG-Java,jwallen/RMG-Java,rwest/RMG-Java,nyee/RMG-Java,ReactionMechanismGenerator/RMG-Java,keceli/RMG-Java,keceli/RMG-Java,nyee/RMG-Java,faribas/RMG-Java,connie/RMG-Java,keceli/RMG-Java,nyee/RMG-Java,ReactionMechanismGenerator/RMG-Java,enochd/RMG-Java,enochd/RMG-Java,connie/RMG-Java,connie/RMG-Java,jwallen/RMG-Java,nyee/RMG-Java,enochd/RMG-Java,jwallen/RMG-Java,KEHANG/RMG-Java,jwallen/RMG-Java,nyee/RMG-Java,ReactionMechanismGenerator/RMG-Java,faribas/RMG-Java,jwallen/RMG-Java,enochd/RMG-Java,keceli/RMG-Java,enochd/RMG-Java,KEHANG/RMG-Java,KEHANG/RMG-Java,rwest/RMG-Java,keceli/RMG-Java