tiny fix to Paul's fix to runAll scripts: sort -u is a tiny bit better than uniq because you can't guarantee that alignments with the same patient will be adjacent
tiny fix to Paul's fix to runAll scripts: sort -u is a tiny bit better than uniq because you can't guarantee that alignments with the same patient will be adjacent

pedlefsen/hiv-founder-id,pedlefsen/hiv-founder-id,pedlefsen/hiv-founder-id