Revert "modified gap clustering to use a predefined tiling path of contigs to select the consensus call per subgraph from."
Revert "modified gap clustering to use a predefined tiling path of contigs to select the consensus call per subgraph from."

This reverts commit 8bfc668f87e794455eeab24c1b357015815f2252.

EichlerLab/pacbio_variant_caller,EichlerLab/pacbio_variant_caller,EichlerLab/pacbio_variant_caller,EichlerLab/pacbio_variant_caller,EichlerLab/pacbio_variant_caller