Adding the Spackler class used for the loops benchmark to add residue back into the PDB structure. The functions currently allow missing backbone N, CA, and C atoms to be added back between two residues. These residues are added almost in a straight line and equidistantly. For technical reasons, they cannot be added in a straight line (from the Rosetta mailing list: "the dihedral angle over 4 colinear atoms is undefined") so they are pushed out somewhat from the plane.
Adding the Spackler class used for the loops benchmark to add residue back into the PDB structure.
The functions currently allow missing backbone N, CA, and C atoms to be added back between two residues. These residues are added almost in a straight line and equidistantly.
For technical reasons, they cannot be added in a straight line (from the Rosetta mailing list: "the dihedral angle over 4 colinear atoms is undefined") so they are pushed out somewhat from the plane.

Kortemme-Lab/klab,Kortemme-Lab/klab,Kortemme-Lab/klab,Kortemme-Lab/klab