Fixes to thes pbs send script
Fixes to thes pbs send script

util/pbs/send.py:
    - add a -d to set the job root directory allowing one to run
    send.py from anywhere.
    - specify full paths to files instead of relative paths to make -d
    work and to allow ssh qsub to work again.
    - make the Link directory only copy links that point to regular files.

haowu4682/gem5,andrewfu0325/gem5-aladdin,andrewfu0325/gem5-aladdin,haowu4682/gem5,andrewfu0325/gem5-aladdin,LingxiaoJIA/gem5,haowu4682/gem5,andrewfu0325/gem5-aladdin,LingxiaoJIA/gem5,LingxiaoJIA/gem5,haowu4682/gem5,andrewfu0325/gem5-aladdin,LingxiaoJIA/gem5,andrewfu0325/gem5-aladdin,haowu4682/gem5,LingxiaoJIA/gem5,haowu4682/gem5,haowu4682/gem5,haowu4682/gem5,LingxiaoJIA/gem5,haowu4682/gem5,LingxiaoJIA/gem5,andrewfu0325/gem5-aladdin