revert biojava for PDB only until we can update the code
revert biojava for PDB only until we can update the code


Former-commit-id: dab9ff4b9dda8be5cbba6a545c1971696f4c53d7
julie-sullivan/phytomine,julie-sullivan/phytomine,julie-sullivan/phytomine,julie-sullivan/phytomine,julie-sullivan/phytomine,julie-sullivan/phytomine,julie-sullivan/phytomine