Updating all applications to remove the need for legacy include paths - closes idaholab/relap-7#1723
Updating all applications to remove the need for legacy include paths - closes idaholab/relap-7#1723

r16728

jessecarterMOOSE/moose,laagesen/moose,bwspenc/moose,milljm/moose,dschwen/moose,idaholab/moose,milljm/moose,harterj/moose,laagesen/moose,milljm/moose,andrsd/moose,bwspenc/moose,andrsd/moose,idaholab/moose,dschwen/moose,andrsd/moose,laagesen/moose,jessecarterMOOSE/moose,jessecarterMOOSE/moose,harterj/moose,jessecarterMOOSE/moose,lindsayad/moose,harterj/moose,sapitts/moose,bwspenc/moose,idaholab/moose,sapitts/moose,lindsayad/moose,bwspenc/moose,lindsayad/moose,sapitts/moose,milljm/moose,laagesen/moose,sapitts/moose,harterj/moose,lindsayad/moose,milljm/moose,harterj/moose,dschwen/moose,lindsayad/moose,idaholab/moose,jessecarterMOOSE/moose,dschwen/moose,bwspenc/moose,sapitts/moose,andrsd/moose,andrsd/moose,idaholab/moose,dschwen/moose,laagesen/moose