INST: fixed some basic issues and now use all cpu for itk scripts
INST: fixed some basic issues and now use all cpu for itk scripts

3324fr/spinalcordtoolbox,3324fr/spinalcordtoolbox,3324fr/spinalcordtoolbox,3324fr/spinalcordtoolbox,3324fr/spinalcordtoolbox,3324fr/spinalcordtoolbox,3324fr/spinalcordtoolbox