Update align.py
Update align.py

Fixes #104, for consistancy's sake
CVML/pycortex,gallantlab/pycortex,gallantlab/pycortex,CVML/pycortex,gallantlab/pycortex,smerdis/pycortex,smerdis/pycortex,smerdis/pycortex,smerdis/pycortex,CVML/pycortex,smerdis/pycortex,CVML/pycortex,gallantlab/pycortex,CVML/pycortex,gallantlab/pycortex