
The following patch brings the MANIFEST file up-to-date with recent
additions.  I haven't committed this in case some other reorganization
(e.g. moving stuff to a src/ or dev/ or doc/ directory) is underway.

There are also a few minor shuffles as I've re-sorted the MANIFEST.

    Andy Dougherty              doughera@lafayette.edu


git-svn-id: 6e74a02f85675cec270f5d931b0f6998666294a3@1858 d31e2699-5ff4-0310-a27c-f18f2fbe73fe

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